EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000010896 (Gene tree)
Gene ID
-
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Minus strand
Length
6417 bases
Position
chrCCOE01000691.1:3106172-3112588
Accession
ZDB-GENE-031118-30
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000014308MMR_HSR1PF01926.230.0001211
ENSACIP00000014328MMR_HSR1PF01926.230.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000014692-651-ENSACIP00000014308216 (aa)--
ENSACIT00000014712-663-ENSACIP00000014328220 (aa)--
Gene Model
Click here to download ENSACIG00000010896's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000010896's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000010896rab5c7343.038ENSACIG00000014094rab6bb7743.038
ENSACIG00000010896rab5c9032.836ENSACIG00000006558-9731.841
ENSACIG00000010896rab5c7437.736ENSACIG00000009306RAB157537.736
ENSACIG00000010896rab5c9148.980ENSACIG00000014012rab22a8453.374
ENSACIG00000010896rab5c7739.181ENSACIG00000021459zgc:1015597539.181
ENSACIG00000010896rab5c8142.529ENSACIG00000010914RAB418242.529
ENSACIG00000010896rab5c5531.148ENSACIG00000000868arl8a6631.061
ENSACIG00000010896rab5c7536.585ENSACIG00000023837-7736.585
ENSACIG00000010896rab5c7348.408ENSACIG00000017403rab11al7348.408
ENSACIG00000010896rab5c7534.161ENSACIG00000000670rabl27134.161
ENSACIG00000010896rab5c7940.936ENSACIG00000003157-8042.763
ENSACIG00000010896rab5c9883.333ENSACIG00000019251rab5aa9982.870
ENSACIG00000010896rab5c7943.182ENSACIG00000013630RAB7A8642.697
ENSACIG00000010896rab5c7943.182ENSACIG00000022381-8543.182
ENSACIG00000010896rab5c7532.515ENSACIG00000000100kras5332.515
ENSACIG00000010896rab5c7535.976ENSACIG00000003102rab42a7535.976
ENSACIG00000010896rab5c7537.952ENSACIG00000022520rab33a7437.952
ENSACIG00000010896rab5c6248.872ENSACIG00000019631rab11bb7048.872
ENSACIG00000010896rab5c8143.182ENSACIG00000009006zgc:1719277644.785
ENSACIG00000010896rab5c7550.920ENSACIG00000006949RAB177150.920
ENSACIG00000010896rab5c9044.388ENSACIG00000019049rab1ab8846.923
ENSACIG00000010896rab5c7637.349ENSACIG00000000154RAB39B7737.805
ENSACIG00000010896rab5c8942.347ENSACIG00000014625-8046.012
ENSACIG00000010896rab5c7349.045ENSACIG00000024374rab11ba6549.045
ENSACIG00000010896rab5c7547.826ENSACIG00000024376-7447.826
ENSACIG00000010896rab5c8435.829ENSACIG00000020616rab127736.170
ENSACIG00000010896rab5c7642.771ENSACIG00000023222-8140.541
ENSACIG00000010896rab5c9042.500ENSACIG00000017414rab25b7946.626
ENSACIG00000010896rab5c6535.714ENSACIG00000020496rab237436.842
ENSACIG00000010896rab5c7333.125ENSACIG00000000642rab366133.125
ENSACIG00000010896rab5c8330.270ENSACIG00000017824rras8130.625
ENSACIG00000010896rab5c7638.788ENSACIG00000009617rab18a7838.788
ENSACIG00000010896rab5c7530.286ENSACIG00000013119-7534.437
ENSACIG00000010896rab5c7547.826ENSACIG00000003092rab11a7647.239
ENSACIG00000010896rab5c9243.564ENSACIG00000019803rab25a9443.564
ENSACIG00000010896rab5c7734.302ENSACIG00000018043rab9a8534.302
ENSACIG00000010896rab5c9132.710ENSACIG00000016958si:dkey-34d22.57535.542
