EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000010933 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 14110 bases
Position: chrCCOE01001252.1:535200-549309
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000014536	KH_1	PF00013.29	1.8e-48	1	3
ENSACIP00000014536	KH_1	PF00013.29	1.8e-48	2	3
ENSACIP00000014536	KH_1	PF00013.29	1.8e-48	3	3
ENSACIP00000014488	KH_1	PF00013.29	2.6e-48	1	3
ENSACIP00000014488	KH_1	PF00013.29	2.6e-48	2	3
ENSACIP00000014488	KH_1	PF00013.29	2.6e-48	3	3
ENSACIP00000014452	KH_1	PF00013.29	2.7e-48	1	3
ENSACIP00000014452	KH_1	PF00013.29	2.7e-48	2	3
ENSACIP00000014452	KH_1	PF00013.29	2.7e-48	3	3
ENSACIP00000014553	KH_1	PF00013.29	1.7e-46	1	3
ENSACIP00000014553	KH_1	PF00013.29	1.7e-46	2	3
ENSACIP00000014553	KH_1	PF00013.29	1.7e-46	3	3
ENSACIP00000014562	KH_1	PF00013.29	1.9e-46	1	3
ENSACIP00000014562	KH_1	PF00013.29	1.9e-46	2	3
ENSACIP00000014562	KH_1	PF00013.29	1.9e-46	3	3
ENSACIP00000014372	KH_1	PF00013.29	1.3e-29	1	2
ENSACIP00000014372	KH_1	PF00013.29	1.3e-29	2	2
ENSACIP00000014536	KH_2	PF07650.17	9.3e-11	1	1
ENSACIP00000014553	KH_2	PF07650.17	4.3e-10	1	1
ENSACIP00000014488	KH_2	PF07650.17	5.6e-10	1	1
ENSACIP00000014452	KH_2	PF07650.17	5.8e-10	1	1
ENSACIP00000014562	KH_2	PF07650.17	2.3e-09	1	1
ENSACIP00000014372	KH_2	PF07650.17	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000014925	-	942	-	ENSACIP00000014536	313 (aa)	-	-
ENSACIT00000014836	-	1035	-	ENSACIP00000014452	344 (aa)	-	-
ENSACIT00000014951	-	897	-	ENSACIP00000014562	298 (aa)	-	-
ENSACIT00000014874	-	1026	-	ENSACIP00000014488	341 (aa)	-	-
ENSACIT00000014942	-	906	-	ENSACIP00000014553	301 (aa)	-	-
ENSACIT00000014756	-	726	-	ENSACIP00000014372	241 (aa)	-	-

Gene Model

Click here to download ENSACIG00000010933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000010933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000010933	pcbp3	94	34.127	ENSACIG00000001392	igf2bp3	61	34.127
ENSACIG00000010933	pcbp3	98	88.529	ENSACIG00000002739	-	99	88.529
ENSACIG00000010933	pcbp3	96	71.192	ENSACIG00000000035	pcbp2	94	71.192
ENSACIG00000010933	pcbp3	77	52.632	ENSACIG00000005320	hnrnpk	53	53.030
ENSACIG00000010933	pcbp3	87	38.356	ENSACIG00000005212	-	60	38.356
ENSACIG00000010933	pcbp3	90	40.000	ENSACIG00000007544	-	82	31.613
ENSACIG00000010933	pcbp3	88	30.952	ENSACIG00000013204	igf2bp1	55	30.137
ENSACIG00000010933	pcbp3	87	63.072	ENSACIG00000020434	-	72	63.072
ENSACIG00000010933	pcbp3	89	44.643	ENSACIG00000009298	khsrp	55	44.643
ENSACIG00000010933	pcbp3	95	80.925	ENSACIG00000002577	zgc:110045	95	69.820
ENSACIG00000010933	pcbp3	87	34.483	ENSACIG00000001308	igf2bp2b	50	34.483
ENSACIG00000010933	pcbp3	72	38.596	ENSACIG00000017818	nova1	68	38.596
ENSACIG00000010933	pcbp3	96	69.205	ENSACIG00000016893	PCBP2	97	66.462
ENSACIG00000010933	pcbp3	72	54.545	ENSACIG00000014814	hnrpkl	57	54.545
