EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000010742 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 14740 bases
Position: chrCCOE01000712.1:1552919-1567658
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000013987	RRM_1	PF00076.22	3.6e-32	1	2
ENSACIP00000013987	RRM_1	PF00076.22	3.6e-32	2	2
ENSACIP00000013976	RRM_1	PF00076.22	5.1e-32	1	2
ENSACIP00000013976	RRM_1	PF00076.22	5.1e-32	2	2
ENSACIP00000013993	RRM_1	PF00076.22	9.6e-18	1	1
ENSACIP00000014001	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000014371	-	480	-	ENSACIP00000013993	159 (aa)	-	-
ENSACIT00000014365	-	795	-	ENSACIP00000013987	264 (aa)	-	-
ENSACIT00000014353	-	885	-	ENSACIP00000013976	294 (aa)	-	-
ENSACIT00000014379	-	519	-	ENSACIP00000014001	172 (aa)	-	-

Gene Model

Click here to download ENSACIG00000010742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000010742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000010742	srsf5b	67	36.364	ENSACIG00000016419	-	56	36.364
ENSACIG00000010742	srsf5b	79	51.145	ENSACIG00000002623	-	84	50.867
ENSACIG00000010742	srsf5b	79	43.511	ENSACIG00000008091	srsf1a	68	43.094
ENSACIG00000010742	srsf5b	81	62.016	ENSACIG00000023658	-	56	65.405
ENSACIG00000010742	srsf5b	98	53.311	ENSACIG00000020091	-	94	62.500
ENSACIG00000010742	srsf5b	94	56.031	ENSACIG00000018649	srsf4	99	51.786
ENSACIG00000010742	srsf5b	82	70.229	ENSACIG00000011892	srsf5a	99	68.613
ENSACIG00000010742	srsf5b	78	35.000	ENSACIG00000015765	srsf9	65	41.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000010742	srsf5b	87	73.188	ENSG00000100650	SRSF5	99	76.154	Homo_sapiens
ENSACIG00000010742	srsf5b	100	96.259	ENSAPOG00000008642	srsf5b	100	96.259	Acanthochromis_polyacanthus
ENSACIG00000010742	srsf5b	81	75.969	ENSAMEG00000014574	SRSF5	92	70.677	Ailuropoda_melanoleuca
ENSACIG00000010742	srsf5b	100	96.259	ENSAOCG00000005719	srsf5b	100	96.259	Amphiprion_ocellaris
ENSACIG00000010742	srsf5b	100	96.259	ENSAPEG00000007830	srsf5b	100	96.259	Amphiprion_percula
ENSACIG00000010742	srsf5b	92	95.926	ENSATEG00000019112	srsf5b	100	95.238	Anabas_testudineus
ENSACIG00000010742	srsf5b	77	75.610	ENSAPLG00000014681	SRSF5	69	78.421	Anas_platyrhynchos
ENSACIG00000010742	srsf5b	81	75.969	ENSACAG00000005143	SRSF5	69	82.105	Anolis_carolinensis
ENSACIG00000010742	srsf5b	82	73.846	ENSANAG00000037529	-	95	73.846	Aotus_nancymaae
ENSACIG00000010742	srsf5b	87	73.188	ENSANAG00000027977	-	76	90.667	Aotus_nancymaae
ENSACIG00000010742	srsf5b	100	99.320	ENSACLG00000026424	srsf5b	100	99.320	Astatotilapia_calliptera
ENSACIG00000010742	srsf5b	100	77.326	ENSAMXG00000011932	srsf5b	96	82.156	Astyanax_mexicanus
ENSACIG00000010742	srsf5b	81	75.969	ENSBTAG00000011596	SRSF5	92	70.677	Bos_taurus