ENSACIG00000010896rab5c7539.130ENSACIG00000010619rab157639.130
ENSACIG00000010896rab5c7544.172ENSACIG00000014605rab6a7844.172
ENSACIG00000010896rab5c7740.719ENSACIG00000008584rab138040.719
ENSACIG00000010896rab5c7436.585ENSACIG00000011024si:dkey-13a21.48036.585
ENSACIG00000010896rab5c6033.077ENSACIG00000008620rab34a5733.077
ENSACIG00000010896rab5c7646.061ENSACIG00000008102rab18b9542.000
ENSACIG00000010896rab5c5932.576ENSACIG00000009595arl8bb6632.576
ENSACIG00000010896rab5c5631.452ENSACIG00000008614arl8ba6331.452
ENSACIG00000010896rab5c8537.019ENSACIG00000021855rab33ba8537.019
ENSACIG00000010896rab5c8339.896ENSACIG00000022208-8541.477
ENSACIG00000010896rab5c9040.102ENSACIG00000007154rab6ba8242.857
ENSACIG00000010896rab5c8034.831ENSACIG00000007739rab9b8734.831
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000010896rab5c9890.278ENSG00000108774RAB5C10095.161Homo_sapiens
ENSACIG00000010896rab5c10095.909ENSAPOG00000016864rab5c10095.909Acanthochromis_polyacanthus
ENSACIG00000010896rab5c9890.278ENSAMEG00000006003RAB5C9988.889Ailuropoda_melanoleuca
ENSACIG00000010896rab5c10095.909ENSAOCG00000016614rab5c10095.909Amphiprion_ocellaris
ENSACIG00000010896rab5c9995.305ENSAPEG00000017868-9995.814Amphiprion_percula
ENSACIG00000010896rab5c9997.696ENSATEG00000001937rab5c9997.696Anabas_testudineus
ENSACIG00000010896rab5c9392.195ENSANAG00000025390RAB5C10090.244Aotus_nancymaae
ENSACIG00000010896rab5c9888.732ENSACLG00000008615-10087.838Astatotilapia_calliptera
ENSACIG00000010896rab5c10098.182ENSACLG00000002706rab5c10098.182Astatotilapia_calliptera
ENSACIG00000010896rab5c9691.827ENSAMXG00000037267-9991.827Astyanax_mexicanus
ENSACIG00000010896rab5c10097.285ENSAMXG00000043717rab5c10097.285Astyanax_mexicanus
ENSACIG00000010896rab5c9890.278ENSBTAG00000006982RAB5C9988.426Bos_taurus
ENSACIG00000010896rab5c9874.194WBGene00004268rab-59974.528Caenorhabditis_elegans
ENSACIG00000010896rab5c9890.278ENSCAFG00000015629RAB5C9988.889Canis_familiaris
ENSACIG00000010896rab5c9890.278ENSCAFG00020013537RAB5C9988.889Canis_lupus_dingo
ENSACIG00000010896rab5c9890.278ENSCHIG00000012960RAB5C9988.426Capra_hircus
ENSACIG00000010896rab5c9890.741ENSTSYG00000030531RAB5C9988.889Carlito_syrichta
ENSACIG00000010896rab5c9890.278ENSCCAG00000025940RAB5C9988.426Cebus_capucinus
ENSACIG00000010896rab5c9890.278ENSCATG00000040873RAB5C9988.889Cercocebus_atys
ENSACIG00000010896rab5c9890.278ENSCLAG00000016650RAB5C9988.426Chinchilla_lanigera
ENSACIG00000010896rab5c8194.382ENSCHOG00000009886RAB5C10094.382Choloepus_hoffmanni
ENSACIG00000010896rab5c10075.000ENSCING00000003340-10074.545Ciona_intestinalis
ENSACIG00000010896rab5c9975.664ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSACIG00000010896rab5c9890.278ENSCGRG00001014226Rab5c9988.426Cricetulus_griseus_chok1gshd
ENSACIG00000010896rab5c9890.278ENSCGRG00000007534Rab5c9988.426Cricetulus_griseus_crigri
ENSACIG00000010896rab5c10094.545ENSCSEG00000017024rab5c10094.545Cynoglossus_semilaevis
