EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000010653 (Gene tree)
Gene ID: -
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: APEX nuclease (multifunctional DNA repair enzyme) 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2175 bases
Position: chrCCOE01000838.1:738445-740619
Accession: ZDB-GENE-040426-2761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000013690	Exo_endo_phos	PF03372.23	5.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000014060	-	891	-	ENSACIP00000013690	296 (aa)	-	-

Gene Model

Click here to download ENSACIG00000010653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000010653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000010653	apex1	94	71.326	ENSG00000100823	APEX1	99	59.649	Homo_sapiens
ENSACIG00000010653	apex1	95	90.357	ENSAPOG00000017002	apex1	91	90.253	Acanthochromis_polyacanthus
ENSACIG00000010653	apex1	94	70.609	ENSAMEG00000005418	APEX1	87	71.014	Ailuropoda_melanoleuca
ENSACIG00000010653	apex1	95	90.357	ENSAOCG00000009649	apex1	90	90.253	Amphiprion_ocellaris
ENSACIG00000010653	apex1	95	90.714	ENSAPEG00000021453	apex1	90	90.614	Amphiprion_percula
ENSACIG00000010653	apex1	93	91.971	ENSATEG00000002883	apex1	87	92.029	Anabas_testudineus
ENSACIG00000010653	apex1	95	74.286	ENSACAG00000008099	APEX1	87	74.729	Anolis_carolinensis
ENSACIG00000010653	apex1	94	71.685	ENSANAG00000030117	APEX1	87	71.583	Aotus_nancymaae
ENSACIG00000010653	apex1	93	94.182	ENSACLG00000018441	apex1	89	94.224	Astatotilapia_calliptera
ENSACIG00000010653	apex1	98	88.014	ENSAMXG00000034699	apex1	89	88.448	Astyanax_mexicanus
ENSACIG00000010653	apex1	94	70.251	ENSBTAG00000002745	APEX1	87	70.652	Bos_taurus
ENSACIG00000010653	apex1	95	45.105	WBGene00001372	exo-3	92	46.442	Caenorhabditis_elegans
ENSACIG00000010653	apex1	94	71.685	ENSCJAG00000009726	APEX1	87	71.583	Callithrix_jacchus
ENSACIG00000010653	apex1	94	71.326	ENSCAFG00000032033	APEX1	87	71.223	Canis_familiaris
ENSACIG00000010653	apex1	94	71.326	ENSCAFG00020014377	-	87	71.223	Canis_lupus_dingo
ENSACIG00000010653	apex1	94	70.251	ENSCHIG00000007298	-	87	70.652	Capra_hircus
ENSACIG00000010653	apex1	94	56.475	ENSCHIG00000014537	-	89	56.475	Capra_hircus
ENSACIG00000010653	apex1	97	68.858	ENSTSYG00000034813	APEX1	87	69.784	Carlito_syrichta
ENSACIG00000010653	apex1	97	63.448	ENSCAPG00000016235	APEX1	91	71.610	Cavia_aperea
ENSACIG00000010653	apex1	98	69.759	ENSCPOG00000030909	APEX1	87	71.223	Cavia_porcellus
ENSACIG00000010653	apex1	94	71.685	ENSCCAG00000033056	-	87	71.583	Cebus_capucinus
ENSACIG00000010653	apex1	94	61.290	ENSCCAG00000031931	-	87	61.151	Cebus_capucinus
ENSACIG00000010653	apex1	97	69.896	ENSCATG00000015580	APEX1	87	70.863	Cercocebus_atys
ENSACIG00000010653	apex1	97	70.242	ENSCLAG00000001002	APEX1	87	71.223	Chinchilla_lanigera
