EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000010985 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 13203 bases
Position: chrCCOE01000173.1:368527-381729
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000014157	UPF1_Zn_bind	PF09416.10	8.1e-75	1	1
ENSACIP00000014157	ResIII	PF04851.15	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000014538	-	3075	-	ENSACIP00000014157	1024 (aa)	-	-

Gene Model

Click here to download ENSACIG00000010985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000010985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000010985	-	100	93.268	ENSACIG00000019949	upf1	93	93.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000010985	-	100	95.122	ENSG00000005007	UPF1	92	95.024	Homo_sapiens
ENSACIG00000010985	-	100	93.003	ENSAPOG00000023773	upf1	94	92.507	Acanthochromis_polyacanthus
ENSACIG00000010985	-	100	98.539	ENSAPOG00000010916	-	93	98.539	Acanthochromis_polyacanthus
ENSACIG00000010985	-	100	94.112	ENSAMEG00000011474	UPF1	92	94.015	Ailuropoda_melanoleuca
ENSACIG00000010985	-	100	92.480	ENSAOCG00000018519	upf1	94	92.891	Amphiprion_ocellaris
ENSACIG00000010985	-	100	98.442	ENSAOCG00000006352	-	100	94.839	Amphiprion_ocellaris
ENSACIG00000010985	-	100	92.480	ENSAPEG00000016344	upf1	94	92.891	Amphiprion_percula
ENSACIG00000010985	-	100	98.345	ENSAPEG00000006292	-	100	94.742	Amphiprion_percula
ENSACIG00000010985	-	100	91.309	ENSATEG00000017867	upf1	94	92.234	Anabas_testudineus
ENSACIG00000010985	-	100	98.345	ENSATEG00000016606	-	93	98.345	Anabas_testudineus
ENSACIG00000010985	-	100	94.112	ENSAPLG00000009175	UPF1	98	94.015	Anas_platyrhynchos
ENSACIG00000010985	-	100	92.761	ENSANAG00000024107	UPF1	94	92.664	Aotus_nancymaae
ENSACIG00000010985	-	100	98.247	ENSACLG00000022630	-	93	98.247	Astatotilapia_calliptera
ENSACIG00000010985	-	100	93.073	ENSACLG00000007181	upf1	93	92.976	Astatotilapia_calliptera
ENSACIG00000010985	-	100	94.358	ENSAMXG00000042187	upf1	93	94.547	Astyanax_mexicanus
ENSACIG00000010985	-	100	94.112	ENSBTAG00000020922	UPF1	92	94.015	Bos_taurus
ENSACIG00000010985	-	97	51.275	WBGene00004880	smg-2	94	51.275	Caenorhabditis_elegans
ENSACIG00000010985	-	100	94.112	ENSCJAG00000019627	UPF1	92	94.015	Callithrix_jacchus
ENSACIG00000010985	-	100	94.112	ENSCAFG00000014578	UPF1	92	94.015	Canis_familiaris
ENSACIG00000010985	-	100	95.122	ENSCAFG00020012347	UPF1	92	95.024	Canis_lupus_dingo
ENSACIG00000010985	-	100	95.122	ENSCHIG00000011018	UPF1	92	95.024	Capra_hircus
ENSACIG00000010985	-	100	93.726	ENSTSYG00000008877	UPF1	96	93.629	Carlito_syrichta
ENSACIG00000010985	-	100	93.822	ENSCAPG00000005758	UPF1	94	93.726	Cavia_aperea
ENSACIG00000010985	-	100	93.822	ENSCPOG00000025463	UPF1	93	93.726	Cavia_porcellus
ENSACIG00000010985	-	100	95.122	ENSCCAG00000032175	UPF1	92	95.024	Cebus_capucinus
ENSACIG00000010985	-	100	94.112	ENSCATG00000040306	UPF1	97	94.015	Cercocebus_atys