ENSACIG00000010896rab5c10095.455ENSCVAG00000009550rab5c10095.455Cyprinodon_variegatus
ENSACIG00000010896rab5c9890.278ENSDNOG00000038853RAB5C9987.963Dasypus_novemcinctus
ENSACIG00000010896rab5c9891.204ENSDORG00000006819Rab5c9989.352Dipodomys_ordii
ENSACIG00000010896rab5c9076.263FBgn0014010Rab58480.000Drosophila_melanogaster
ENSACIG00000010896rab5c8586.559ENSEBUG00000014794rab5c8886.559Eptatretus_burgeri
ENSACIG00000010896rab5c9890.278ENSEASG00005009281RAB5C9988.889Equus_asinus_asinus
ENSACIG00000010896rab5c9890.741ENSECAG00000025054RAB5C9988.889Equus_caballus
ENSACIG00000010896rab5c9890.278ENSEEUG00000002790RAB5C9988.426Erinaceus_europaeus
ENSACIG00000010896rab5c9894.907ENSELUG00000018516rab5c9994.907Esox_lucius
ENSACIG00000010896rab5c10091.818ENSELUG00000010439-10091.818Esox_lucius
ENSACIG00000010896rab5c9890.278ENSFCAG00000002148RAB5C9988.426Felis_catus
ENSACIG00000010896rab5c9889.815ENSFDAG00000021541RAB5C9987.963Fukomys_damarensis
ENSACIG00000010896rab5c9990.411ENSFHEG00000015268-9990.411Fundulus_heteroclitus
ENSACIG00000010896rab5c10096.818ENSFHEG00000012117rab5c10096.818Fundulus_heteroclitus
ENSACIG00000010896rab5c10095.000ENSGMOG00000015096rab5c10095.000Gadus_morhua
ENSACIG00000010896rab5c7887.500ENSGMOG00000001876-9787.500Gadus_morhua
ENSACIG00000010896rab5c9590.909ENSGAFG00000003642-9988.739Gambusia_affinis
ENSACIG00000010896rab5c10096.818ENSGAFG00000000884rab5c10096.818Gambusia_affinis
ENSACIG00000010896rab5c10092.273ENSGACG00000008659rab5c10092.273Gasterosteus_aculeatus
ENSACIG00000010896rab5c9890.278ENSGGOG00000005472RAB5C9988.889Gorilla_gorilla
ENSACIG00000010896rab5c9888.732ENSHBUG00000006823-10087.838Haplochromis_burtoni
ENSACIG00000010896rab5c10098.182ENSHBUG00000002014rab5c10098.182Haplochromis_burtoni
ENSACIG00000010896rab5c9889.815ENSHGLG00000012067RAB5C9987.500Heterocephalus_glaber_female
ENSACIG00000010896rab5c9781.905ENSHCOG00000020238-9979.909Hippocampus_comes
ENSACIG00000010896rab5c10096.833ENSHCOG00000004662rab5c9996.833Hippocampus_comes
ENSACIG00000010896rab5c9794.737ENSIPUG00000020082rab5c10094.144Ictalurus_punctatus
ENSACIG00000010896rab5c9889.815ENSSTOG00000006620RAB5C9988.426Ictidomys_tridecemlineatus
ENSACIG00000010896rab5c9890.741ENSJJAG00000021181Rab5c9988.426Jaculus_jaculus
ENSACIG00000010896rab5c9990.411ENSKMAG00000017417-9990.411Kryptolebias_marmoratus
ENSACIG00000010896rab5c10096.818ENSKMAG00000020038rab5c10096.818Kryptolebias_marmoratus
ENSACIG00000010896rab5c10090.045ENSLBEG00000010408-10090.045Labrus_bergylta
ENSACIG00000010896rab5c10097.273ENSLBEG00000004128rab5c10097.273Labrus_bergylta
ENSACIG00000010896rab5c9892.593ENSLOCG00000012566rab5c10091.204Lepisosteus_oculatus
ENSACIG00000010896rab5c9890.278ENSMFAG00000039627RAB5C9988.889Macaca_fascicularis
ENSACIG00000010896rab5c9890.278ENSMNEG00000000355RAB5C9988.889Macaca_nemestrina
ENSACIG00000010896rab5c9990.909ENSMAMG00000016207-10090.909Mastacembelus_armatus
ENSACIG00000010896rab5c10096.818ENSMAMG00000022322rab5c10096.818Mastacembelus_armatus
