EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000011053 (Gene tree)
Gene ID: -
Gene Symbol: rbm12
Alias: zgc:193560|zgc:193570
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2697 bases
Position: chrCCOE01001210.1:1243798-1246494
Accession: ZDB-GENE-081022-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000014200	RRM_1	PF00076.22	1.3e-34	1	4
ENSACIP00000014200	RRM_1	PF00076.22	1.3e-34	2	4
ENSACIP00000014200	RRM_1	PF00076.22	1.3e-34	3	4
ENSACIP00000014200	RRM_1	PF00076.22	1.3e-34	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000014581	-	2697	-	ENSACIP00000014200	898 (aa)	-	-

Gene Model

Click here to download ENSACIG00000011053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000011053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000011053	rbm12	100	89.579	ENSAOCG00000019579	rbm12	100	89.789	Amphiprion_ocellaris
ENSACIG00000011053	rbm12	100	59.788	ENSDARG00000100636	rbm12	100	59.765	Danio_rerio
ENSACIG00000011053	rbm12	54	84.043	ENSEBUG00000016806	rbm12	72	84.043	Eptatretus_burgeri
ENSACIG00000011053	rbm12	100	46.623	ENSFALG00000012516	RBM12	100	45.680	Ficedula_albicollis
ENSACIG00000011053	rbm12	100	86.615	ENSGACG00000004202	rbm12	98	85.604	Gasterosteus_aculeatus
ENSACIG00000011053	rbm12	100	61.211	ENSIPUG00000014491	rbm12	100	60.893	Ictalurus_punctatus
ENSACIG00000011053	rbm12	50	67.059	ENSJJAG00000009879	-	78	67.059	Jaculus_jaculus
ENSACIG00000011053	rbm12	72	56.732	ENSLOCG00000018363	rbm12	100	59.149	Lepisosteus_oculatus
ENSACIG00000011053	rbm12	65	84.173	ENSMAMG00000001497	rbm12	94	84.173	Mastacembelus_armatus
ENSACIG00000011053	rbm12	100	85.033	ENSMMOG00000013495	rbm12	100	85.255	Mola_mola
ENSACIG00000011053	rbm12	50	83.796	ENSMALG00000022679	rbm12	100	84.539	Monopterus_albus
ENSACIG00000011053	rbm12	100	81.057	ENSOMEG00000008238	rbm12	100	81.477	Oryzias_melastigma
ENSACIG00000011053	rbm12	67	76.829	ENSPSIG00000007369	RBM12	91	63.158	Pelodiscus_sinensis
ENSACIG00000011053	rbm12	91	75.000	ENSPFOG00000023551	rbm12	97	76.963	Poecilia_formosa
ENSACIG00000011053	rbm12	100	45.329	ENSXETG00000033541	RBM12	100	43.210	Xenopus_tropicalis
ENSACIG00000011053	rbm12	99	84.573	ENSXCOG00000014073	rbm12	99	83.130	Xiphophorus_couchianus