ENSACIG00000010653	apex1	97	70.242	ENSCSAG00000016670	-	87	71.223	Chlorocebus_sabaeus
ENSACIG00000010653	apex1	97	70.242	ENSCSAG00000016685	-	87	71.223	Chlorocebus_sabaeus
ENSACIG00000010653	apex1	96	75.265	ENSCPBG00000009567	APEX1	87	75.812	Chrysemys_picta_bellii
ENSACIG00000010653	apex1	90	61.049	ENSCING00000008137	-	85	61.049	Ciona_intestinalis
ENSACIG00000010653	apex1	90	53.731	ENSCSAVG00000007144	-	100	55.426	Ciona_savignyi
ENSACIG00000010653	apex1	97	70.242	ENSCANG00000030726	APEX1	87	71.223	Colobus_angolensis_palliatus
ENSACIG00000010653	apex1	97	69.204	ENSCGRG00001017046	Apex1	88	70.144	Cricetulus_griseus_chok1gshd
ENSACIG00000010653	apex1	97	69.204	ENSCGRG00000008984	Apex1	88	70.144	Cricetulus_griseus_crigri
ENSACIG00000010653	apex1	98	87.285	ENSCSEG00000017499	apex1	89	88.087	Cynoglossus_semilaevis
ENSACIG00000010653	apex1	95	93.214	ENSCVAG00000022075	apex1	89	93.141	Cyprinodon_variegatus
ENSACIG00000010653	apex1	93	87.319	ENSDARG00000045843	apex1	89	87.365	Danio_rerio
ENSACIG00000010653	apex1	94	67.384	ENSDNOG00000042234	APEX1	82	67.754	Dasypus_novemcinctus
ENSACIG00000010653	apex1	97	69.444	ENSDORG00000001616	Apex1	87	70.504	Dipodomys_ordii
ENSACIG00000010653	apex1	94	71.326	ENSETEG00000004855	-	87	71.223	Echinops_telfairi
ENSACIG00000010653	apex1	80	60.504	ENSEBUG00000000622	-	92	60.504	Eptatretus_burgeri
ENSACIG00000010653	apex1	97	70.139	ENSEASG00005017489	APEX1	64	71.223	Equus_asinus_asinus
ENSACIG00000010653	apex1	97	70.139	ENSECAG00000022325	APEX1	71	71.223	Equus_caballus
ENSACIG00000010653	apex1	91	71.004	ENSEEUG00000012569	APEX1	93	70.896	Erinaceus_europaeus
ENSACIG00000010653	apex1	94	87.004	ENSELUG00000021706	apex1	89	87.004	Esox_lucius
ENSACIG00000010653	apex1	97	70.242	ENSFCAG00000030869	APEX1	87	71.223	Felis_catus
ENSACIG00000010653	apex1	97	70.934	ENSFDAG00000006120	APEX1	87	71.942	Fukomys_damarensis
ENSACIG00000010653	apex1	95	91.429	ENSFHEG00000009031	apex1	74	91.336	Fundulus_heteroclitus
ENSACIG00000010653	apex1	97	78.397	ENSGMOG00000007943	apex1	89	78.623	Gadus_morhua
ENSACIG00000010653	apex1	95	91.786	ENSGAFG00000005311	apex1	89	91.697	Gambusia_affinis
ENSACIG00000010653	apex1	95	91.429	ENSGACG00000019497	apex1	99	91.729	Gasterosteus_aculeatus
ENSACIG00000010653	apex1	96	74.912	ENSGAGG00000014999	APEX1	87	75.725	Gopherus_agassizii
ENSACIG00000010653	apex1	94	70.968	ENSGGOG00000002128	APEX1	87	70.863	Gorilla_gorilla
ENSACIG00000010653	apex1	93	94.182	ENSHBUG00000005894	apex1	90	94.224	Haplochromis_burtoni
ENSACIG00000010653	apex1	97	70.588	ENSHGLG00000002848	APEX1	87	71.942	Heterocephalus_glaber_female
ENSACIG00000010653	apex1	97	70.588	ENSHGLG00100017878	APEX1	87	71.942	Heterocephalus_glaber_male
ENSACIG00000010653	apex1	97	89.199	ENSHCOG00000009961	apex1	89	89.531	Hippocampus_comes