ENSACIG00000010933	pcbp3	84	63.051	ENSACIG00000015264	pcbp4	62	63.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000010933	pcbp3	95	92.049	ENSAPOG00000020003	pcbp3	86	92.049	Acanthochromis_polyacanthus
ENSACIG00000010933	pcbp3	100	88.571	ENSAPOG00000016582	-	100	88.571	Acanthochromis_polyacanthus
ENSACIG00000010933	pcbp3	93	84.320	ENSAMEG00000001697	-	96	84.320	Ailuropoda_melanoleuca
ENSACIG00000010933	pcbp3	88	84.127	ENSAOCG00000007806	-	99	84.127	Amphiprion_ocellaris
ENSACIG00000010933	pcbp3	97	88.824	ENSAOCG00000008592	-	100	88.824	Amphiprion_ocellaris
ENSACIG00000010933	pcbp3	100	96.591	ENSAPEG00000008011	pcbp3	100	96.591	Amphiprion_percula
ENSACIG00000010933	pcbp3	98	87.097	ENSAPEG00000005209	-	99	87.097	Amphiprion_percula
ENSACIG00000010933	pcbp3	98	88.166	ENSATEG00000009833	-	99	88.166	Anabas_testudineus
ENSACIG00000010933	pcbp3	95	99.083	ENSATEG00000015787	-	100	99.083	Anabas_testudineus
ENSACIG00000010933	pcbp3	97	80.818	ENSAPLG00000002975	-	95	82.991	Anas_platyrhynchos
ENSACIG00000010933	pcbp3	98	75.749	ENSAPLG00000008951	-	82	75.749	Anas_platyrhynchos
ENSACIG00000010933	pcbp3	93	84.098	ENSACAG00000009819	-	95	84.098	Anolis_carolinensis
ENSACIG00000010933	pcbp3	93	88.184	ENSACAG00000004607	-	96	88.184	Anolis_carolinensis
ENSACIG00000010933	pcbp3	73	87.085	ENSANAG00000030702	-	91	94.318	Aotus_nancymaae
ENSACIG00000010933	pcbp3	100	88.000	ENSACLG00000003801	-	100	88.000	Astatotilapia_calliptera
ENSACIG00000010933	pcbp3	100	96.875	ENSACLG00000011835	pcbp3	100	96.875	Astatotilapia_calliptera
ENSACIG00000010933	pcbp3	94	67.568	ENSAMXG00000001760	zgc:110045	73	66.667	Astyanax_mexicanus
ENSACIG00000010933	pcbp3	99	83.871	ENSAMXG00000013588	-	100	87.156	Astyanax_mexicanus
ENSACIG00000010933	pcbp3	100	94.571	ENSAMXG00000003440	pcbp3	100	94.571	Astyanax_mexicanus
ENSACIG00000010933	pcbp3	93	92.670	ENSCAFG00020019472	-	84	85.232	Canis_lupus_dingo
ENSACIG00000010933	pcbp3	96	85.119	ENSCSAG00000007440	-	89	85.119	Chlorocebus_sabaeus
ENSACIG00000010933	pcbp3	98	82.938	ENSCPBG00000000733	-	76	80.347	Chrysemys_picta_bellii
ENSACIG00000010933	pcbp3	98	83.673	ENSCPBG00000012151	-	95	83.673	Chrysemys_picta_bellii
ENSACIG00000010933	pcbp3	95	90.214	ENSCSEG00000000822	pcbp3	99	90.214	Cynoglossus_semilaevis
ENSACIG00000010933	pcbp3	96	90.722	ENSCSEG00000016984	-	97	75.758	Cynoglossus_semilaevis
ENSACIG00000010933	pcbp3	100	88.000	ENSCVAG00000005262	-	100	88.000	Cyprinodon_variegatus
ENSACIG00000010933	pcbp3	100	96.307	ENSCVAG00000014482	pcbp3	100	96.307	Cyprinodon_variegatus
ENSACIG00000010933	pcbp3	100	94.857	ENSDARG00000054378	pcbp3	100	94.857	Danio_rerio
ENSACIG00000010933	pcbp3	93	75.535	ENSETEG00000015988	-	95	75.535	Echinops_telfairi
ENSACIG00000010933	pcbp3	94	62.719	ENSEBUG00000005495	pcbp3	68	63.855	Eptatretus_burgeri
ENSACIG00000010933	pcbp3	87	67.110	ENSEBUG00000016192	pcbp3	99	68.729	Eptatretus_burgeri
ENSACIG00000010933	pcbp3	93	80.105	ENSEBUG00000007485	-	92	70.248	Eptatretus_burgeri
