EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000011024 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: si:dkey-13a21.4
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4745 bases
Position: chrCCOE01001335.1:559242-563986
Accession: ZDB-GENE-040724-163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000014179	MMR_HSR1	PF01926.23	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000014560	-	615	-	ENSACIP00000014179	204 (aa)	-	-

Gene Model

Click here to download ENSACIG00000011024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000011024's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000011024	si:dkey-13a21.4	100	50.000	ENSACIG00000022381	-	100	50.000
ENSACIG00000011024	si:dkey-13a21.4	95	31.553	ENSACIG00000013119	-	87	31.553
ENSACIG00000011024	si:dkey-13a21.4	81	36.145	ENSACIG00000019803	rab25a	76	36.145
ENSACIG00000011024	si:dkey-13a21.4	76	38.462	ENSACIG00000003157	-	80	38.462
ENSACIG00000011024	si:dkey-13a21.4	81	37.952	ENSACIG00000017414	rab25b	78	37.952
ENSACIG00000011024	si:dkey-13a21.4	60	34.426	ENSACIG00000015128	si:ch73-116o1.2	57	34.426
ENSACIG00000011024	si:dkey-13a21.4	92	34.375	ENSACIG00000016958	si:dkey-34d22.5	85	34.375
ENSACIG00000011024	si:dkey-13a21.4	77	38.994	ENSACIG00000003102	rab42a	72	38.994
ENSACIG00000011024	si:dkey-13a21.4	95	43.878	ENSACIG00000006558	-	98	43.878
ENSACIG00000011024	si:dkey-13a21.4	87	37.079	ENSACIG00000019251	rab5aa	82	37.079
ENSACIG00000011024	si:dkey-13a21.4	90	35.870	ENSACIG00000023222	-	78	35.870
ENSACIG00000011024	si:dkey-13a21.4	86	55.932	ENSACIG00000022208	-	85	55.932
ENSACIG00000011024	si:dkey-13a21.4	79	37.654	ENSACIG00000019049	rab1ab	81	39.516
ENSACIG00000011024	si:dkey-13a21.4	80	37.576	ENSACIG00000006949	RAB17	70	37.576
ENSACIG00000011024	si:dkey-13a21.4	77	38.125	ENSACIG00000000154	RAB39B	74	38.125
ENSACIG00000011024	si:dkey-13a21.4	79	34.356	ENSACIG00000020496	rab23	78	34.356
ENSACIG00000011024	si:dkey-13a21.4	83	38.506	ENSACIG00000021459	zgc:101559	75	38.506
ENSACIG00000011024	si:dkey-13a21.4	83	35.673	ENSACIG00000007154	rab6ba	78	35.673
ENSACIG00000011024	si:dkey-13a21.4	84	31.579	ENSACIG00000000670	rabl2	73	31.579
ENSACIG00000011024	si:dkey-13a21.4	73	39.333	ENSACIG00000021855	rab33ba	61	39.333
ENSACIG00000011024	si:dkey-13a21.4	80	36.585	ENSACIG00000010896	rab5c	74	36.585
ENSACIG00000011024	si:dkey-13a21.4	74	31.613	ENSACIG00000023481	rasl11b	61	31.613
ENSACIG00000011024	si:dkey-13a21.4	96	33.500	ENSACIG00000010914	RAB41	92	33.500
ENSACIG00000011024	si:dkey-13a21.4	63	36.154	ENSACIG00000019631	rab11bb	65	36.154
ENSACIG00000011024	si:dkey-13a21.4	95	36.082	ENSACIG00000014012	rab22a	96	36.082
ENSACIG00000011024	si:dkey-13a21.4	79	30.723	ENSACIG00000009013	nkiras1	84	30.723
ENSACIG00000011024	si:dkey-13a21.4	86	49.438	ENSACIG00000007739	rab9b	88	49.438
ENSACIG00000011024	si:dkey-13a21.4	76	34.615	ENSACIG00000014094	rab6bb	75	34.615