ENSACIG00000010742	srsf5b	87	73.188	ENSCJAG00000014884	SRSF5	76	90.667	Callithrix_jacchus
ENSACIG00000010742	srsf5b	81	75.969	ENSCAFG00000016589	SRSF5	92	70.677	Canis_familiaris
ENSACIG00000010742	srsf5b	81	75.969	ENSCAFG00020005661	SRSF5	92	70.677	Canis_lupus_dingo
ENSACIG00000010742	srsf5b	81	75.969	ENSCHIG00000016794	SRSF5	92	70.677	Capra_hircus
ENSACIG00000010742	srsf5b	87	72.464	ENSTSYG00000007786	SRSF5	98	69.811	Carlito_syrichta
ENSACIG00000010742	srsf5b	81	75.969	ENSCAPG00000008801	SRSF5	92	70.677	Cavia_aperea
ENSACIG00000010742	srsf5b	81	75.969	ENSCPOG00000039926	SRSF5	92	71.053	Cavia_porcellus
ENSACIG00000010742	srsf5b	87	73.188	ENSCCAG00000029002	SRSF5	76	90.667	Cebus_capucinus
ENSACIG00000010742	srsf5b	87	73.188	ENSCATG00000045051	SRSF5	76	90.667	Cercocebus_atys
ENSACIG00000010742	srsf5b	81	75.969	ENSCLAG00000004755	SRSF5	67	81.053	Chinchilla_lanigera
ENSACIG00000010742	srsf5b	81	75.969	ENSCSAG00000013041	SRSF5	93	71.642	Chlorocebus_sabaeus
ENSACIG00000010742	srsf5b	81	75.969	ENSCPBG00000021653	SRSF5	68	81.579	Chrysemys_picta_bellii
ENSACIG00000010742	srsf5b	87	73.188	ENSCANG00000030560	SRSF5	76	90.667	Colobus_angolensis_palliatus
ENSACIG00000010742	srsf5b	81	75.969	ENSCGRG00001015339	Srsf5	93	66.926	Cricetulus_griseus_chok1gshd
ENSACIG00000010742	srsf5b	81	75.969	ENSCGRG00000009833	Srsf5	93	70.301	Cricetulus_griseus_crigri
ENSACIG00000010742	srsf5b	89	90.984	ENSCSEG00000003801	srsf5b	100	91.864	Cynoglossus_semilaevis
ENSACIG00000010742	srsf5b	81	98.450	ENSCVAG00000017240	srsf5b	88	86.458	Cyprinodon_variegatus
ENSACIG00000010742	srsf5b	83	93.182	ENSDARG00000027734	srsf5b	92	93.182	Danio_rerio
ENSACIG00000010742	srsf5b	81	75.969	ENSDNOG00000006160	SRSF5	93	70.677	Dasypus_novemcinctus
ENSACIG00000010742	srsf5b	81	75.969	ENSDORG00000003989	Srsf5	93	63.910	Dipodomys_ordii
ENSACIG00000010742	srsf5b	81	72.093	ENSETEG00000020396	SRSF5	68	78.307	Echinops_telfairi
ENSACIG00000010742	srsf5b	81	57.037	ENSEBUG00000006229	srsf5b	92	46.429	Eptatretus_burgeri
ENSACIG00000010742	srsf5b	81	75.969	ENSEASG00005016615	SRSF5	92	70.677	Equus_asinus_asinus
ENSACIG00000010742	srsf5b	87	72.464	ENSECAG00000026873	SRSF5	93	72.464	Equus_caballus
ENSACIG00000010742	srsf5b	81	94.030	ENSELUG00000019852	srsf5b	100	73.936	Esox_lucius
ENSACIG00000010742	srsf5b	87	72.464	ENSFCAG00000008848	SRSF5	75	90.667	Felis_catus
ENSACIG00000010742	srsf5b	81	75.194	ENSFALG00000004979	SRSF5	87	62.731	Ficedula_albicollis
ENSACIG00000010742	srsf5b	81	75.969	ENSFDAG00000011562	SRSF5	68	81.053	Fukomys_damarensis
ENSACIG00000010742	srsf5b	93	90.146	ENSFHEG00000009476	srsf5b	88	91.912	Fundulus_heteroclitus
ENSACIG00000010742	srsf5b	82	91.241	ENSGMOG00000000595	srsf5b	99	80.531	Gadus_morhua
