EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000009946 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5719 bases
Position: chrCCOE01001614.1:22905-28623
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000012738	RVT_1	PF00078.27	1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000013093	-	753	-	ENSACIP00000012738	250 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000009946	-	79	32.195	ENSACIG00000002047	-	78	32.195
ENSACIG00000009946	-	70	33.333	ENSACIG00000002701	-	70	33.333
ENSACIG00000009946	-	72	33.696	ENSACIG00000017535	-	72	33.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009946	-	72	44.444	ENSHCOG00000007511	-	77	44.444	Hippocampus_comes
ENSACIG00000009946	-	54	33.577	ENSIPUG00000009841	-	55	33.577	Ictalurus_punctatus
ENSACIG00000009946	-	61	41.176	ENSLACG00000015520	-	100	41.176	Latimeria_chalumnae
ENSACIG00000009946	-	52	35.606	ENSOMEG00000008264	-	59	35.338	Oryzias_melastigma