ENSACIG00000010985	-	100	93.919	ENSCLAG00000004037	UPF1	98	93.822	Chinchilla_lanigera
ENSACIG00000010985	-	100	95.122	ENSCSAG00000005276	UPF1	92	95.024	Chlorocebus_sabaeus
ENSACIG00000010985	-	100	94.553	ENSCPBG00000012513	UPF1	92	94.455	Chrysemys_picta_bellii
ENSACIG00000010985	-	75	82.768	ENSCING00000021399	-	91	82.768	Ciona_intestinalis
ENSACIG00000010985	-	99	74.516	ENSCSAVG00000006533	-	93	74.419	Ciona_savignyi
ENSACIG00000010985	-	100	94.112	ENSCANG00000029819	UPF1	96	94.015	Colobus_angolensis_palliatus
ENSACIG00000010985	-	100	94.439	ENSCGRG00001021067	Upf1	92	94.341	Cricetulus_griseus_chok1gshd
ENSACIG00000010985	-	100	93.436	ENSCGRG00000013480	Upf1	97	93.340	Cricetulus_griseus_crigri
ENSACIG00000010985	-	99	87.805	ENSCSEG00000017239	upf1	93	87.209	Cynoglossus_semilaevis
ENSACIG00000010985	-	100	98.146	ENSCSEG00000016159	-	93	98.146	Cynoglossus_semilaevis
ENSACIG00000010985	-	100	97.760	ENSCVAG00000010561	upf1	93	97.760	Cyprinodon_variegatus
ENSACIG00000010985	-	100	93.677	ENSDARG00000016302	upf1	93	93.872	Danio_rerio
ENSACIG00000010985	-	100	91.418	ENSDORG00000009984	Upf1	94	91.321	Dipodomys_ordii
ENSACIG00000010985	-	84	74.971	FBgn0030354	Upf1	75	73.678	Drosophila_melanogaster
ENSACIG00000010985	-	51	91.031	ENSEBUG00000010069	upf1	87	91.031	Eptatretus_burgeri
ENSACIG00000010985	-	100	95.024	ENSEASG00005006549	UPF1	92	94.927	Equus_asinus_asinus
ENSACIG00000010985	-	100	95.024	ENSECAG00000010639	UPF1	92	94.927	Equus_caballus
ENSACIG00000010985	-	100	92.546	ENSELUG00000020917	upf1	93	92.539	Esox_lucius
ENSACIG00000010985	-	100	93.907	ENSELUG00000012916	-	93	93.907	Esox_lucius
ENSACIG00000010985	-	100	94.112	ENSFCAG00000009757	UPF1	92	94.015	Felis_catus
ENSACIG00000010985	-	100	94.752	ENSFALG00000009312	UPF1	95	94.655	Ficedula_albicollis
ENSACIG00000010985	-	100	93.822	ENSFDAG00000014816	UPF1	98	93.726	Fukomys_damarensis
ENSACIG00000010985	-	100	89.961	ENSFHEG00000006428	upf1	93	89.565	Fundulus_heteroclitus
ENSACIG00000010985	-	91	97.650	ENSFHEG00000016276	-	94	97.650	Fundulus_heteroclitus
ENSACIG00000010985	-	100	94.986	ENSGMOG00000007541	upf1	93	94.986	Gadus_morhua
ENSACIG00000010985	-	100	95.122	ENSGALG00000003220	UPF1	92	95.024	Gallus_gallus
ENSACIG00000010985	-	67	95.301	ENSGAFG00000015443	-	84	95.301	Gambusia_affinis
ENSACIG00000010985	-	100	97.756	ENSGAFG00000004831	upf1	93	97.756	Gambusia_affinis
ENSACIG00000010985	-	100	94.927	ENSGAGG00000022217	UPF1	93	94.829	Gopherus_agassizii
ENSACIG00000010985	-	100	95.122	ENSGGOG00000002608	UPF1	97	95.024	Gorilla_gorilla
ENSACIG00000010985	-	86	100.000	ENSHBUG00000008939	upf1	88	100.000	Haplochromis_burtoni
ENSACIG00000010985	-	87	85.057	ENSHBUG00000014694	upf1	90	85.057	Haplochromis_burtoni
ENSACIG00000010985	-	100	93.629	ENSHGLG00000010900	UPF1	92	93.533	Heterocephalus_glaber_female
ENSACIG00000010985	-	100	92.085	ENSHGLG00100005904	UPF1	95	91.988	Heterocephalus_glaber_male
