EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000011531 (Gene tree)
Gene ID: -
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 6956 bases
Position: chrCCOE01001720.1:1128443-1135398
Accession: ZDB-GENE-030131-9612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000014846	RRM_1	PF00076.22	1.8e-40	1	3
ENSACIP00000014846	RRM_1	PF00076.22	1.8e-40	2	3
ENSACIP00000014846	RRM_1	PF00076.22	1.8e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000015242	-	1770	-	ENSACIP00000014846	589 (aa)	-	-

Gene Model

Click here to download ENSACIG00000011531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000011531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000011531	rbm47	51	52.980	ENSACIG00000002117	syncrip	69	45.519
ENSACIG00000011531	rbm47	51	53.311	ENSACIG00000023552	syncripl	72	46.305
ENSACIG00000011531	rbm47	80	51.020	ENSACIG00000008632	a1cf	88	52.612
ENSACIG00000011531	rbm47	52	48.958	ENSACIG00000010706	hnrnpr	60	40.385
ENSACIG00000011531	rbm47	52	65.161	ENSACIG00000014500	rbm46	65	66.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000011531	rbm47	100	81.915	ENSG00000163694	RBM47	100	85.253	Homo_sapiens
ENSACIG00000011531	rbm47	100	94.266	ENSAPOG00000011062	rbm47	100	94.435	Acanthochromis_polyacanthus
ENSACIG00000011531	rbm47	100	74.542	ENSAMEG00000009672	RBM47	100	76.119	Ailuropoda_melanoleuca
ENSACIG00000011531	rbm47	100	96.610	ENSAOCG00000022245	rbm47	100	96.610	Amphiprion_ocellaris
ENSACIG00000011531	rbm47	100	96.774	ENSAPEG00000018304	rbm47	100	96.774	Amphiprion_percula
ENSACIG00000011531	rbm47	100	92.904	ENSATEG00000018400	rbm47	100	92.739	Anabas_testudineus
ENSACIG00000011531	rbm47	100	76.000	ENSAPLG00000013974	RBM47	100	76.333	Anas_platyrhynchos
ENSACIG00000011531	rbm47	100	75.707	ENSACAG00000011833	RBM47	100	76.040	Anolis_carolinensis
ENSACIG00000011531	rbm47	100	83.467	ENSANAG00000029440	RBM47	100	84.533	Aotus_nancymaae
ENSACIG00000011531	rbm47	100	94.079	ENSACLG00000016902	rbm47	100	94.079	Astatotilapia_calliptera
ENSACIG00000011531	rbm47	97	85.294	ENSAMXG00000021794	rbm47	100	81.311	Astyanax_mexicanus
ENSACIG00000011531	rbm47	100	76.846	ENSBTAG00000002356	RBM47	100	77.517	Bos_taurus
ENSACIG00000011531	rbm47	98	84.530	ENSCJAG00000019385	RBM47	100	84.800	Callithrix_jacchus
ENSACIG00000011531	rbm47	97	77.391	ENSCAFG00000015898	RBM47	100	76.254	Canis_familiaris
ENSACIG00000011531	rbm47	83	79.675	ENSCAFG00020010558	RBM47	94	82.493	Canis_lupus_dingo
ENSACIG00000011531	rbm47	100	76.846	ENSCHIG00000026214	RBM47	100	77.517	Capra_hircus
ENSACIG00000011531	rbm47	86	86.996	ENSTSYG00000033612	RBM47	93	85.841	Carlito_syrichta
ENSACIG00000011531	rbm47	100	71.765	ENSCAPG00000008426	RBM47	100	71.933	Cavia_aperea
ENSACIG00000011531	rbm47	100	83.200	ENSCPOG00000014100	RBM47	100	77.852	Cavia_porcellus
ENSACIG00000011531	rbm47	100	84.267	ENSCCAG00000030129	-	100	84.267	Cebus_capucinus
ENSACIG00000011531	rbm47	99	56.639	ENSCCAG00000024397	-	99	55.798	Cebus_capucinus
ENSACIG00000011531	rbm47	100	81.915	ENSCATG00000042064	RBM47	100	84.840	Cercocebus_atys
ENSACIG00000011531	rbm47	100	82.493	ENSCLAG00000001684	RBM47	100	83.544	Chinchilla_lanigera
ENSACIG00000011531	rbm47	100	75.418	ENSCSAG00000017060	RBM47	100	77.167	Chlorocebus_sabaeus