ENSACIG00000010896rab5c9888.732ENSMZEG00005021090-10087.838Maylandia_zebra
ENSACIG00000010896rab5c10098.182ENSMZEG00005022735rab5c10098.182Maylandia_zebra
ENSACIG00000010896rab5c9890.741ENSMAUG00000015005Rab5c9988.889Mesocricetus_auratus
ENSACIG00000010896rab5c9890.741ENSMICG00000041608RAB5C9988.889Microcebus_murinus
ENSACIG00000010896rab5c9890.741ENSMOCG00000018531-9988.426Microtus_ochrogaster
ENSACIG00000010896rab5c10096.818ENSMMOG00000020621rab5c10096.818Mola_mola
ENSACIG00000010896rab5c9988.182ENSMALG00000022348-10088.182Monopterus_albus
ENSACIG00000010896rab5c9989.671ENSMALG00000006052rab5c9789.954Monopterus_albus
ENSACIG00000010896rab5c9890.741MGP_CAROLIEiJ_G0017184Rab5c9988.889Mus_caroli
ENSACIG00000010896rab5c9890.741ENSMUSG00000019173Rab5c9988.889Mus_musculus
ENSACIG00000010896rab5c9890.741MGP_PahariEiJ_G0018314Rab5c9988.889Mus_pahari
ENSACIG00000010896rab5c9890.741MGP_SPRETEiJ_G0018027Rab5c9988.889Mus_spretus
ENSACIG00000010896rab5c9890.278ENSMPUG00000010554RAB5C9988.889Mustela_putorius_furo
ENSACIG00000010896rab5c9890.278ENSNGAG00000010286Rab5c9988.426Nannospalax_galili
ENSACIG00000010896rab5c9888.732ENSNBRG00000016922-10087.838Neolamprologus_brichardi
ENSACIG00000010896rab5c10099.091ENSNBRG00000018165rab5c10099.091Neolamprologus_brichardi
ENSACIG00000010896rab5c8187.640ENSOPRG00000008255RAB5C10087.640Ochotona_princeps
ENSACIG00000010896rab5c9889.815ENSODEG00000017920RAB5C9987.963Octodon_degus
ENSACIG00000010896rab5c10098.182ENSONIG00000001113rab5c10098.182Oreochromis_niloticus
ENSACIG00000010896rab5c9996.313ENSORLG00000003882rab5c9996.313Oryzias_latipes
ENSACIG00000010896rab5c9996.313ENSORLG00020008388rab5c9996.313Oryzias_latipes_hni
ENSACIG00000010896rab5c9996.313ENSORLG00015021900rab5c9996.313Oryzias_latipes_hsok
ENSACIG00000010896rab5c9996.313ENSOMEG00000023078rab5c9996.313Oryzias_melastigma
ENSACIG00000010896rab5c9890.741ENSOGAG00000009456RAB5C9988.889Otolemur_garnettii
ENSACIG00000010896rab5c9890.278ENSOARG00000018768RAB5C9988.426Ovis_aries
ENSACIG00000010896rab5c9890.278ENSPPAG00000037206RAB5C9988.889Pan_paniscus
ENSACIG00000010896rab5c9890.278ENSPPRG00000005745RAB5C9988.426Panthera_pardus
ENSACIG00000010896rab5c9890.278ENSPTIG00000008177RAB5C9988.426Panthera_tigris_altaica
ENSACIG00000010896rab5c9890.278ENSPTRG00000009194RAB5C9988.889Pan_troglodytes
ENSACIG00000010896rab5c9888.426ENSPKIG00000020112-9988.426Paramormyrops_kingsleyae
ENSACIG00000010896rab5c9888.426ENSPKIG00000001237-9986.574Paramormyrops_kingsleyae
ENSACIG00000010896rab5c9993.897ENSPMGG00000010792rab5c9993.953Periophthalmus_magnuspinnatus
ENSACIG00000010896rab5c9890.741ENSPEMG00000017971Rab5c9988.426Peromyscus_maniculatus_bairdii
ENSACIG00000010896rab5c9975.115ENSPMAG00000001399rab5c9976.389Petromyzon_marinus
ENSACIG00000010896rab5c9878.733ENSPMAG00000000008rab5c8886.458Petromyzon_marinus
ENSACIG00000010896rab5c8781.818ENSPMAG00000007867rab5c8982.447Petromyzon_marinus
ENSACIG00000010896rab5c9890.278ENSPCIG00000020225-9988.889Phascolarctos_cinereus
