EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000009884 (Gene tree)
Gene ID: -
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4992 bases
Position: chrCCOE01001720.1:9639-14630
Accession: ZDB-GENE-050522-251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000012752	RNA_pol_I_A49	PF06870.12	1.1e-100	1	1
ENSACIP00000012777	RNA_pol_I_A49	PF06870.12	3.8e-96	1	2
ENSACIP00000012777	RNA_pol_I_A49	PF06870.12	3.8e-96	2	2
ENSACIP00000012715	RNA_pol_I_A49	PF06870.12	2.3e-93	1	1
ENSACIP00000012790	RNA_pol_I_A49	PF06870.12	5.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000013107	-	1203	-	ENSACIP00000012752	400 (aa)	-	-
ENSACIT00000013070	-	1185	-	ENSACIP00000012715	394 (aa)	-	-
ENSACIT00000013148	-	438	-	ENSACIP00000012790	145 (aa)	-	-
ENSACIT00000013135	-	1101	-	ENSACIP00000012777	366 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009884	polr1e	98	43.257	ENSG00000137054	POLR1E	94	42.680	Homo_sapiens
ENSACIG00000009884	polr1e	99	69.054	ENSAPOG00000012452	polr1e	96	68.548	Acanthochromis_polyacanthus
ENSACIG00000009884	polr1e	99	60.465	ENSAMEG00000010193	POLR1E	77	60.465	Ailuropoda_melanoleuca
ENSACIG00000009884	polr1e	99	74.555	ENSAOCG00000005665	polr1e	100	71.154	Amphiprion_ocellaris
ENSACIG00000009884	polr1e	99	75.064	ENSAPEG00000020581	polr1e	100	71.394	Amphiprion_percula
ENSACIG00000009884	polr1e	99	74.300	ENSATEG00000020609	polr1e	100	69.471	Anabas_testudineus
ENSACIG00000009884	polr1e	76	44.097	ENSAPLG00000010340	POLR1E	99	38.058	Anas_platyrhynchos
ENSACIG00000009884	polr1e	99	42.893	ENSANAG00000038046	POLR1E	94	42.222	Aotus_nancymaae
ENSACIG00000009884	polr1e	99	83.715	ENSACLG00000013685	polr1e	94	83.715	Astatotilapia_calliptera
ENSACIG00000009884	polr1e	99	56.154	ENSAMXG00000018181	polr1e	94	56.154	Astyanax_mexicanus
ENSACIG00000009884	polr1e	99	44.670	ENSBTAG00000012243	POLR1E	93	44.670	Bos_taurus
ENSACIG00000009884	polr1e	98	41.176	ENSCJAG00000010512	POLR1E	91	42.779	Callithrix_jacchus
ENSACIG00000009884	polr1e	99	43.401	ENSCAFG00000002377	POLR1E	94	43.069	Canis_familiaris
ENSACIG00000009884	polr1e	99	43.401	ENSCAFG00020017851	POLR1E	94	43.317	Canis_lupus_dingo
ENSACIG00000009884	polr1e	99	44.670	ENSCHIG00000019479	POLR1E	93	44.670	Capra_hircus
ENSACIG00000009884	polr1e	99	43.655	ENSTSYG00000002075	POLR1E	94	43.069	Carlito_syrichta
ENSACIG00000009884	polr1e	77	43.793	ENSCAPG00000015653	POLR1E	99	43.793	Cavia_aperea
ENSACIG00000009884	polr1e	99	44.750	ENSCPOG00000009965	POLR1E	94	44.913	Cavia_porcellus
ENSACIG00000009884	polr1e	98	40.591	ENSCCAG00000029460	POLR1E	93	40.591	Cebus_capucinus
ENSACIG00000009884	polr1e	98	42.748	ENSCATG00000031732	POLR1E	92	54.545	Cercocebus_atys
ENSACIG00000009884	polr1e	85	46.903	ENSCLAG00000012701	POLR1E	89	46.903	Chinchilla_lanigera