ENSACIG00000010742	srsf5b	87	71.014	ENSGALG00000009421	SRSF5	93	71.739	Gallus_gallus
ENSACIG00000010742	srsf5b	92	91.111	ENSGAFG00000002865	srsf5b	100	90.099	Gambusia_affinis
ENSACIG00000010742	srsf5b	100	75.978	ENSGACG00000007834	srsf5b	100	77.654	Gasterosteus_aculeatus
ENSACIG00000010742	srsf5b	81	75.969	ENSGAGG00000004447	SRSF5	68	81.579	Gopherus_agassizii
ENSACIG00000010742	srsf5b	87	73.188	ENSGGOG00000016462	SRSF5	76	90.667	Gorilla_gorilla
ENSACIG00000010742	srsf5b	100	98.980	ENSHBUG00000012462	srsf5b	100	98.980	Haplochromis_burtoni
ENSACIG00000010742	srsf5b	81	75.194	ENSHGLG00000010147	SRSF5	93	70.301	Heterocephalus_glaber_female
ENSACIG00000010742	srsf5b	81	75.194	ENSHGLG00100015328	SRSF5	93	70.301	Heterocephalus_glaber_male
ENSACIG00000010742	srsf5b	68	58.889	ENSHGLG00100000095	-	62	58.564	Heterocephalus_glaber_male
ENSACIG00000010742	srsf5b	81	87.879	ENSHCOG00000005592	srsf5b	100	76.744	Hippocampus_comes
ENSACIG00000010742	srsf5b	81	75.969	ENSSTOG00000020672	SRSF5	93	70.677	Ictidomys_tridecemlineatus
ENSACIG00000010742	srsf5b	81	75.969	ENSJJAG00000001688	Srsf5	92	70.677	Jaculus_jaculus
ENSACIG00000010742	srsf5b	92	93.704	ENSKMAG00000020486	srsf5b	100	90.066	Kryptolebias_marmoratus
ENSACIG00000010742	srsf5b	100	94.237	ENSLBEG00000013647	srsf5b	100	94.576	Labrus_bergylta
ENSACIG00000010742	srsf5b	81	79.845	ENSLACG00000005874	SRSF5	68	83.598	Latimeria_chalumnae
ENSACIG00000010742	srsf5b	81	80.597	ENSLOCG00000012438	srsf5b	70	84.021	Lepisosteus_oculatus
ENSACIG00000010742	srsf5b	81	75.194	ENSLAFG00000005260	SRSF5	67	80.526	Loxodonta_africana
ENSACIG00000010742	srsf5b	87	73.188	ENSMFAG00000002393	SRSF5	76	90.667	Macaca_fascicularis
ENSACIG00000010742	srsf5b	87	73.188	ENSMNEG00000030872	SRSF5	76	90.667	Macaca_nemestrina
ENSACIG00000010742	srsf5b	87	73.188	ENSMLEG00000030017	SRSF5	76	90.667	Mandrillus_leucophaeus
ENSACIG00000010742	srsf5b	100	92.517	ENSMAMG00000002673	srsf5b	100	94.218	Mastacembelus_armatus
ENSACIG00000010742	srsf5b	100	99.320	ENSMZEG00005003550	srsf5b	100	99.320	Maylandia_zebra
ENSACIG00000010742	srsf5b	55	76.027	ENSMGAG00000011835	SRSF5	63	75.333	Meleagris_gallopavo
ENSACIG00000010742	srsf5b	81	75.969	ENSMAUG00000009544	Srsf5	93	70.301	Mesocricetus_auratus
ENSACIG00000010742	srsf5b	87	72.464	ENSMICG00000037432	-	76	90.667	Microcebus_murinus
ENSACIG00000010742	srsf5b	81	75.969	ENSMOCG00000013134	Srsf5	93	70.301	Microtus_ochrogaster
ENSACIG00000010742	srsf5b	82	96.923	ENSMMOG00000000137	srsf5b	97	81.618	Mola_mola
ENSACIG00000010742	srsf5b	81	75.969	ENSMODG00000011362	SRSF5	93	72.015	Monodelphis_domestica
ENSACIG00000010742	srsf5b	100	94.595	ENSMALG00000021875	srsf5b	100	94.932	Monopterus_albus
