EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000010787 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 3908 bases
Position: chrCCOE01001794.1:56834-60741
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000013873	RVT_1	PF00078.27	4.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000014246	-	2994	-	ENSACIP00000013873	997 (aa)	-	-

Gene Model

Click here to download ENSACIG00000010787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000010787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000010787	-	96	70.695	ENSACIG00000007038	-	92	70.695
ENSACIG00000010787	-	80	70.193	ENSACIG00000009025	-	99	70.193
ENSACIG00000010787	-	83	83.953	ENSACIG00000013116	-	84	83.953
ENSACIG00000010787	-	96	67.525	ENSACIG00000012161	-	91	67.525

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000010787	-	82	41.423	ENSAMXG00000042811	-	71	41.423	Astyanax_mexicanus
ENSACIG00000010787	-	74	42.029	ENSCPBG00000003842	-	60	42.029	Chrysemys_picta_bellii
ENSACIG00000010787	-	95	34.808	ENSCVAG00000004138	-	98	34.808	Cyprinodon_variegatus
ENSACIG00000010787	-	74	40.524	ENSELUG00000004597	-	85	33.779	Esox_lucius
ENSACIG00000010787	-	94	35.425	ENSFHEG00000002853	-	91	35.425	Fundulus_heteroclitus
ENSACIG00000010787	-	93	30.754	ENSFHEG00000002865	-	88	30.754	Fundulus_heteroclitus
ENSACIG00000010787	-	86	35.430	ENSFHEG00000007211	-	92	35.430	Fundulus_heteroclitus
ENSACIG00000010787	-	95	35.164	ENSFHEG00000022106	-	96	35.260	Fundulus_heteroclitus
ENSACIG00000010787	-	70	30.000	ENSHCOG00000007436	-	66	30.000	Hippocampus_comes
ENSACIG00000010787	-	96	34.266	ENSHCOG00000007389	-	89	34.266	Hippocampus_comes
ENSACIG00000010787	-	86	38.990	ENSHCOG00000000471	-	73	38.990	Hippocampus_comes
ENSACIG00000010787	-	96	31.963	ENSHCOG00000007397	-	94	31.963	Hippocampus_comes
ENSACIG00000010787	-	74	38.868	ENSLBEG00000003745	-	91	38.868	Labrus_bergylta
ENSACIG00000010787	-	78	38.346	ENSLBEG00000006732	-	91	38.346	Labrus_bergylta
ENSACIG00000010787	-	78	38.847	ENSLBEG00000004576	-	91	38.847	Labrus_bergylta
ENSACIG00000010787	-	50	33.272	ENSLACG00000009240	-	95	33.272	Latimeria_chalumnae
ENSACIG00000010787	-	68	31.200	ENSLACG00000006357	-	93	31.200	Latimeria_chalumnae
ENSACIG00000010787	-	94	32.949	ENSLOCG00000011928	-	99	32.949	Lepisosteus_oculatus
ENSACIG00000010787	-	94	30.714	ENSLOCG00000017064	-	99	30.714	Lepisosteus_oculatus
ENSACIG00000010787	-	89	40.229	ENSMAMG00000019985	-	82	40.571	Mastacembelus_armatus
ENSACIG00000010787	-	94	41.771	ENSONIG00000020875	-	89	41.771	Oreochromis_niloticus
ENSACIG00000010787	-	95	34.178	ENSOMEG00000015368	-	99	34.216	Oryzias_melastigma
ENSACIG00000010787	-	87	33.054	ENSPMGG00000017392	-	99	33.054	Periophthalmus_magnuspinnatus
ENSACIG00000010787	-	79	36.589	ENSPMGG00000001593	-	89	36.589	Periophthalmus_magnuspinnatus
ENSACIG00000010787	-	92	41.151	ENSPLAG00000011810	-	87	41.151	Poecilia_latipinna
ENSACIG00000010787	-	93	35.936	ENSPLAG00000011817	-	99	35.936	Poecilia_latipinna
ENSACIG00000010787	-	75	38.943	ENSPLAG00000023379	-	98	38.943	Poecilia_latipinna
ENSACIG00000010787	-	92	41.151	ENSPLAG00000022994	-	88	41.151	Poecilia_latipinna
ENSACIG00000010787	-	92	36.575	ENSPMEG00000008574	-	88	36.575	Poecilia_mexicana
ENSACIG00000010787	-	97	37.198	ENSPMEG00000003431	-	99	37.198	Poecilia_mexicana
ENSACIG00000010787	-	91	39.250	ENSPREG00000005456	-	80	39.250	Poecilia_reticulata
ENSACIG00000010787	-	95	33.366	ENSPREG00000005756	-	93	33.366	Poecilia_reticulata
ENSACIG00000010787	-	92	39.571	ENSPREG00000012484	-	83	39.571	Poecilia_reticulata
ENSACIG00000010787	-	75	35.598	ENSPNAG00000017596	-	78	35.598	Pygocentrus_nattereri
ENSACIG00000010787	-	73	42.159	ENSPNAG00000003539	-	60	42.159	Pygocentrus_nattereri
ENSACIG00000010787	-	80	34.668	ENSPNAG00000021754	-	75	34.668	Pygocentrus_nattereri
ENSACIG00000010787	-	84	42.254	ENSPNAG00000016635	-	71	42.254	Pygocentrus_nattereri
ENSACIG00000010787	-	83	34.951	ENSPNAG00000007038	-	79	34.597	Pygocentrus_nattereri
ENSACIG00000010787	-	94	36.064	ENSXCOG00000013093	-	92	36.064	Xiphophorus_couchianus
ENSACIG00000010787	-	79	37.514	ENSXCOG00000008881	-	97	37.514	Xiphophorus_couchianus
ENSACIG00000010787	-	94	35.000	ENSXMAG00000028672	-	92	35.000	Xiphophorus_maculatus