ENSACIG00000009884	polr1e	98	42.748	ENSCSAG00000010782	POLR1E	94	42.929	Chlorocebus_sabaeus
ENSACIG00000009884	polr1e	99	38.071	ENSCHOG00000013024	POLR1E	85	37.346	Choloepus_hoffmanni
ENSACIG00000009884	polr1e	99	46.819	ENSCPBG00000006923	POLR1E	94	47.074	Chrysemys_picta_bellii
ENSACIG00000009884	polr1e	98	43.257	ENSCANG00000036112	POLR1E	92	53.261	Colobus_angolensis_palliatus
ENSACIG00000009884	polr1e	99	42.785	ENSCGRG00001006197	Polr1e	91	42.857	Cricetulus_griseus_chok1gshd
ENSACIG00000009884	polr1e	99	42.532	ENSCGRG00000006430	Polr1e	91	42.611	Cricetulus_griseus_crigri
ENSACIG00000009884	polr1e	99	66.324	ENSCSEG00000005121	polr1e	95	66.324	Cynoglossus_semilaevis
ENSACIG00000009884	polr1e	99	72.449	ENSCVAG00000019759	polr1e	100	66.507	Cyprinodon_variegatus
ENSACIG00000009884	polr1e	96	55.789	ENSDARG00000006434	polr1e	100	52.518	Danio_rerio
ENSACIG00000009884	polr1e	99	54.839	ENSDNOG00000010257	POLR1E	81	54.839	Dasypus_novemcinctus
ENSACIG00000009884	polr1e	62	56.667	ENSDORG00000026463	-	75	50.962	Dipodomys_ordii
ENSACIG00000009884	polr1e	89	41.341	ENSETEG00000018204	POLR1E	99	41.620	Echinops_telfairi
ENSACIG00000009884	polr1e	83	31.529	ENSEBUG00000010635	-	95	32.166	Eptatretus_burgeri
ENSACIG00000009884	polr1e	99	43.655	ENSEASG00005000675	POLR1E	94	43.704	Equus_asinus_asinus
ENSACIG00000009884	polr1e	99	43.655	ENSECAG00000014669	POLR1E	94	43.457	Equus_caballus
ENSACIG00000009884	polr1e	99	39.386	ENSEEUG00000011928	POLR1E	83	39.386	Erinaceus_europaeus
ENSACIG00000009884	polr1e	99	64.194	ENSELUG00000008150	polr1e	99	59.135	Esox_lucius
ENSACIG00000009884	polr1e	99	43.655	ENSFCAG00000013081	POLR1E	94	42.752	Felis_catus
ENSACIG00000009884	polr1e	99	44.670	ENSFALG00000012950	POLR1E	98	44.670	Ficedula_albicollis
ENSACIG00000009884	polr1e	99	46.154	ENSFDAG00000016917	POLR1E	94	46.154	Fukomys_damarensis
ENSACIG00000009884	polr1e	99	69.211	ENSFHEG00000009801	polr1e	100	64.029	Fundulus_heteroclitus
ENSACIG00000009884	polr1e	99	54.881	ENSGMOG00000003336	POLR1E	94	54.881	Gadus_morhua
ENSACIG00000009884	polr1e	99	46.193	ENSGALG00000005395	POLR1E	95	46.193	Gallus_gallus
ENSACIG00000009884	polr1e	99	68.367	ENSGAFG00000004850	polr1e	100	64.833	Gambusia_affinis
ENSACIG00000009884	polr1e	99	64.394	ENSGACG00000016087	polr1e	100	61.814	Gasterosteus_aculeatus
ENSACIG00000009884	polr1e	99	45.867	ENSGAGG00000001659	POLR1E	97	44.772	Gopherus_agassizii
ENSACIG00000009884	polr1e	98	43.257	ENSGGOG00000001882	POLR1E	92	54.545	Gorilla_gorilla
ENSACIG00000009884	polr1e	99	83.715	ENSHBUG00000002559	polr1e	94	83.715	Haplochromis_burtoni
ENSACIG00000009884	polr1e	99	45.685	ENSHGLG00000002036	POLR1E	94	45.685	Heterocephalus_glaber_female