ENSACIG00000010933	pcbp3	100	88.286	ENSELUG00000001560	-	96	86.842	Esox_lucius
ENSACIG00000010933	pcbp3	100	95.184	ENSELUG00000003521	pcbp3	100	95.184	Esox_lucius
ENSACIG00000010933	pcbp3	93	86.239	ENSFALG00000003949	-	95	86.239	Ficedula_albicollis
ENSACIG00000010933	pcbp3	98	76.022	ENSFALG00000004411	-	77	76.022	Ficedula_albicollis
ENSACIG00000010933	pcbp3	98	87.097	ENSFHEG00000006539	-	99	87.097	Fundulus_heteroclitus
ENSACIG00000010933	pcbp3	98	89.583	ENSFHEG00000016615	pcbp3	98	89.583	Fundulus_heteroclitus
ENSACIG00000010933	pcbp3	94	66.856	ENSGMOG00000008611	-	100	66.856	Gadus_morhua
ENSACIG00000010933	pcbp3	99	75.556	ENSGMOG00000011992	pcbp3	96	75.235	Gadus_morhua
ENSACIG00000010933	pcbp3	93	85.358	ENSGALG00000013155	-	98	85.358	Gallus_gallus
ENSACIG00000010933	pcbp3	93	88.406	ENSGALG00000004394	-	96	88.406	Gallus_gallus
ENSACIG00000010933	pcbp3	100	88.000	ENSGAFG00000010274	-	100	88.000	Gambusia_affinis
ENSACIG00000010933	pcbp3	95	96.061	ENSGAFG00000011430	pcbp3	96	96.061	Gambusia_affinis
ENSACIG00000010933	pcbp3	95	81.586	ENSGACG00000014955	-	97	81.586	Gasterosteus_aculeatus
ENSACIG00000010933	pcbp3	98	80.495	ENSGACG00000002266	-	99	80.495	Gasterosteus_aculeatus
ENSACIG00000010933	pcbp3	84	81.034	ENSGAGG00000000271	-	100	81.034	Gopherus_agassizii
ENSACIG00000010933	pcbp3	86	90.909	ENSGAGG00000006956	-	87	90.909	Gopherus_agassizii
ENSACIG00000010933	pcbp3	100	88.000	ENSHBUG00000021782	-	100	88.000	Haplochromis_burtoni
ENSACIG00000010933	pcbp3	100	96.875	ENSHBUG00000010697	pcbp3	100	96.875	Haplochromis_burtoni
ENSACIG00000010933	pcbp3	99	82.911	ENSHCOG00000006067	-	99	82.941	Hippocampus_comes
ENSACIG00000010933	pcbp3	100	96.581	ENSHCOG00000017868	pcbp3	100	96.581	Hippocampus_comes
ENSACIG00000010933	pcbp3	98	92.128	ENSIPUG00000006238	pcbp3	99	92.128	Ictalurus_punctatus
ENSACIG00000010933	pcbp3	100	87.143	ENSKMAG00000018530	-	100	87.143	Kryptolebias_marmoratus
ENSACIG00000010933	pcbp3	100	96.307	ENSKMAG00000003046	pcbp3	100	96.307	Kryptolebias_marmoratus
ENSACIG00000010933	pcbp3	96	90.634	ENSLBEG00000006201	pcbp3	96	90.634	Labrus_bergylta
ENSACIG00000010933	pcbp3	100	80.523	ENSLBEG00000006542	-	100	80.814	Labrus_bergylta
ENSACIG00000010933	pcbp3	97	83.747	ENSLACG00000010386	pcbp3	77	83.747	Latimeria_chalumnae
ENSACIG00000010933	pcbp3	98	75.824	ENSLACG00000010804	zgc:110045	77	75.824	Latimeria_chalumnae
ENSACIG00000010933	pcbp3	93	83.486	ENSLOCG00000005058	zgc:110045	80	83.486	Lepisosteus_oculatus
ENSACIG00000010933	pcbp3	96	91.964	ENSLOCG00000009369	pcbp3	98	91.964	Lepisosteus_oculatus
ENSACIG00000010933	pcbp3	95	91.743	ENSMAMG00000022336	pcbp3	93	91.743	Mastacembelus_armatus
ENSACIG00000010933	pcbp3	98	86.982	ENSMAMG00000011620	-	99	86.982	Mastacembelus_armatus
ENSACIG00000010933	pcbp3	100	98.000	ENSMZEG00005008993	pcbp3	100	98.000	Maylandia_zebra
ENSACIG00000010933	pcbp3	100	90.029	ENSMZEG00005014882	-	100	90.029	Maylandia_zebra