ENSACIG00000010896rab5c10096.818ENSPLAG00000004790rab5c10096.818Poecilia_latipinna
ENSACIG00000010896rab5c9989.954ENSPLAG00000016333-10089.954Poecilia_latipinna
ENSACIG00000010896rab5c9691.080ENSPMEG00000012614-10089.238Poecilia_mexicana
ENSACIG00000010896rab5c10096.818ENSPMEG00000011336rab5c10096.818Poecilia_mexicana
ENSACIG00000010896rab5c8591.005ENSPREG00000022167-8992.350Poecilia_reticulata
ENSACIG00000010896rab5c10096.818ENSPREG00000010146rab5c10096.818Poecilia_reticulata
ENSACIG00000010896rab5c9890.278ENSPPYG00000008398RAB5C9988.889Pongo_abelii
ENSACIG00000010896rab5c9889.352ENSPCAG00000016412RAB5C9987.500Procavia_capensis
ENSACIG00000010896rab5c9890.278ENSPCOG00000026327RAB5C9988.426Propithecus_coquereli
ENSACIG00000010896rab5c9890.741ENSPVAG00000003867RAB5C9988.889Pteropus_vampyrus
ENSACIG00000010896rab5c9888.732ENSPNYG00000015851-10087.838Pundamilia_nyererei
ENSACIG00000010896rab5c10098.182ENSPNYG00000010615rab5c10098.182Pundamilia_nyererei
ENSACIG00000010896rab5c10096.380ENSPNAG00000028138rab5c10096.380Pygocentrus_nattereri
ENSACIG00000010896rab5c9789.474ENSPNAG00000002218-9989.048Pygocentrus_nattereri
ENSACIG00000010896rab5c9890.741ENSRNOG00000018568Rab5c9988.889Rattus_norvegicus
ENSACIG00000010896rab5c9890.278ENSRBIG00000031376RAB5C9988.889Rhinopithecus_bieti
ENSACIG00000010896rab5c9890.278ENSRROG00000032895RAB5C9988.889Rhinopithecus_roxellana
ENSACIG00000010896rab5c9890.278ENSSBOG00000032552-9988.426Saimiri_boliviensis_boliviensis
ENSACIG00000010896rab5c9890.741ENSSHAG00000005267-9989.352Sarcophilus_harrisii
ENSACIG00000010896rab5c10086.818ENSSFOG00015009988-10086.818Scleropages_formosus
ENSACIG00000010896rab5c9597.129ENSSMAG00000007323rab5c10095.909Scophthalmus_maximus
ENSACIG00000010896rab5c10096.818ENSSDUG00000023008rab5c10096.818Seriola_dumerili
ENSACIG00000010896rab5c10095.909ENSSLDG00000017771rab5c10095.909Seriola_lalandi_dorsalis
ENSACIG00000010896rab5c9890.741ENSSPUG00000012950-9988.889Sphenodon_punctatus
ENSACIG00000010896rab5c10097.727ENSSPAG00000006436rab5c10097.727Stegastes_partitus
ENSACIG00000010896rab5c9890.278ENSSSCG00000032467RAB5C9988.426Sus_scrofa
ENSACIG00000010896rab5c10095.000ENSTRUG00000015590rab5c10095.000Takifugu_rubripes
ENSACIG00000010896rab5c9896.682ENSTNIG00000011711rab5c9597.156Tetraodon_nigroviridis
ENSACIG00000010896rab5c9890.278ENSTBEG00000007092RAB5C9988.889Tupaia_belangeri
ENSACIG00000010896rab5c9889.815ENSTTRG00000006673RAB5C9987.963Tursiops_truncatus
ENSACIG00000010896rab5c9890.278ENSUAMG00000024343RAB5C9988.889Ursus_americanus
ENSACIG00000010896rab5c9890.278ENSUMAG00000023270RAB5C9988.889Ursus_maritimus
ENSACIG00000010896rab5c10096.818ENSXCOG00000016788rab5c10096.818Xiphophorus_couchianus
ENSACIG00000010896rab5c9591.388ENSXCOG00000006300-9989.189Xiphophorus_couchianus
ENSACIG00000010896rab5c9989.498ENSXMAG00000022179-10089.498Xiphophorus_maculatus
ENSACIG00000010896rab5c10096.818ENSXMAG00000003266rab5c10096.818Xiphophorus_maculatus

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