ENSACIG00000009884	polr1e	99	45.939	ENSHGLG00100012784	POLR1E	94	45.939	Heterocephalus_glaber_male
ENSACIG00000009884	polr1e	99	67.775	ENSHCOG00000002774	polr1e	100	63.095	Hippocampus_comes
ENSACIG00000009884	polr1e	99	53.985	ENSIPUG00000003019	polr1e	94	53.985	Ictalurus_punctatus
ENSACIG00000009884	polr1e	99	44.246	ENSSTOG00000009810	POLR1E	94	45.939	Ictidomys_tridecemlineatus
ENSACIG00000009884	polr1e	99	44.924	ENSJJAG00000020731	Polr1e	90	44.924	Jaculus_jaculus
ENSACIG00000009884	polr1e	99	72.265	ENSKMAG00000000046	polr1e	100	67.943	Kryptolebias_marmoratus
ENSACIG00000009884	polr1e	99	71.429	ENSLBEG00000003104	polr1e	99	66.187	Labrus_bergylta
ENSACIG00000009884	polr1e	90	49.454	ENSLACG00000003416	POLR1E	99	49.454	Latimeria_chalumnae
ENSACIG00000009884	polr1e	99	51.523	ENSLOCG00000012859	polr1e	94	52.273	Lepisosteus_oculatus
ENSACIG00000009884	polr1e	98	55.789	ENSLAFG00000012831	POLR1E	93	44.304	Loxodonta_africana
ENSACIG00000009884	polr1e	98	43.003	ENSMFAG00000045465	POLR1E	92	54.545	Macaca_fascicularis
ENSACIG00000009884	polr1e	98	42.748	ENSMMUG00000017892	POLR1E	92	54.545	Macaca_mulatta
ENSACIG00000009884	polr1e	98	40.050	ENSMNEG00000040283	POLR1E	84	55.172	Macaca_nemestrina
ENSACIG00000009884	polr1e	98	42.748	ENSMLEG00000031135	POLR1E	92	54.545	Mandrillus_leucophaeus
ENSACIG00000009884	polr1e	99	70.918	ENSMAMG00000001260	polr1e	99	65.707	Mastacembelus_armatus
ENSACIG00000009884	polr1e	99	83.969	ENSMZEG00005021536	polr1e	94	83.969	Maylandia_zebra
ENSACIG00000009884	polr1e	99	43.401	ENSMAUG00000021044	Polr1e	91	43.457	Mesocricetus_auratus
ENSACIG00000009884	polr1e	99	44.162	ENSMICG00000003673	POLR1E	94	43.317	Microcebus_murinus
ENSACIG00000009884	polr1e	99	42.278	ENSMOCG00000012920	Polr1e	91	42.118	Microtus_ochrogaster
ENSACIG00000009884	polr1e	99	71.827	ENSMMOG00000007391	polr1e	100	68.932	Mola_mola
ENSACIG00000009884	polr1e	95	45.383	ENSMODG00000002884	POLR1E	92	45.383	Monodelphis_domestica
ENSACIG00000009884	polr1e	99	72.774	ENSMALG00000002665	polr1e	99	69.378	Monopterus_albus
ENSACIG00000009884	polr1e	99	53.488	MGP_CAROLIEiJ_G0025967	Polr1e	97	41.878	Mus_caroli
ENSACIG00000009884	polr1e	99	55.814	ENSMUSG00000028318	Polr1e	99	41.827	Mus_musculus
ENSACIG00000009884	polr1e	99	56.977	MGP_PahariEiJ_G0024114	Polr1e	97	43.596	Mus_pahari
ENSACIG00000009884	polr1e	99	55.814	MGP_SPRETEiJ_G0026930	Polr1e	97	43.467	Mus_spretus
ENSACIG00000009884	polr1e	99	56.701	ENSMPUG00000006040	POLR1E	81	56.701	Mustela_putorius_furo
ENSACIG00000009884	polr1e	99	44.924	ENSMLUG00000012688	POLR1E	91	44.059	Myotis_lucifugus
ENSACIG00000009884	polr1e	99	44.162	ENSNGAG00000002520	Polr1e	91	43.564	Nannospalax_galili
ENSACIG00000009884	polr1e	99	83.969	ENSNBRG00000016822	polr1e	94	83.969	Neolamprologus_brichardi
