EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000010771 (Gene tree)
Gene ID: -
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 9542 bases
Position: chrCCOE01000508.1:4148-13689
Accession: ZDB-GENE-040809-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000013886	RRM_1	PF00076.22	4.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000014259	-	1206	-	ENSACIP00000013886	401 (aa)	-	-

Gene Model

Click here to download ENSACIG00000010771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000010771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000010771	rbm42	100	83.498	ENSAPOG00000015109	rbm42	100	83.498	Acanthochromis_polyacanthus
ENSACIG00000010771	rbm42	100	83.990	ENSAOCG00000008873	rbm42	100	83.990	Amphiprion_ocellaris
ENSACIG00000010771	rbm42	100	83.990	ENSAPEG00000012051	rbm42	99	83.990	Amphiprion_percula
ENSACIG00000010771	rbm42	100	81.773	ENSATEG00000000536	rbm42	100	81.773	Anabas_testudineus
ENSACIG00000010771	rbm42	100	87.407	ENSACLG00000004988	rbm42	100	87.407	Astatotilapia_calliptera
ENSACIG00000010771	rbm42	100	70.433	ENSAMXG00000016545	rbm42	100	72.304	Astyanax_mexicanus
ENSACIG00000010771	rbm42	97	76.826	ENSCSEG00000010248	rbm42	100	77.078	Cynoglossus_semilaevis
ENSACIG00000010771	rbm42	100	76.585	ENSCVAG00000015589	rbm42	100	76.341	Cyprinodon_variegatus
ENSACIG00000010771	rbm42	100	66.586	ENSDARG00000039910	rbm42	100	68.204	Danio_rerio
ENSACIG00000010771	rbm42	100	68.171	ENSELUG00000022403	rbm42	100	68.957	Esox_lucius
ENSACIG00000010771	rbm42	66	80.220	ENSFHEG00000006764	rbm42	91	81.319	Fundulus_heteroclitus
ENSACIG00000010771	rbm42	100	68.689	ENSGMOG00000012660	rbm42	100	66.667	Gadus_morhua
ENSACIG00000010771	rbm42	64	81.679	ENSGAFG00000009059	rbm42	98	78.827	Gambusia_affinis
ENSACIG00000010771	rbm42	100	78.660	ENSGACG00000004170	rbm42	100	78.660	Gasterosteus_aculeatus
ENSACIG00000010771	rbm42	100	87.160	ENSHBUG00000011141	rbm42	100	87.160	Haplochromis_burtoni
ENSACIG00000010771	rbm42	100	73.039	ENSHCOG00000021214	rbm42	100	72.794	Hippocampus_comes
ENSACIG00000010771	rbm42	100	66.207	ENSIPUG00000022365	rbm42	99	69.378	Ictalurus_punctatus
ENSACIG00000010771	rbm42	91	75.741	ENSKMAG00000015287	rbm42	99	75.202	Kryptolebias_marmoratus
ENSACIG00000010771	rbm42	84	79.009	ENSLBEG00000004578	-	96	79.009	Labrus_bergylta
ENSACIG00000010771	rbm42	100	79.803	ENSLBEG00000017547	rbm42	100	79.803	Labrus_bergylta
ENSACIG00000010771	rbm42	100	63.830	ENSLOCG00000003368	rbm42	100	65.321	Lepisosteus_oculatus
ENSACIG00000010771	rbm42	100	83.498	ENSMAMG00000006708	rbm42	100	83.498	Mastacembelus_armatus
ENSACIG00000010771	rbm42	100	87.407	ENSMZEG00005025234	rbm42	100	87.407	Maylandia_zebra
ENSACIG00000010771	rbm42	100	77.556	ENSMALG00000015720	rbm42	100	83.740	Monopterus_albus
ENSACIG00000010771	rbm42	100	87.745	ENSONIG00000008029	rbm42	100	87.745	Oreochromis_niloticus
ENSACIG00000010771	rbm42	61	75.410	ENSORLG00020022507	rbm42	56	75.410	Oryzias_latipes_hni
ENSACIG00000010771	rbm42	100	79.259	ENSORLG00015000659	rbm42	100	79.259	Oryzias_latipes_hsok
ENSACIG00000010771	rbm42	60	84.232	ENSOMEG00000014332	rbm42	100	78.947	Oryzias_melastigma
ENSACIG00000010771	rbm42	100	68.900	ENSPKIG00000015165	rbm42	100	70.290	Paramormyrops_kingsleyae
ENSACIG00000010771	rbm42	83	79.104	ENSPMGG00000003569	rbm42	100	98.571	Periophthalmus_magnuspinnatus
ENSACIG00000010771	rbm42	54	58.036	ENSPMAG00000008633	rbm42	97	43.980	Petromyzon_marinus
ENSACIG00000010771	rbm42	100	75.061	ENSPFOG00000007701	rbm42	100	76.773	Poecilia_formosa
ENSACIG00000010771	rbm42	100	75.061	ENSPLAG00000009405	rbm42	100	76.528	Poecilia_latipinna
ENSACIG00000010771	rbm42	100	74.817	ENSPMEG00000010375	rbm42	100	76.528	Poecilia_mexicana
ENSACIG00000010771	rbm42	100	76.238	ENSPREG00000018102	rbm42	100	77.970	Poecilia_reticulata
ENSACIG00000010771	rbm42	100	87.160	ENSPNYG00000014460	rbm42	100	87.160	Pundamilia_nyererei
ENSACIG00000010771	rbm42	100	68.735	ENSPNAG00000009961	rbm42	100	69.212	Pygocentrus_nattereri
ENSACIG00000010771	rbm42	100	66.276	ENSSFOG00015019227	rbm42	100	67.143	Scleropages_formosus
ENSACIG00000010771	rbm42	100	79.361	ENSSMAG00000011935	rbm42	100	78.378	Scophthalmus_maximus
ENSACIG00000010771	rbm42	100	83.990	ENSSDUG00000004033	rbm42	100	83.990	Seriola_dumerili
ENSACIG00000010771	rbm42	100	79.052	ENSSLDG00000009918	rbm42	100	97.183	Seriola_lalandi_dorsalis
ENSACIG00000010771	rbm42	100	83.251	ENSSPAG00000019871	rbm42	100	83.251	Stegastes_partitus
ENSACIG00000010771	rbm42	100	77.805	ENSTRUG00000024586	-	76	77.805	Takifugu_rubripes
ENSACIG00000010771	rbm42	99	65.682	ENSTNIG00000011669	rbm42	100	65.986	Tetraodon_nigroviridis
ENSACIG00000010771	rbm42	100	54.897	ENSXETG00000017599	rbm42	100	56.706	Xenopus_tropicalis
ENSACIG00000010771	rbm42	100	76.543	ENSXMAG00000012827	rbm42	100	78.272	Xiphophorus_maculatus