ENSACIG00000010985	-	100	97.661	ENSHCOG00000008918	upf1	99	96.705	Hippocampus_comes
ENSACIG00000010985	-	100	94.358	ENSIPUG00000005108	UPF1	93	94.455	Ictalurus_punctatus
ENSACIG00000010985	-	100	94.927	ENSSTOG00000009196	UPF1	92	94.829	Ictidomys_tridecemlineatus
ENSACIG00000010985	-	100	93.050	ENSJJAG00000023151	Upf1	92	93.043	Jaculus_jaculus
ENSACIG00000010985	-	100	98.053	ENSKMAG00000004962	upf1	93	98.053	Kryptolebias_marmoratus
ENSACIG00000010985	-	100	98.152	ENSLBEG00000027848	-	93	98.152	Labrus_bergylta
ENSACIG00000010985	-	99	91.346	ENSLBEG00000014862	upf1	93	92.308	Labrus_bergylta
ENSACIG00000010985	-	68	93.831	ENSLACG00000008482	UPF1	100	93.257	Latimeria_chalumnae
ENSACIG00000010985	-	100	95.127	ENSLOCG00000002072	upf1	93	95.029	Lepisosteus_oculatus
ENSACIG00000010985	-	100	93.629	ENSLAFG00000014963	UPF1	92	93.533	Loxodonta_africana
ENSACIG00000010985	-	100	94.112	ENSMFAG00000037748	UPF1	92	94.015	Macaca_fascicularis
ENSACIG00000010985	-	100	94.112	ENSMMUG00000023286	UPF1	92	94.015	Macaca_mulatta
ENSACIG00000010985	-	100	94.112	ENSMNEG00000000046	UPF1	92	94.015	Macaca_nemestrina
ENSACIG00000010985	-	100	94.112	ENSMLEG00000028404	UPF1	98	94.015	Mandrillus_leucophaeus
ENSACIG00000010985	-	100	91.563	ENSMAMG00000006229	upf1	93	92.706	Mastacembelus_armatus
ENSACIG00000010985	-	100	97.860	ENSMAMG00000006231	-	93	97.860	Mastacembelus_armatus
ENSACIG00000010985	-	100	98.247	ENSMZEG00005016386	-	93	98.247	Maylandia_zebra
ENSACIG00000010985	-	100	91.563	ENSMZEG00005003489	upf1	94	92.293	Maylandia_zebra
ENSACIG00000010985	-	100	93.635	ENSMGAG00000004745	UPF1	99	93.539	Meleagris_gallopavo
ENSACIG00000010985	-	100	93.436	ENSMAUG00000011398	Upf1	94	93.340	Mesocricetus_auratus
ENSACIG00000010985	-	100	94.829	ENSMICG00000001659	UPF1	92	94.732	Microcebus_murinus
ENSACIG00000010985	-	100	93.436	ENSMOCG00000005699	Upf1	92	93.340	Microtus_ochrogaster
ENSACIG00000010985	-	100	96.008	ENSMMOG00000007537	-	98	96.008	Mola_mola
ENSACIG00000010985	-	100	92.676	ENSMMOG00000007881	upf1	93	93.268	Mola_mola
ENSACIG00000010985	-	100	94.927	ENSMODG00000003689	UPF1	93	94.829	Monodelphis_domestica
ENSACIG00000010985	-	100	96.896	ENSMALG00000018100	-	93	96.896	Monopterus_albus
ENSACIG00000010985	-	100	92.285	ENSMALG00000000144	upf1	93	92.210	Monopterus_albus
ENSACIG00000010985	-	100	94.341	MGP_CAROLIEiJ_G0031142	Upf1	92	94.244	Mus_caroli
ENSACIG00000010985	-	100	94.341	ENSMUSG00000058301	Upf1	92	94.244	Mus_musculus
ENSACIG00000010985	-	100	94.341	MGP_PahariEiJ_G0021607	Upf1	92	94.244	Mus_pahari
ENSACIG00000010985	-	100	94.341	MGP_SPRETEiJ_G0032260	Upf1	92	94.244	Mus_spretus
ENSACIG00000010985	-	100	95.122	ENSMPUG00000015516	UPF1	92	95.024	Mustela_putorius_furo
ENSACIG00000010985	-	100	94.927	ENSMLUG00000012122	UPF1	92	94.829	Myotis_lucifugus
ENSACIG00000010985	-	100	93.147	ENSNGAG00000024107	Upf1	92	93.050	Nannospalax_galili