ENSACIG00000011531	rbm47	89	75.000	ENSCHOG00000011731	RBM47	88	77.354	Choloepus_hoffmanni
ENSACIG00000011531	rbm47	100	79.000	ENSCPBG00000013831	RBM47	100	79.000	Chrysemys_picta_bellii
ENSACIG00000011531	rbm47	100	83.069	ENSCANG00000019997	RBM47	100	84.840	Colobus_angolensis_palliatus
ENSACIG00000011531	rbm47	100	77.719	ENSCGRG00001020102	-	100	79.310	Cricetulus_griseus_chok1gshd
ENSACIG00000011531	rbm47	100	82.979	ENSCGRG00001000623	-	100	84.043	Cricetulus_griseus_chok1gshd
ENSACIG00000011531	rbm47	100	77.454	ENSCGRG00000014760	-	100	79.045	Cricetulus_griseus_crigri
ENSACIG00000011531	rbm47	100	75.042	ENSCGRG00000007762	-	100	81.013	Cricetulus_griseus_crigri
ENSACIG00000011531	rbm47	100	90.694	ENSCSEG00000004545	rbm47	100	90.694	Cynoglossus_semilaevis
ENSACIG00000011531	rbm47	100	91.681	ENSCVAG00000020144	rbm47	100	91.681	Cyprinodon_variegatus
ENSACIG00000011531	rbm47	100	81.743	ENSDARG00000061985	rbm47	100	81.414	Danio_rerio
ENSACIG00000011531	rbm47	100	76.303	ENSDNOG00000046854	RBM47	100	77.143	Dasypus_novemcinctus
ENSACIG00000011531	rbm47	100	75.914	ENSDORG00000010144	Rbm47	100	76.246	Dipodomys_ordii
ENSACIG00000011531	rbm47	97	77.241	ENSETEG00000009194	RBM47	100	76.872	Echinops_telfairi
ENSACIG00000011531	rbm47	99	57.903	ENSEBUG00000011912	rbm47	99	58.000	Eptatretus_burgeri
ENSACIG00000011531	rbm47	100	76.678	ENSEASG00005008443	RBM47	100	77.517	Equus_asinus_asinus
ENSACIG00000011531	rbm47	100	76.678	ENSECAG00000004400	RBM47	100	77.517	Equus_caballus
ENSACIG00000011531	rbm47	75	83.117	ENSEEUG00000001194	RBM47	75	85.281	Erinaceus_europaeus
ENSACIG00000011531	rbm47	100	81.037	ENSELUG00000006148	rbm47	100	86.650	Esox_lucius
ENSACIG00000011531	rbm47	100	76.599	ENSFCAG00000012399	RBM47	100	77.946	Felis_catus
ENSACIG00000011531	rbm47	100	78.667	ENSFALG00000002861	RBM47	100	78.667	Ficedula_albicollis
ENSACIG00000011531	rbm47	100	81.963	ENSFDAG00000016326	RBM47	100	81.963	Fukomys_damarensis
ENSACIG00000011531	rbm47	100	90.832	ENSFHEG00000007938	rbm47	100	90.323	Fundulus_heteroclitus
ENSACIG00000011531	rbm47	100	82.039	ENSGMOG00000014802	rbm47	100	81.230	Gadus_morhua
ENSACIG00000011531	rbm47	63	85.185	ENSGALG00000014267	RBM47	99	85.185	Gallus_gallus
ENSACIG00000011531	rbm47	63	92.703	ENSGAFG00000020571	rbm47	98	92.453	Gambusia_affinis
ENSACIG00000011531	rbm47	100	89.638	ENSGACG00000016223	rbm47	100	89.638	Gasterosteus_aculeatus
ENSACIG00000011531	rbm47	100	79.000	ENSGAGG00000020051	RBM47	100	79.000	Gopherus_agassizii
ENSACIG00000011531	rbm47	100	81.915	ENSGGOG00000001367	RBM47	100	84.840	Gorilla_gorilla
ENSACIG00000011531	rbm47	100	94.098	ENSHBUG00000003520	rbm47	100	94.098	Haplochromis_burtoni
ENSACIG00000011531	rbm47	84	64.721	ENSHGLG00000016914	RBM47	100	80.625	Heterocephalus_glaber_female
ENSACIG00000011531	rbm47	100	69.514	ENSHGLG00100003071	-	100	69.179	Heterocephalus_glaber_male
ENSACIG00000011531	rbm47	100	83.024	ENSHGLG00100014028	-	100	83.024	Heterocephalus_glaber_male
ENSACIG00000011531	rbm47	99	92.399	ENSHCOG00000002074	rbm47	99	92.230	Hippocampus_comes
ENSACIG00000011531	rbm47	100	85.473	ENSIPUG00000004743	rbm47	100	84.797	Ictalurus_punctatus