ENSACIG00000010742	srsf5b	81	75.969	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSACIG00000010742	srsf5b	81	75.969	MGP_PahariEiJ_G0029659	Srsf5	93	70.301	Mus_pahari
ENSACIG00000010742	srsf5b	81	75.969	ENSMPUG00000007458	SRSF5	92	70.677	Mustela_putorius_furo
ENSACIG00000010742	srsf5b	81	75.969	ENSMLUG00000011939	SRSF5	91	65.299	Myotis_lucifugus
ENSACIG00000010742	srsf5b	81	75.969	ENSNGAG00000010073	-	93	70.301	Nannospalax_galili
ENSACIG00000010742	srsf5b	100	98.305	ENSNBRG00000001285	srsf5b	100	98.305	Neolamprologus_brichardi
ENSACIG00000010742	srsf5b	87	73.188	ENSNLEG00000001615	SRSF5	76	90.667	Nomascus_leucogenys
ENSACIG00000010742	srsf5b	81	75.969	ENSOPRG00000008286	SRSF5	91	71.747	Ochotona_princeps
ENSACIG00000010742	srsf5b	81	75.969	ENSODEG00000013469	-	93	71.481	Octodon_degus
ENSACIG00000010742	srsf5b	81	73.643	ENSODEG00000000700	-	69	78.947	Octodon_degus
ENSACIG00000010742	srsf5b	100	99.320	ENSONIG00000005759	srsf5b	100	99.320	Oreochromis_niloticus
ENSACIG00000010742	srsf5b	81	69.767	ENSOANG00000013336	SRSF5	94	67.669	Ornithorhynchus_anatinus
ENSACIG00000010742	srsf5b	81	75.969	ENSOCUG00000009274	SRSF5	91	70.677	Oryctolagus_cuniculus
ENSACIG00000010742	srsf5b	100	81.308	ENSORLG00000029854	srsf5b	100	80.062	Oryzias_latipes
ENSACIG00000010742	srsf5b	92	90.406	ENSORLG00015001720	srsf5b	100	90.169	Oryzias_latipes_hsok
ENSACIG00000010742	srsf5b	93	89.781	ENSOMEG00000020690	srsf5b	67	89.668	Oryzias_melastigma
ENSACIG00000010742	srsf5b	81	75.969	ENSOGAG00000015122	SRSF5	93	70.677	Otolemur_garnettii
ENSACIG00000010742	srsf5b	87	73.188	ENSPPAG00000029921	SRSF5	76	90.667	Pan_paniscus
ENSACIG00000010742	srsf5b	87	72.464	ENSPPRG00000012903	SRSF5	75	90.667	Panthera_pardus
ENSACIG00000010742	srsf5b	87	72.464	ENSPTIG00000018589	SRSF5	75	90.667	Panthera_tigris_altaica
ENSACIG00000010742	srsf5b	87	73.188	ENSPTRG00000006488	SRSF5	76	90.667	Pan_troglodytes
ENSACIG00000010742	srsf5b	87	73.188	ENSPANG00000021091	SRSF5	76	90.667	Papio_anubis
ENSACIG00000010742	srsf5b	81	75.969	ENSPSIG00000012522	SRSF5	95	61.409	Pelodiscus_sinensis
ENSACIG00000010742	srsf5b	84	95.522	ENSPMGG00000021646	srsf5b	94	95.522	Periophthalmus_magnuspinnatus
ENSACIG00000010742	srsf5b	81	75.969	ENSPEMG00000020173	Srsf5	93	66.926	Peromyscus_maniculatus_bairdii
ENSACIG00000010742	srsf5b	81	56.204	ENSPMAG00000007790	srsf5b	86	52.830	Petromyzon_marinus
ENSACIG00000010742	srsf5b	81	75.969	ENSPCIG00000011877	SRSF5	93	72.015	Phascolarctos_cinereus
ENSACIG00000010742	srsf5b	92	93.333	ENSPFOG00000017700	srsf5b	100	90.429	Poecilia_formosa
ENSACIG00000010742	srsf5b	92	93.704	ENSPLAG00000006480	srsf5b	100	90.759	Poecilia_latipinna
ENSACIG00000010742	srsf5b	92	93.333	ENSPMEG00000012751	srsf5b	100	90.429	Poecilia_mexicana