ENSACIG00000010653	apex1	97	86.760	ENSIPUG00000005799	apex1	89	86.643	Ictalurus_punctatus
ENSACIG00000010653	apex1	94	71.326	ENSSTOG00000010096	APEX1	87	71.223	Ictidomys_tridecemlineatus
ENSACIG00000010653	apex1	98	68.729	ENSJJAG00000012067	-	87	69.784	Jaculus_jaculus
ENSACIG00000010653	apex1	94	62.007	ENSJJAG00000020465	-	89	61.871	Jaculus_jaculus
ENSACIG00000010653	apex1	94	61.290	ENSJJAG00000003660	-	87	61.151	Jaculus_jaculus
ENSACIG00000010653	apex1	95	90.714	ENSKMAG00000021171	apex1	89	90.614	Kryptolebias_marmoratus
ENSACIG00000010653	apex1	95	90.714	ENSLBEG00000010248	apex1	89	90.614	Labrus_bergylta
ENSACIG00000010653	apex1	97	76.207	ENSLACG00000008617	APEX1	87	78.102	Latimeria_chalumnae
ENSACIG00000010653	apex1	97	80.277	ENSLOCG00000015516	apex1	87	80.866	Lepisosteus_oculatus
ENSACIG00000010653	apex1	94	71.685	ENSLAFG00000021872	APEX1	87	71.583	Loxodonta_africana
ENSACIG00000010653	apex1	98	70.000	ENSMFAG00000002565	APEX1	87	70.863	Macaca_fascicularis
ENSACIG00000010653	apex1	98	70.000	ENSMMUG00000048039	APEX1	87	70.863	Macaca_mulatta
ENSACIG00000010653	apex1	98	70.000	ENSMNEG00000036944	APEX1	87	70.863	Macaca_nemestrina
ENSACIG00000010653	apex1	97	69.896	ENSMLEG00000042125	APEX1	87	70.863	Mandrillus_leucophaeus
ENSACIG00000010653	apex1	95	92.143	ENSMAMG00000023526	apex1	89	92.058	Mastacembelus_armatus
ENSACIG00000010653	apex1	93	94.182	ENSMZEG00005014187	apex1	89	94.224	Maylandia_zebra
ENSACIG00000010653	apex1	97	68.512	ENSMAUG00000013994	Apex1	88	69.424	Mesocricetus_auratus
ENSACIG00000010653	apex1	97	69.204	ENSMICG00000043554	APEX1	87	70.144	Microcebus_murinus
ENSACIG00000010653	apex1	97	69.792	ENSMOCG00000013721	Apex1	88	70.863	Microtus_ochrogaster
ENSACIG00000010653	apex1	95	90.391	ENSMMOG00000010031	apex1	87	90.647	Mola_mola
ENSACIG00000010653	apex1	95	69.258	ENSMODG00000007125	APEX1	86	70.545	Monodelphis_domestica
ENSACIG00000010653	apex1	95	85.357	ENSMALG00000011699	apex1	74	85.199	Monopterus_albus
ENSACIG00000010653	apex1	97	70.833	MGP_CAROLIEiJ_G0019209	Apex1	87	71.480	Mus_caroli
ENSACIG00000010653	apex1	97	70.588	ENSMUSG00000035960	Apex1	88	71.223	Mus_musculus
ENSACIG00000010653	apex1	93	71.480	MGP_PahariEiJ_G0030232	Apex1	88	71.223	Mus_pahari
ENSACIG00000010653	apex1	97	70.588	MGP_SPRETEiJ_G0020101	Apex1	88	71.223	Mus_spretus
ENSACIG00000010653	apex1	98	69.072	ENSMLUG00000028957	APEX1	86	70.652	Myotis_lucifugus
ENSACIG00000010653	apex1	97	69.204	ENSNGAG00000002725	-	87	71.014	Nannospalax_galili
ENSACIG00000010653	apex1	96	50.699	ENSNGAG00000021748	-	81	52.632	Nannospalax_galili
ENSACIG00000010653	apex1	93	94.182	ENSNBRG00000005334	apex1	82	94.224	Neolamprologus_brichardi
ENSACIG00000010653	apex1	94	70.968	ENSNLEG00000010839	APEX1	89	70.863	Nomascus_leucogenys