ENSACIG00000011024	si:dkey-13a21.4	90	54.054	ENSACIG00000013630	RAB7A	89	54.054
ENSACIG00000011024	si:dkey-13a21.4	79	35.802	ENSACIG00000014625	-	78	35.802
ENSACIG00000011024	si:dkey-13a21.4	77	35.849	ENSACIG00000023837	-	73	35.849
ENSACIG00000011024	si:dkey-13a21.4	80	34.731	ENSACIG00000024374	rab11ba	66	34.731
ENSACIG00000011024	si:dkey-13a21.4	80	34.132	ENSACIG00000024376	-	74	34.132
ENSACIG00000011024	si:dkey-13a21.4	91	37.838	ENSACIG00000008102	rab18b	89	37.838
ENSACIG00000011024	si:dkey-13a21.4	96	45.455	ENSACIG00000018043	rab9a	96	45.455
ENSACIG00000011024	si:dkey-13a21.4	77	35.625	ENSACIG00000017403	rab11al	71	35.625
ENSACIG00000011024	si:dkey-13a21.4	82	36.471	ENSACIG00000020616	rab12	68	36.471
ENSACIG00000011024	si:dkey-13a21.4	88	33.333	ENSACIG00000000642	rab36	68	33.333
ENSACIG00000011024	si:dkey-13a21.4	84	31.638	ENSACIG00000009617	rab18a	83	31.638
ENSACIG00000011024	si:dkey-13a21.4	96	37.255	ENSACIG00000022520	rab33a	88	37.255
ENSACIG00000011024	si:dkey-13a21.4	82	33.721	ENSACIG00000009139	dnajc27	62	33.721
ENSACIG00000011024	si:dkey-13a21.4	86	33.898	ENSACIG00000010619	rab15	81	33.898
ENSACIG00000011024	si:dkey-13a21.4	86	36.723	ENSACIG00000008584	rab13	83	36.723
ENSACIG00000011024	si:dkey-13a21.4	96	33.831	ENSACIG00000014605	rab6a	94	33.831
ENSACIG00000011024	si:dkey-13a21.4	97	30.622	ENSACIG00000004859	rab34b	85	30.374
ENSACIG00000011024	si:dkey-13a21.4	79	37.654	ENSACIG00000009006	zgc:171927	74	37.654
ENSACIG00000011024	si:dkey-13a21.4	75	34.591	ENSACIG00000008620	rab34a	70	34.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000011024	si:dkey-13a21.4	100	87.255	ENSAOCG00000020491	si:dkey-13a21.4	100	87.255	Amphiprion_ocellaris
ENSACIG00000011024	si:dkey-13a21.4	100	87.255	ENSAPEG00000023338	si:dkey-13a21.4	92	87.255	Amphiprion_percula
ENSACIG00000011024	si:dkey-13a21.4	100	84.314	ENSATEG00000014958	si:dkey-13a21.4	100	84.314	Anabas_testudineus
ENSACIG00000011024	si:dkey-13a21.4	96	51.795	ENSACAG00000012345	-	97	51.795	Anolis_carolinensis
ENSACIG00000011024	si:dkey-13a21.4	100	91.667	ENSACLG00000021109	si:dkey-13a21.4	99	91.667	Astatotilapia_calliptera
ENSACIG00000011024	si:dkey-13a21.4	100	54.028	ENSAMXG00000032663	si:dkey-13a21.4	97	54.028	Astyanax_mexicanus
ENSACIG00000011024	si:dkey-13a21.4	89	56.284	WBGene00004271	rab-7	100	51.196	Caenorhabditis_elegans
ENSACIG00000011024	si:dkey-13a21.4	100	86.275	ENSCVAG00000001150	si:dkey-13a21.4	100	86.275	Cyprinodon_variegatus
ENSACIG00000011024	si:dkey-13a21.4	100	62.255	ENSDARG00000026098	si:dkey-13a21.4	99	62.255	Danio_rerio
ENSACIG00000011024	si:dkey-13a21.4	87	52.778	ENSDNOG00000043559	-	96	50.000	Dasypus_novemcinctus
ENSACIG00000011024	si:dkey-13a21.4	100	83.902	ENSFHEG00000002502	si:dkey-13a21.4	100	83.902	Fundulus_heteroclitus
ENSACIG00000011024	si:dkey-13a21.4	100	81.373	ENSGAFG00000020102	si:dkey-13a21.4	100	81.373	Gambusia_affinis