ENSACIG00000010933	pcbp3	97	84.699	ENSMGAG00000001883	-	96	77.586	Meleagris_gallopavo
ENSACIG00000010933	pcbp3	98	76.022	ENSMGAG00000006794	-	77	76.022	Meleagris_gallopavo
ENSACIG00000010933	pcbp3	98	87.537	ENSMMOG00000005216	-	99	87.537	Mola_mola
ENSACIG00000010933	pcbp3	95	88.060	ENSMMOG00000000730	pcbp3	88	88.060	Mola_mola
ENSACIG00000010933	pcbp3	73	85.981	ENSMODG00000027884	-	93	85.981	Monodelphis_domestica
ENSACIG00000010933	pcbp3	100	98.261	ENSMALG00000000691	pcbp3	100	98.261	Monopterus_albus
ENSACIG00000010933	pcbp3	97	78.233	ENSMPUG00000001779	-	88	79.240	Mustela_putorius_furo
ENSACIG00000010933	pcbp3	96	95.238	ENSNBRG00000016714	-	100	90.857	Neolamprologus_brichardi
ENSACIG00000010933	pcbp3	100	99.128	ENSNBRG00000016409	-	100	99.128	Neolamprologus_brichardi
ENSACIG00000010933	pcbp3	93	88.529	ENSOPRG00000003431	-	99	88.529	Ochotona_princeps
ENSACIG00000010933	pcbp3	95	91.785	ENSONIG00000012122	-	98	91.785	Oreochromis_niloticus
ENSACIG00000010933	pcbp3	98	86.006	ENSONIG00000004611	-	99	86.006	Oreochromis_niloticus
ENSACIG00000010933	pcbp3	93	85.933	ENSOCUG00000002696	-	87	85.933	Oryctolagus_cuniculus
ENSACIG00000010933	pcbp3	95	90.390	ENSORLG00000000059	pcbp3	100	90.390	Oryzias_latipes
ENSACIG00000010933	pcbp3	99	87.966	ENSORLG00000022739	-	99	87.966	Oryzias_latipes
ENSACIG00000010933	pcbp3	95	90.390	ENSORLG00020012671	pcbp3	97	90.390	Oryzias_latipes_hni
ENSACIG00000010933	pcbp3	99	87.679	ENSORLG00020006124	-	99	87.679	Oryzias_latipes_hni
ENSACIG00000010933	pcbp3	99	87.966	ENSORLG00015008051	-	99	87.966	Oryzias_latipes_hsok
ENSACIG00000010933	pcbp3	95	90.390	ENSORLG00015000429	pcbp3	97	90.390	Oryzias_latipes_hsok
ENSACIG00000010933	pcbp3	99	84.839	ENSOMEG00000020162	-	97	88.720	Oryzias_melastigma
ENSACIG00000010933	pcbp3	88	92.027	ENSOMEG00000020811	pcbp3	96	92.027	Oryzias_melastigma
ENSACIG00000010933	pcbp3	93	79.944	ENSOGAG00000008044	-	96	79.944	Otolemur_garnettii
ENSACIG00000010933	pcbp3	100	87.429	ENSPKIG00000019329	pcbp3	100	87.429	Paramormyrops_kingsleyae
ENSACIG00000010933	pcbp3	93	86.885	ENSPKIG00000020913	-	92	81.643	Paramormyrops_kingsleyae
ENSACIG00000010933	pcbp3	93	74.128	ENSPSIG00000014970	-	95	74.709	Pelodiscus_sinensis
ENSACIG00000010933	pcbp3	76	81.226	ENSPSIG00000008350	-	72	81.226	Pelodiscus_sinensis
ENSACIG00000010933	pcbp3	100	96.286	ENSPMGG00000022383	pcbp3	100	96.286	Periophthalmus_magnuspinnatus
ENSACIG00000010933	pcbp3	97	64.263	ENSPMAG00000004551	pcbp3	90	66.172	Petromyzon_marinus
ENSACIG00000010933	pcbp3	93	84.574	ENSPMAG00000004637	-	97	84.574	Petromyzon_marinus
ENSACIG00000010933	pcbp3	93	93.272	ENSPCIG00000028092	-	96	93.272	Phascolarctos_cinereus
ENSACIG00000010933	pcbp3	100	84.694	ENSPLAG00000011449	pcbp3	100	84.694	Poecilia_latipinna
ENSACIG00000010933	pcbp3	98	82.748	ENSPLAG00000004074	-	89	85.757	Poecilia_latipinna
ENSACIG00000010933	pcbp3	100	96.045	ENSPMEG00000021239	pcbp3	100	96.045	Poecilia_mexicana