ENSACIG00000010653	apex1	97	68.836	ENSMEUG00000014519	APEX1	87	70.803	Notamacropus_eugenii
ENSACIG00000010653	apex1	97	69.204	ENSOPRG00000014029	APEX1	88	70.144	Ochotona_princeps
ENSACIG00000010653	apex1	94	54.839	ENSODEG00000004777	-	83	58.730	Octodon_degus
ENSACIG00000010653	apex1	97	55.254	ENSODEG00000006583	-	86	55.634	Octodon_degus
ENSACIG00000010653	apex1	97	70.242	ENSODEG00000001703	-	87	71.223	Octodon_degus
ENSACIG00000010653	apex1	94	94.224	ENSONIG00000012089	apex1	89	94.224	Oreochromis_niloticus
ENSACIG00000010653	apex1	96	68.772	ENSOANG00000008836	APEX1	68	70.182	Ornithorhynchus_anatinus
ENSACIG00000010653	apex1	94	71.685	ENSOCUG00000005022	APEX1	87	71.583	Oryctolagus_cuniculus
ENSACIG00000010653	apex1	98	90.722	ENSORLG00000012378	apex1	89	91.697	Oryzias_latipes
ENSACIG00000010653	apex1	98	90.722	ENSORLG00020021371	apex1	89	91.697	Oryzias_latipes_hni
ENSACIG00000010653	apex1	98	90.722	ENSORLG00015020089	apex1	89	91.697	Oryzias_latipes_hsok
ENSACIG00000010653	apex1	95	91.786	ENSOMEG00000018876	apex1	89	91.697	Oryzias_melastigma
ENSACIG00000010653	apex1	94	63.082	ENSOGAG00000029355	-	88	62.950	Otolemur_garnettii
ENSACIG00000010653	apex1	97	70.242	ENSOGAG00000013335	-	87	71.223	Otolemur_garnettii
ENSACIG00000010653	apex1	91	67.286	ENSOARG00000001876	-	86	67.669	Ovis_aries
ENSACIG00000010653	apex1	94	70.251	ENSOARG00000019740	-	87	70.652	Ovis_aries
ENSACIG00000010653	apex1	98	57.432	ENSOARG00000014424	-	88	58.696	Ovis_aries
ENSACIG00000010653	apex1	94	71.326	ENSPPAG00000038760	APEX1	89	71.223	Pan_paniscus
ENSACIG00000010653	apex1	94	71.326	ENSPPRG00000011794	APEX1	87	71.223	Panthera_pardus
ENSACIG00000010653	apex1	97	70.242	ENSPTIG00000014829	APEX1	87	71.223	Panthera_tigris_altaica
ENSACIG00000010653	apex1	94	71.326	ENSPTRG00000006093	APEX1	89	71.223	Pan_troglodytes
ENSACIG00000010653	apex1	97	69.896	ENSPANG00000022757	APEX1	87	70.863	Papio_anubis
ENSACIG00000010653	apex1	93	86.232	ENSPKIG00000003504	apex1	88	86.282	Paramormyrops_kingsleyae
ENSACIG00000010653	apex1	92	76.923	ENSPMGG00000016596	apex1	80	76.923	Periophthalmus_magnuspinnatus
ENSACIG00000010653	apex1	97	69.204	ENSPEMG00000019097	Apex1	88	70.144	Peromyscus_maniculatus_bairdii
ENSACIG00000010653	apex1	97	71.821	ENSPMAG00000007275	-	94	72.924	Petromyzon_marinus
ENSACIG00000010653	apex1	94	69.534	ENSPCIG00000023274	APEX1	86	70.438	Phascolarctos_cinereus
ENSACIG00000010653	apex1	95	91.429	ENSPFOG00000004178	apex1	89	91.336	Poecilia_formosa
ENSACIG00000010653	apex1	95	91.429	ENSPLAG00000012779	apex1	89	91.336	Poecilia_latipinna
ENSACIG00000010653	apex1	95	91.429	ENSPMEG00000019623	apex1	89	91.336	Poecilia_mexicana
ENSACIG00000010653	apex1	95	90.714	ENSPREG00000014298	apex1	89	90.614	Poecilia_reticulata