ENSACIG00000009884	polr1e	98	43.003	ENSNLEG00000003616	POLR1E	92	54.545	Nomascus_leucogenys
ENSACIG00000009884	polr1e	76	50.455	ENSMEUG00000015372	-	79	50.455	Notamacropus_eugenii
ENSACIG00000009884	polr1e	90	38.187	ENSOPRG00000014206	POLR1E	99	38.187	Ochotona_princeps
ENSACIG00000009884	polr1e	99	45.431	ENSODEG00000014565	POLR1E	91	45.431	Octodon_degus
ENSACIG00000009884	polr1e	99	83.969	ENSONIG00000008921	polr1e	94	83.969	Oreochromis_niloticus
ENSACIG00000009884	polr1e	76	51.818	ENSOANG00000021091	-	82	56.790	Ornithorhynchus_anatinus
ENSACIG00000009884	polr1e	99	43.401	ENSOCUG00000024773	POLR1E	94	43.276	Oryctolagus_cuniculus
ENSACIG00000009884	polr1e	99	68.448	ENSORLG00000005143	polr1e	100	64.115	Oryzias_latipes
ENSACIG00000009884	polr1e	99	71.507	ENSORLG00020007271	polr1e	99	71.507	Oryzias_latipes_hni
ENSACIG00000009884	polr1e	99	68.448	ENSORLG00015000137	polr1e	100	64.115	Oryzias_latipes_hsok
ENSACIG00000009884	polr1e	99	66.412	ENSOMEG00000013264	polr1e	98	62.019	Oryzias_melastigma
ENSACIG00000009884	polr1e	99	42.893	ENSOGAG00000012981	POLR1E	92	42.327	Otolemur_garnettii
ENSACIG00000009884	polr1e	99	44.924	ENSOARG00000011465	POLR1E	90	44.924	Ovis_aries
ENSACIG00000009884	polr1e	98	43.257	ENSPPAG00000034566	POLR1E	92	54.545	Pan_paniscus
ENSACIG00000009884	polr1e	98	44.275	ENSPPRG00000005649	POLR1E	94	43.564	Panthera_pardus
ENSACIG00000009884	polr1e	98	44.275	ENSPTIG00000009774	POLR1E	94	43.735	Panthera_tigris_altaica
ENSACIG00000009884	polr1e	98	43.257	ENSPTRG00000020944	POLR1E	92	54.545	Pan_troglodytes
ENSACIG00000009884	polr1e	98	42.748	ENSPANG00000025563	POLR1E	92	54.545	Papio_anubis
ENSACIG00000009884	polr1e	99	55.980	ENSPKIG00000003562	polr1e	99	51.781	Paramormyrops_kingsleyae
ENSACIG00000009884	polr1e	99	43.655	ENSPSIG00000003274	POLR1E	91	44.388	Pelodiscus_sinensis
ENSACIG00000009884	polr1e	99	63.590	ENSPMGG00000024169	polr1e	99	62.155	Periophthalmus_magnuspinnatus
ENSACIG00000009884	polr1e	99	42.640	ENSPEMG00000019151	-	91	42.469	Peromyscus_maniculatus_bairdii
ENSACIG00000009884	polr1e	99	38.070	ENSPEMG00000022300	-	90	38.402	Peromyscus_maniculatus_bairdii
ENSACIG00000009884	polr1e	99	45.663	ENSPCIG00000014798	POLR1E	95	44.776	Phascolarctos_cinereus
ENSACIG00000009884	polr1e	99	66.268	ENSPFOG00000019627	polr1e	99	62.302	Poecilia_formosa
ENSACIG00000009884	polr1e	99	70.408	ENSPLAG00000022679	polr1e	100	66.268	Poecilia_latipinna
ENSACIG00000009884	polr1e	91	71.031	ENSPMEG00000022123	polr1e	93	71.031	Poecilia_mexicana
ENSACIG00000009884	polr1e	99	68.622	ENSPREG00000009470	polr1e	100	65.072	Poecilia_reticulata
ENSACIG00000009884	polr1e	98	42.748	ENSPPYG00000019061	POLR1E	94	42.184	Pongo_abelii