ENSACIG00000011531	rbm47	100	81.167	ENSSTOG00000004727	RBM47	100	83.820	Ictidomys_tridecemlineatus
ENSACIG00000011531	rbm47	100	75.374	ENSJJAG00000013823	Rbm47	100	75.707	Jaculus_jaculus
ENSACIG00000011531	rbm47	100	91.611	ENSKMAG00000000084	rbm47	100	91.275	Kryptolebias_marmoratus
ENSACIG00000011531	rbm47	100	92.230	ENSLBEG00000008436	rbm47	100	92.061	Labrus_bergylta
ENSACIG00000011531	rbm47	100	79.160	ENSLACG00000007196	RBM47	100	79.328	Latimeria_chalumnae
ENSACIG00000011531	rbm47	100	82.997	ENSLOCG00000012966	rbm47	95	81.282	Lepisosteus_oculatus
ENSACIG00000011531	rbm47	100	76.461	ENSLAFG00000011998	RBM47	100	76.962	Loxodonta_africana
ENSACIG00000011531	rbm47	100	81.915	ENSMFAG00000037967	RBM47	100	84.840	Macaca_fascicularis
ENSACIG00000011531	rbm47	100	75.418	ENSMMUG00000012036	RBM47	100	83.420	Macaca_mulatta
ENSACIG00000011531	rbm47	100	81.649	ENSMNEG00000040774	RBM47	100	84.840	Macaca_nemestrina
ENSACIG00000011531	rbm47	100	84.127	ENSMLEG00000041432	RBM47	100	86.032	Mandrillus_leucophaeus
ENSACIG00000011531	rbm47	100	92.066	ENSMAMG00000019143	rbm47	100	92.066	Mastacembelus_armatus
ENSACIG00000011531	rbm47	100	94.079	ENSMZEG00005023659	rbm47	100	94.079	Maylandia_zebra
ENSACIG00000011531	rbm47	100	78.239	ENSMGAG00000012226	RBM47	100	78.239	Meleagris_gallopavo
ENSACIG00000011531	rbm47	100	82.058	ENSMAUG00000006493	Rbm47	100	83.113	Mesocricetus_auratus
ENSACIG00000011531	rbm47	100	79.733	ENSMICG00000026417	RBM47	100	82.620	Microcebus_murinus
ENSACIG00000011531	rbm47	100	82.275	ENSMOCG00000021170	Rbm47	100	83.333	Microtus_ochrogaster
ENSACIG00000011531	rbm47	100	90.413	ENSMMOG00000007260	rbm47	100	90.248	Mola_mola
ENSACIG00000011531	rbm47	100	73.322	ENSMODG00000020561	-	100	72.651	Monodelphis_domestica
ENSACIG00000011531	rbm47	100	77.629	ENSMODG00000007003	RBM47	100	77.462	Monodelphis_domestica
ENSACIG00000011531	rbm47	52	79.100	ENSMODG00000015426	-	97	79.100	Monodelphis_domestica
ENSACIG00000011531	rbm47	100	93.548	ENSMALG00000005167	rbm47	100	93.209	Monopterus_albus
ENSACIG00000011531	rbm47	100	82.713	MGP_CAROLIEiJ_G0027258	Rbm47	100	83.777	Mus_caroli
ENSACIG00000011531	rbm47	100	82.713	ENSMUSG00000070780	Rbm47	100	83.777	Mus_musculus
ENSACIG00000011531	rbm47	100	82.979	MGP_PahariEiJ_G0017040	Rbm47	100	84.043	Mus_pahari
ENSACIG00000011531	rbm47	100	82.713	MGP_SPRETEiJ_G0028253	Rbm47	100	83.777	Mus_spretus
ENSACIG00000011531	rbm47	100	75.251	ENSMPUG00000006177	RBM47	94	76.421	Mustela_putorius_furo
ENSACIG00000011531	rbm47	100	76.589	ENSMLUG00000000889	RBM47	100	76.589	Myotis_lucifugus
ENSACIG00000011531	rbm47	100	75.167	ENSNGAG00000003325	Rbm47	100	75.667	Nannospalax_galili
ENSACIG00000011531	rbm47	100	94.417	ENSNBRG00000015092	rbm47	100	94.417	Neolamprologus_brichardi
ENSACIG00000011531	rbm47	100	81.915	ENSNLEG00000017151	RBM47	100	84.840	Nomascus_leucogenys
ENSACIG00000011531	rbm47	72	79.907	ENSMEUG00000009516	-	99	79.907	Notamacropus_eugenii
ENSACIG00000011531	rbm47	75	86.777	ENSOPRG00000016507	-	75	86.777	Ochotona_princeps
ENSACIG00000011531	rbm47	100	76.134	ENSODEG00000004873	RBM47	100	77.983	Octodon_degus
ENSACIG00000011531	rbm47	100	94.079	ENSONIG00000009061	rbm47	100	94.079	Oreochromis_niloticus