ENSACIG00000010933	pcbp3	100	90.323	ENSPMEG00000006653	-	100	90.029	Poecilia_mexicana
ENSACIG00000010933	pcbp3	95	89.908	ENSPREG00000015736	pcbp3	99	89.908	Poecilia_reticulata
ENSACIG00000010933	pcbp3	99	85.161	ENSPREG00000020585	-	97	89.024	Poecilia_reticulata
ENSACIG00000010933	pcbp3	98	87.537	ENSPNYG00000013205	-	99	87.537	Pundamilia_nyererei
ENSACIG00000010933	pcbp3	95	91.291	ENSPNYG00000012326	pcbp3	95	91.291	Pundamilia_nyererei
ENSACIG00000010933	pcbp3	100	92.308	ENSPNAG00000008541	-	100	92.308	Pygocentrus_nattereri
ENSACIG00000010933	pcbp3	98	86.589	ENSPNAG00000015104	pcbp3	99	86.589	Pygocentrus_nattereri
ENSACIG00000010933	pcbp3	93	86.544	ENSRNOG00000001245	Pcbp3	95	86.544	Rattus_norvegicus
ENSACIG00000010933	pcbp3	96	77.989	ENSRBIG00000028177	-	98	77.989	Rhinopithecus_bieti
ENSACIG00000010933	pcbp3	97	92.021	ENSSHAG00000007890	-	96	81.268	Sarcophilus_harrisii
ENSACIG00000010933	pcbp3	100	92.857	ENSSFOG00015014706	pcbp3	100	92.857	Scleropages_formosus
ENSACIG00000010933	pcbp3	95	94.595	ENSSFOG00015010205	pcbp3	100	94.595	Scleropages_formosus
ENSACIG00000010933	pcbp3	97	77.273	ENSSFOG00015007118	-	93	78.704	Scleropages_formosus
ENSACIG00000010933	pcbp3	100	87.714	ENSSMAG00000003135	-	100	87.714	Scophthalmus_maximus
ENSACIG00000010933	pcbp3	95	92.049	ENSSMAG00000011929	pcbp3	97	92.049	Scophthalmus_maximus
ENSACIG00000010933	pcbp3	100	90.988	ENSSDUG00000008502	-	100	90.988	Seriola_dumerili
ENSACIG00000010933	pcbp3	95	98.176	ENSSDUG00000011608	pcbp3	99	98.176	Seriola_dumerili
ENSACIG00000010933	pcbp3	95	98.176	ENSSLDG00000008518	pcbp3	99	98.176	Seriola_lalandi_dorsalis
ENSACIG00000010933	pcbp3	100	88.571	ENSSLDG00000020161	-	100	88.571	Seriola_lalandi_dorsalis
ENSACIG00000010933	pcbp3	93	89.011	ENSSPUG00000013214	-	93	81.639	Sphenodon_punctatus
ENSACIG00000010933	pcbp3	88	84.127	ENSSPAG00000004190	-	99	84.127	Stegastes_partitus
ENSACIG00000010933	pcbp3	100	87.320	ENSSPAG00000023341	-	100	87.320	Stegastes_partitus
ENSACIG00000010933	pcbp3	97	77.346	ENSTGUG00000008158	-	96	80.428	Taeniopygia_guttata
ENSACIG00000010933	pcbp3	97	77.160	ENSTGUG00000003316	-	96	79.310	Taeniopygia_guttata
ENSACIG00000010933	pcbp3	97	82.883	ENSTRUG00000006280	-	99	82.883	Takifugu_rubripes
ENSACIG00000010933	pcbp3	100	93.410	ENSTRUG00000013604	pcbp3	100	93.410	Takifugu_rubripes
ENSACIG00000010933	pcbp3	93	85.879	ENSTTRG00000015075	-	96	85.879	Tursiops_truncatus
ENSACIG00000010933	pcbp3	97	77.134	ENSXETG00000011483	pcbp1	96	80.692	Xenopus_tropicalis
ENSACIG00000010933	pcbp3	94	74.504	ENSXETG00000010491	pcbp2	77	74.504	Xenopus_tropicalis
ENSACIG00000010933	pcbp3	100	96.045	ENSXCOG00000020481	pcbp3	100	96.045	Xiphophorus_couchianus
ENSACIG00000010933	pcbp3	100	88.286	ENSXMAG00000028711	-	100	88.286	Xiphophorus_maculatus
ENSACIG00000010933	pcbp3	100	96.591	ENSXMAG00000008175	pcbp3	100	96.591	Xiphophorus_maculatus