ENSACIG00000009884	polr1e	60	38.559	ENSPCAG00000004891	POLR1E	76	38.559	Procavia_capensis
ENSACIG00000009884	polr1e	98	43.766	ENSPCOG00000027448	POLR1E	94	42.928	Propithecus_coquereli
ENSACIG00000009884	polr1e	99	44.162	ENSPVAG00000007940	POLR1E	83	43.457	Pteropus_vampyrus
ENSACIG00000009884	polr1e	99	83.461	ENSPNYG00000001032	polr1e	94	83.461	Pundamilia_nyererei
ENSACIG00000009884	polr1e	99	55.754	ENSPNAG00000006987	polr1e	94	55.754	Pygocentrus_nattereri
ENSACIG00000009884	polr1e	99	42.386	ENSRNOG00000012664	Polr1e	91	42.469	Rattus_norvegicus
ENSACIG00000009884	polr1e	98	43.003	ENSRBIG00000034214	POLR1E	99	42.895	Rhinopithecus_bieti
ENSACIG00000009884	polr1e	98	42.748	ENSRROG00000031986	POLR1E	92	54.545	Rhinopithecus_roxellana
ENSACIG00000009884	polr1e	98	42.494	ENSSBOG00000021415	POLR1E	94	41.935	Saimiri_boliviensis_boliviensis
ENSACIG00000009884	polr1e	86	46.705	ENSSHAG00000016084	POLR1E	95	46.705	Sarcophilus_harrisii
ENSACIG00000009884	polr1e	99	58.629	ENSSFOG00015002293	polr1e	94	58.629	Scleropages_formosus
ENSACIG00000009884	polr1e	99	74.425	ENSSMAG00000011672	polr1e	93	69.784	Scophthalmus_maximus
ENSACIG00000009884	polr1e	99	73.791	ENSSDUG00000022279	polr1e	99	70.096	Seriola_dumerili
ENSACIG00000009884	polr1e	99	72.519	ENSSLDG00000024918	polr1e	99	68.900	Seriola_lalandi_dorsalis
ENSACIG00000009884	polr1e	61	41.810	ENSSARG00000009810	-	58	41.810	Sorex_araneus
ENSACIG00000009884	polr1e	99	44.162	ENSSPUG00000009499	POLR1E	95	45.113	Sphenodon_punctatus
ENSACIG00000009884	polr1e	99	74.490	ENSSPAG00000021240	polr1e	100	69.856	Stegastes_partitus
ENSACIG00000009884	polr1e	99	43.655	ENSSSCG00000005347	POLR1E	94	42.822	Sus_scrofa
ENSACIG00000009884	polr1e	99	48.485	ENSTGUG00000007169	POLR1E	99	36.784	Taeniopygia_guttata
ENSACIG00000009884	polr1e	99	67.089	ENSTRUG00000020779	polr1e	99	66.842	Takifugu_rubripes
ENSACIG00000009884	polr1e	99	68.448	ENSTNIG00000017812	polr1e	99	64.029	Tetraodon_nigroviridis
ENSACIG00000009884	polr1e	99	44.670	ENSTBEG00000013786	POLR1E	86	43.510	Tupaia_belangeri
ENSACIG00000009884	polr1e	99	43.325	ENSTTRG00000008294	POLR1E	85	42.506	Tursiops_truncatus
ENSACIG00000009884	polr1e	99	44.697	ENSUAMG00000012474	POLR1E	92	46.628	Ursus_americanus
ENSACIG00000009884	polr1e	99	44.444	ENSUMAG00000011496	POLR1E	94	43.812	Ursus_maritimus
ENSACIG00000009884	polr1e	85	40.413	ENSVPAG00000009048	POLR1E	82	41.026	Vicugna_pacos
ENSACIG00000009884	polr1e	99	43.401	ENSVVUG00000019954	POLR1E	94	43.317	Vulpes_vulpes
ENSACIG00000009884	polr1e	99	41.814	ENSXETG00000006533	polr1e	95	41.709	Xenopus_tropicalis
ENSACIG00000009884	polr1e	99	70.419	ENSXCOG00000013706	polr1e	100	64.720	Xiphophorus_couchianus
ENSACIG00000009884	polr1e	99	70.663	ENSXMAG00000012484	polr1e	100	66.746	Xiphophorus_maculatus