ENSACIG00000010653	apex1	94	70.968	ENSPPYG00000005565	APEX1	87	70.863	Pongo_abelii
ENSACIG00000010653	apex1	97	68.166	ENSPCAG00000010376	APEX1	87	69.424	Procavia_capensis
ENSACIG00000010653	apex1	97	69.550	ENSPCOG00000021564	APEX1	87	70.504	Propithecus_coquereli
ENSACIG00000010653	apex1	99	68.814	ENSPVAG00000010736	APEX1	87	70.863	Pteropus_vampyrus
ENSACIG00000010653	apex1	93	94.545	ENSPNYG00000023940	apex1	89	94.585	Pundamilia_nyererei
ENSACIG00000010653	apex1	90	89.057	ENSPNAG00000020897	apex1	85	89.328	Pygocentrus_nattereri
ENSACIG00000010653	apex1	97	70.242	ENSRNOG00000009663	Apex1	88	70.863	Rattus_norvegicus
ENSACIG00000010653	apex1	97	70.242	ENSRBIG00000038325	APEX1	86	71.223	Rhinopithecus_bieti
ENSACIG00000010653	apex1	97	61.938	ENSSBOG00000031372	-	90	62.590	Saimiri_boliviensis_boliviensis
ENSACIG00000010653	apex1	94	71.685	ENSSBOG00000018921	-	87	71.583	Saimiri_boliviensis_boliviensis
ENSACIG00000010653	apex1	94	69.149	ENSSHAG00000013524	APEX1	85	70.036	Sarcophilus_harrisii
ENSACIG00000010653	apex1	93	85.870	ENSSFOG00015001948	apex1	89	85.921	Scleropages_formosus
ENSACIG00000010653	apex1	94	90.975	ENSSMAG00000013348	apex1	88	90.975	Scophthalmus_maximus
ENSACIG00000010653	apex1	95	91.429	ENSSDUG00000016377	apex1	89	91.336	Seriola_dumerili
ENSACIG00000010653	apex1	95	90.714	ENSSLDG00000023005	apex1	89	90.614	Seriola_lalandi_dorsalis
ENSACIG00000010653	apex1	95	72.500	ENSSPUG00000000531	APEX1	93	72.826	Sphenodon_punctatus
ENSACIG00000010653	apex1	95	89.286	ENSSPAG00000000458	apex1	91	89.170	Stegastes_partitus
ENSACIG00000010653	apex1	98	41.275	ENSSSCG00000039705	-	89	42.599	Sus_scrofa
ENSACIG00000010653	apex1	96	69.580	ENSSSCG00000040060	-	87	71.377	Sus_scrofa
ENSACIG00000010653	apex1	79	58.298	ENSTGUG00000014378	APEX1	100	58.298	Taeniopygia_guttata
ENSACIG00000010653	apex1	94	89.531	ENSTRUG00000004268	apex1	84	89.531	Takifugu_rubripes
ENSACIG00000010653	apex1	98	88.316	ENSTNIG00000005778	apex1	90	89.170	Tetraodon_nigroviridis
ENSACIG00000010653	apex1	94	68.100	ENSTBEG00000006405	APEX1	87	68.231	Tupaia_belangeri
ENSACIG00000010653	apex1	79	70.638	ENSTTRG00000007860	APEX1	100	70.638	Tursiops_truncatus
ENSACIG00000010653	apex1	98	69.072	ENSUAMG00000010457	APEX1	87	70.504	Ursus_americanus
ENSACIG00000010653	apex1	98	69.072	ENSUMAG00000009178	APEX1	87	70.504	Ursus_maritimus
ENSACIG00000010653	apex1	79	65.957	ENSVPAG00000005083	APEX1	100	65.957	Vicugna_pacos
ENSACIG00000010653	apex1	94	70.968	ENSVVUG00000009010	APEX1	87	70.863	Vulpes_vulpes
ENSACIG00000010653	apex1	95	72.143	ENSXETG00000024773	apex1	87	72.364	Xenopus_tropicalis
ENSACIG00000010653	apex1	95	91.786	ENSXCOG00000015233	apex1	89	91.697	Xiphophorus_couchianus
ENSACIG00000010653	apex1	95	91.786	ENSXMAG00000006195	apex1	89	91.697	Xiphophorus_maculatus