ENSACIG00000010742	srsf5b	92	91.111	ENSPREG00000010381	srsf5b	100	90.099	Poecilia_reticulata
ENSACIG00000010742	srsf5b	81	75.969	ENSPPYG00000005945	SRSF5	93	71.642	Pongo_abelii
ENSACIG00000010742	srsf5b	81	75.194	ENSPCAG00000004405	SRSF5	100	79.085	Procavia_capensis
ENSACIG00000010742	srsf5b	87	72.464	ENSPCOG00000014442	SRSF5	93	72.464	Propithecus_coquereli
ENSACIG00000010742	srsf5b	100	96.599	ENSPNYG00000002669	srsf5b	100	96.599	Pundamilia_nyererei
ENSACIG00000010742	srsf5b	100	76.744	ENSPNAG00000011262	srsf5b	84	93.023	Pygocentrus_nattereri
ENSACIG00000010742	srsf5b	81	75.969	ENSRNOG00000005513	Srsf5	93	66.926	Rattus_norvegicus
ENSACIG00000010742	srsf5b	87	73.188	ENSRBIG00000013003	SRSF5	76	90.667	Rhinopithecus_bieti
ENSACIG00000010742	srsf5b	87	73.188	ENSRROG00000043407	SRSF5	76	90.667	Rhinopithecus_roxellana
ENSACIG00000010742	srsf5b	87	73.188	ENSSBOG00000030784	SRSF5	76	90.667	Saimiri_boliviensis_boliviensis
ENSACIG00000010742	srsf5b	81	75.969	ENSSHAG00000002871	SRSF5	93	72.015	Sarcophilus_harrisii
ENSACIG00000010742	srsf5b	93	83.056	ENSSMAG00000019728	srsf5b	91	83.557	Scophthalmus_maximus
ENSACIG00000010742	srsf5b	89	95.802	ENSSDUG00000005766	srsf5b	92	95.802	Seriola_dumerili
ENSACIG00000010742	srsf5b	100	93.537	ENSSLDG00000023255	srsf5b	100	95.238	Seriola_lalandi_dorsalis
ENSACIG00000010742	srsf5b	70	70.270	ENSSARG00000001059	SRSF5	99	60.751	Sorex_araneus
ENSACIG00000010742	srsf5b	87	71.329	ENSSPUG00000002464	SRSF5	94	70.068	Sphenodon_punctatus
ENSACIG00000010742	srsf5b	100	96.599	ENSSPAG00000015325	srsf5b	100	96.599	Stegastes_partitus
ENSACIG00000010742	srsf5b	81	75.969	ENSSSCG00000032583	SRSF5	92	70.301	Sus_scrofa
ENSACIG00000010742	srsf5b	81	75.194	ENSTGUG00000011425	SRSF5	88	62.271	Taeniopygia_guttata
ENSACIG00000010742	srsf5b	81	89.147	ENSTRUG00000017811	srsf5b	100	75.926	Takifugu_rubripes
ENSACIG00000010742	srsf5b	94	80.072	ENSTNIG00000016411	srsf5b	95	83.333	Tetraodon_nigroviridis
ENSACIG00000010742	srsf5b	99	65.605	ENSTBEG00000001972	SRSF5	93	69.776	Tupaia_belangeri
ENSACIG00000010742	srsf5b	81	75.781	ENSTTRG00000003318	SRSF5	92	70.566	Tursiops_truncatus
ENSACIG00000010742	srsf5b	81	75.969	ENSUAMG00000014184	SRSF5	92	70.677	Ursus_americanus
ENSACIG00000010742	srsf5b	81	78.295	ENSUMAG00000009827	SRSF5	92	63.910	Ursus_maritimus
ENSACIG00000010742	srsf5b	81	75.969	ENSVPAG00000006448	SRSF5	93	70.677	Vicugna_pacos
ENSACIG00000010742	srsf5b	81	75.969	ENSVVUG00000003790	SRSF5	92	70.677	Vulpes_vulpes
ENSACIG00000010742	srsf5b	81	79.070	ENSXETG00000002211	srsf5	93	72.491	Xenopus_tropicalis
ENSACIG00000010742	srsf5b	98	85.769	ENSXCOG00000001570	srsf5b	100	88.119	Xiphophorus_couchianus
ENSACIG00000010742	srsf5b	100	86.047	ENSXMAG00000026416	srsf5b	100	90.429	Xiphophorus_maculatus