ENSACIG00000011024	si:dkey-13a21.4	100	92.157	ENSHBUG00000014023	si:dkey-13a21.4	99	92.157	Haplochromis_burtoni
ENSACIG00000011024	si:dkey-13a21.4	86	80.114	ENSKMAG00000021039	si:dkey-13a21.4	74	80.114	Kryptolebias_marmoratus
ENSACIG00000011024	si:dkey-13a21.4	100	85.294	ENSLBEG00000018180	si:dkey-13a21.4	100	85.294	Labrus_bergylta
ENSACIG00000011024	si:dkey-13a21.4	100	59.709	ENSLOCG00000014749	si:dkey-13a21.4	100	59.709	Lepisosteus_oculatus
ENSACIG00000011024	si:dkey-13a21.4	84	54.971	ENSLAFG00000028984	-	83	54.971	Loxodonta_africana
ENSACIG00000011024	si:dkey-13a21.4	100	87.745	ENSMAMG00000021095	si:dkey-13a21.4	100	87.745	Mastacembelus_armatus
ENSACIG00000011024	si:dkey-13a21.4	100	91.667	ENSMZEG00005010220	si:dkey-13a21.4	99	91.667	Maylandia_zebra
ENSACIG00000011024	si:dkey-13a21.4	99	91.133	ENSNBRG00000023214	si:dkey-13a21.4	99	91.133	Neolamprologus_brichardi
ENSACIG00000011024	si:dkey-13a21.4	100	90.686	ENSONIG00000020296	si:dkey-13a21.4	100	90.686	Oreochromis_niloticus
ENSACIG00000011024	si:dkey-13a21.4	100	80.882	ENSORLG00000025098	si:dkey-13a21.4	100	80.882	Oryzias_latipes
ENSACIG00000011024	si:dkey-13a21.4	100	80.882	ENSORLG00020019465	si:dkey-13a21.4	100	80.882	Oryzias_latipes_hni
ENSACIG00000011024	si:dkey-13a21.4	100	81.373	ENSORLG00015015121	si:dkey-13a21.4	100	81.373	Oryzias_latipes_hsok
ENSACIG00000011024	si:dkey-13a21.4	96	63.959	ENSPKIG00000008691	si:dkey-13a21.4	96	63.959	Paramormyrops_kingsleyae
ENSACIG00000011024	si:dkey-13a21.4	99	77.612	ENSPMGG00000023170	si:dkey-13a21.4	96	77.612	Periophthalmus_magnuspinnatus
ENSACIG00000011024	si:dkey-13a21.4	100	82.843	ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	Poecilia_formosa
ENSACIG00000011024	si:dkey-13a21.4	100	82.843	ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	Poecilia_latipinna
ENSACIG00000011024	si:dkey-13a21.4	100	82.843	ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	Poecilia_mexicana
ENSACIG00000011024	si:dkey-13a21.4	100	81.373	ENSPREG00000022241	si:dkey-13a21.4	100	81.373	Poecilia_reticulata
ENSACIG00000011024	si:dkey-13a21.4	100	91.667	ENSPNYG00000018613	si:dkey-13a21.4	99	91.667	Pundamilia_nyererei
ENSACIG00000011024	si:dkey-13a21.4	100	44.762	YML001W	YPT7	100	44.762	Saccharomyces_cerevisiae
ENSACIG00000011024	si:dkey-13a21.4	96	63.776	ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	Scleropages_formosus
ENSACIG00000011024	si:dkey-13a21.4	97	84.343	ENSSMAG00000013945	si:dkey-13a21.4	96	84.343	Scophthalmus_maximus
ENSACIG00000011024	si:dkey-13a21.4	100	91.667	ENSSDUG00000019738	si:dkey-13a21.4	100	91.667	Seriola_dumerili
ENSACIG00000011024	si:dkey-13a21.4	100	90.686	ENSSLDG00000011597	si:dkey-13a21.4	100	90.686	Seriola_lalandi_dorsalis
ENSACIG00000011024	si:dkey-13a21.4	96	50.769	ENSXETG00000014257	mgc75872	97	50.769	Xenopus_tropicalis