ENSACIG00000010985	-	100	97.179	ENSNBRG00000022069	-	99	97.179	Neolamprologus_brichardi
ENSACIG00000010985	-	100	91.228	ENSNBRG00000000670	upf1	93	91.131	Neolamprologus_brichardi
ENSACIG00000010985	-	100	88.224	ENSNLEG00000006062	UPF1	98	88.127	Nomascus_leucogenys
ENSACIG00000010985	-	82	88.039	ENSMEUG00000014146	-	75	87.843	Notamacropus_eugenii
ENSACIG00000010985	-	100	87.805	ENSOPRG00000014018	UPF1	98	87.707	Ochotona_princeps
ENSACIG00000010985	-	100	93.822	ENSODEG00000012426	UPF1	93	93.726	Octodon_degus
ENSACIG00000010985	-	100	91.755	ENSONIG00000010452	upf1	94	92.486	Oreochromis_niloticus
ENSACIG00000010985	-	100	98.442	ENSONIG00000012729	-	93	98.442	Oreochromis_niloticus
ENSACIG00000010985	-	100	93.250	ENSOANG00000004568	UPF1	92	93.250	Ornithorhynchus_anatinus
ENSACIG00000010985	-	100	97.176	ENSORLG00000008453	upf1	93	97.176	Oryzias_latipes
ENSACIG00000010985	-	100	97.176	ENSORLG00020014758	upf1	93	97.176	Oryzias_latipes_hni
ENSACIG00000010985	-	100	97.176	ENSORLG00015010165	upf1	100	92.795	Oryzias_latipes_hsok
ENSACIG00000010985	-	100	97.371	ENSOMEG00000003665	upf1	93	97.371	Oryzias_melastigma
ENSACIG00000010985	-	100	95.024	ENSOGAG00000012866	UPF1	92	94.927	Otolemur_garnettii
ENSACIG00000010985	-	96	93.594	ENSOARG00000010739	UPF1	92	93.493	Ovis_aries
ENSACIG00000010985	-	100	94.112	ENSPPAG00000043884	UPF1	95	94.015	Pan_paniscus
ENSACIG00000010985	-	100	94.112	ENSPPRG00000023470	UPF1	92	94.015	Panthera_pardus
ENSACIG00000010985	-	100	93.171	ENSPTIG00000010159	UPF1	98	93.073	Panthera_tigris_altaica
ENSACIG00000010985	-	100	94.112	ENSPTRG00000010721	UPF1	92	94.015	Pan_troglodytes
ENSACIG00000010985	-	100	94.112	ENSPANG00000008847	UPF1	92	94.015	Papio_anubis
ENSACIG00000010985	-	91	94.268	ENSPKIG00000006069	upf1	88	95.969	Paramormyrops_kingsleyae
ENSACIG00000010985	-	75	92.941	ENSPSIG00000009491	UPF1	100	92.810	Pelodiscus_sinensis
ENSACIG00000010985	-	99	91.545	ENSPMGG00000017327	upf1	93	91.642	Periophthalmus_magnuspinnatus
ENSACIG00000010985	-	100	93.436	ENSPEMG00000001085	Upf1	92	93.340	Peromyscus_maniculatus_bairdii
ENSACIG00000010985	-	100	89.632	ENSPMAG00000001206	upf1	93	89.632	Petromyzon_marinus
ENSACIG00000010985	-	100	94.927	ENSPCIG00000006156	UPF1	92	94.829	Phascolarctos_cinereus
ENSACIG00000010985	-	100	97.854	ENSPLAG00000016232	-	93	97.854	Poecilia_latipinna
ENSACIG00000010985	-	100	91.216	ENSPLAG00000018155	-	93	90.664	Poecilia_latipinna
ENSACIG00000010985	-	100	91.829	ENSPMEG00000011443	-	93	91.334	Poecilia_mexicana
ENSACIG00000010985	-	100	97.758	ENSPMEG00000016319	-	93	97.758	Poecilia_mexicana
ENSACIG00000010985	-	100	97.659	ENSPREG00000011247	-	93	97.659	Poecilia_reticulata
ENSACIG00000010985	-	100	91.988	ENSPREG00000009940	upf1	93	91.338	Poecilia_reticulata
ENSACIG00000010985	-	100	88.696	ENSPPYG00000009752	UPF1	91	88.696	Pongo_abelii
ENSACIG00000010985	-	71	98.851	ENSPCAG00000012962	UPF1	65	98.851	Procavia_capensis
