EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000010867 (Gene tree)
Gene ID: -
Gene Symbol: snrpc
Alias: U1C|chunp6909|zgc:109792
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 3845 bases
Position: chrCCOE01001108.1:1389051-1392895
Accession: ZDB-GENE-020419-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000013964	zf-U1	PF06220.12	8.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000014341	-	420	-	ENSACIP00000013964	139 (aa)	-	-

Gene Model

Click here to download ENSACIG00000010867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000010867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000010867	snrpc	100	64.331	ENSANAG00000021026	-	57	60.784	Aotus_nancymaae
ENSACIG00000010867	snrpc	100	93.197	ENSCSEG00000016845	snrpc	98	93.197	Cynoglossus_semilaevis
ENSACIG00000010867	snrpc	72	98.039	ENSFHEG00000016667	snrpc	91	98.039	Fundulus_heteroclitus
ENSACIG00000010867	snrpc	100	93.103	ENSGMOG00000000090	snrpc	99	93.103	Gadus_morhua
ENSACIG00000010867	snrpc	100	73.288	ENSLBEG00000023881	snrpc	98	93.836	Labrus_bergylta
ENSACIG00000010867	snrpc	100	93.793	ENSMALG00000001197	snrpc	98	93.793	Monopterus_albus
ENSACIG00000010867	snrpc	96	61.594	ENSORLG00000007308	snrpc	95	91.429	Oryzias_latipes
ENSACIG00000010867	snrpc	100	95.775	ENSPMGG00000022162	snrpc	100	95.775	Periophthalmus_magnuspinnatus
ENSACIG00000010867	snrpc	100	84.507	ENSPNYG00000004900	snrpc	100	84.507	Pundamilia_nyererei
ENSACIG00000010867	snrpc	100	97.122	ENSXCOG00000015871	-	100	97.122	Xiphophorus_couchianus