ENSACIG00000010985	-	100	94.015	ENSPCOG00000023813	UPF1	92	93.919	Propithecus_coquereli
ENSACIG00000010985	-	66	100.000	ENSPVAG00000003183	UPF1	60	100.000	Pteropus_vampyrus
ENSACIG00000010985	-	100	91.563	ENSPNYG00000003694	upf1	94	92.293	Pundamilia_nyererei
ENSACIG00000010985	-	100	98.150	ENSPNYG00000016731	-	93	98.150	Pundamilia_nyererei
ENSACIG00000010985	-	100	93.969	ENSPNAG00000025614	upf1	93	94.158	Pygocentrus_nattereri
ENSACIG00000010985	-	100	94.341	ENSRNOG00000020134	Upf1	92	94.244	Rattus_norvegicus
ENSACIG00000010985	-	100	91.699	ENSRBIG00000013894	UPF1	98	94.414	Rhinopithecus_bieti
ENSACIG00000010985	-	100	94.112	ENSRROG00000040935	UPF1	98	94.414	Rhinopithecus_roxellana
ENSACIG00000010985	-	79	57.160	YMR080C	NAM7	84	57.160	Saccharomyces_cerevisiae
ENSACIG00000010985	-	100	94.112	ENSSBOG00000023632	UPF1	95	94.015	Saimiri_boliviensis_boliviensis
ENSACIG00000010985	-	100	93.738	ENSSHAG00000010499	UPF1	99	93.642	Sarcophilus_harrisii
ENSACIG00000010985	-	100	94.834	ENSSFOG00015021095	upf1	98	94.932	Scleropages_formosus
ENSACIG00000010985	-	100	90.700	ENSSMAG00000005055	upf1	93	91.635	Scophthalmus_maximus
ENSACIG00000010985	-	100	98.152	ENSSMAG00000021018	-	93	98.152	Scophthalmus_maximus
ENSACIG00000010985	-	100	98.444	ENSSDUG00000009629	-	93	98.444	Seriola_dumerili
ENSACIG00000010985	-	100	91.275	ENSSDUG00000013320	upf1	93	92.514	Seriola_dumerili
ENSACIG00000010985	-	100	98.444	ENSSLDG00000006878	-	93	98.444	Seriola_lalandi_dorsalis
ENSACIG00000010985	-	100	92.159	ENSSLDG00000020868	upf1	93	92.740	Seriola_lalandi_dorsalis
ENSACIG00000010985	-	100	94.927	ENSSPUG00000010538	UPF1	92	94.829	Sphenodon_punctatus
ENSACIG00000010985	-	100	90.573	ENSSPAG00000000003	upf1	93	90.625	Stegastes_partitus
ENSACIG00000010985	-	100	98.538	ENSSPAG00000011521	-	93	98.538	Stegastes_partitus
ENSACIG00000010985	-	100	95.024	ENSSSCG00000039301	UPF1	98	94.927	Sus_scrofa
ENSACIG00000010985	-	81	89.387	ENSTGUG00000001057	UPF1	86	95.719	Taeniopygia_guttata
ENSACIG00000010985	-	100	93.073	ENSTRUG00000000150	upf1	94	92.976	Takifugu_rubripes
ENSACIG00000010985	-	100	97.171	ENSTRUG00000005131	-	93	97.171	Takifugu_rubripes
ENSACIG00000010985	-	100	90.927	ENSTTRG00000011544	UPF1	92	90.829	Tursiops_truncatus
ENSACIG00000010985	-	100	95.122	ENSUAMG00000007093	UPF1	92	95.024	Ursus_americanus
ENSACIG00000010985	-	100	95.122	ENSUMAG00000006652	UPF1	99	94.813	Ursus_maritimus
ENSACIG00000010985	-	100	95.122	ENSVVUG00000007797	UPF1	92	95.024	Vulpes_vulpes
ENSACIG00000010985	-	100	80.481	ENSXETG00000013602	upf1	91	80.192	Xenopus_tropicalis
ENSACIG00000010985	-	100	97.659	ENSXCOG00000005764	-	99	97.659	Xiphophorus_couchianus
ENSACIG00000010985	-	96	91.591	ENSXCOG00000015275	-	90	91.489	Xiphophorus_couchianus
ENSACIG00000010985	-	100	97.563	ENSXMAG00000002540	-	93	97.563	Xiphophorus_maculatus
ENSACIG00000010985	-	100	91.797	ENSXMAG00000001703	-	93	91.699	Xiphophorus_maculatus