ENSACIG00000011531	rbm47	100	76.246	ENSOANG00000008978	RBM47	100	77.129	Ornithorhynchus_anatinus
ENSACIG00000011531	rbm47	100	76.421	ENSOCUG00000012034	RBM47	100	77.090	Oryctolagus_cuniculus
ENSACIG00000011531	rbm47	100	92.555	ENSORLG00000005847	rbm47	100	92.217	Oryzias_latipes
ENSACIG00000011531	rbm47	100	92.386	ENSORLG00020005154	rbm47	100	92.047	Oryzias_latipes_hni
ENSACIG00000011531	rbm47	100	92.217	ENSORLG00015000066	rbm47	100	92.217	Oryzias_latipes_hsok
ENSACIG00000011531	rbm47	100	92.881	ENSOMEG00000010730	rbm47	100	92.712	Oryzias_melastigma
ENSACIG00000011531	rbm47	100	75.084	ENSOGAG00000029367	-	100	76.421	Otolemur_garnettii
ENSACIG00000011531	rbm47	100	70.707	ENSOGAG00000025193	-	100	71.886	Otolemur_garnettii
ENSACIG00000011531	rbm47	100	68.960	ENSOARG00000012711	RBM47	100	69.631	Ovis_aries
ENSACIG00000011531	rbm47	100	76.391	ENSPPAG00000029763	RBM47	95	84.840	Pan_paniscus
ENSACIG00000011531	rbm47	100	81.794	ENSPPRG00000012873	RBM47	100	84.000	Panthera_pardus
ENSACIG00000011531	rbm47	86	76.040	ENSPTIG00000017046	RBM47	100	75.644	Panthera_tigris_altaica
ENSACIG00000011531	rbm47	100	81.915	ENSPTRG00000016006	RBM47	100	84.840	Pan_troglodytes
ENSACIG00000011531	rbm47	100	81.915	ENSPANG00000005980	RBM47	100	84.840	Papio_anubis
ENSACIG00000011531	rbm47	100	76.936	ENSPKIG00000013431	RBM47	98	84.935	Paramormyrops_kingsleyae
ENSACIG00000011531	rbm47	97	80.936	ENSPKIG00000005037	rbm47	100	77.980	Paramormyrops_kingsleyae
ENSACIG00000011531	rbm47	89	80.791	ENSPSIG00000017516	RBM47	97	80.791	Pelodiscus_sinensis
ENSACIG00000011531	rbm47	100	91.171	ENSPMGG00000018540	rbm47	100	91.171	Periophthalmus_magnuspinnatus
ENSACIG00000011531	rbm47	100	82.275	ENSPEMG00000011088	Rbm47	100	83.333	Peromyscus_maniculatus_bairdii
ENSACIG00000011531	rbm47	97	90.121	ENSPFOG00000007997	rbm47	100	87.092	Poecilia_formosa
ENSACIG00000011531	rbm47	97	90.451	ENSPLAG00000002072	rbm47	100	92.432	Poecilia_latipinna
ENSACIG00000011531	rbm47	100	89.713	ENSPMEG00000017492	rbm47	100	89.713	Poecilia_mexicana
ENSACIG00000011531	rbm47	97	90.451	ENSPREG00000008456	rbm47	100	92.162	Poecilia_reticulata
ENSACIG00000011531	rbm47	99	67.568	ENSPPYG00000014688	RBM47	100	68.013	Pongo_abelii
ENSACIG00000011531	rbm47	81	81.955	ENSPCAG00000011879	RBM47	81	84.461	Procavia_capensis
ENSACIG00000011531	rbm47	100	81.383	ENSPCOG00000023451	RBM47	100	83.511	Propithecus_coquereli
ENSACIG00000011531	rbm47	100	75.292	ENSPVAG00000003812	RBM47	100	76.628	Pteropus_vampyrus
ENSACIG00000011531	rbm47	100	93.781	ENSPNYG00000022868	rbm47	100	93.781	Pundamilia_nyererei
ENSACIG00000011531	rbm47	100	83.770	ENSPNAG00000007940	rbm47	100	83.279	Pygocentrus_nattereri
ENSACIG00000011531	rbm47	100	75.500	ENSRNOG00000002408	Rbm47	100	76.500	Rattus_norvegicus
ENSACIG00000011531	rbm47	100	83.069	ENSRBIG00000039601	RBM47	100	84.840	Rhinopithecus_bieti
ENSACIG00000011531	rbm47	100	83.069	ENSRROG00000044696	RBM47	100	84.840	Rhinopithecus_roxellana
ENSACIG00000011531	rbm47	100	74.579	ENSSBOG00000028475	RBM47	100	80.825	Saimiri_boliviensis_boliviensis
ENSACIG00000011531	rbm47	100	77.889	ENSSHAG00000017576	RBM47	100	77.889	Sarcophilus_harrisii
ENSACIG00000011531	rbm47	100	79.008	ENSSFOG00015012445	rbm47	100	78.017	Scleropages_formosus
ENSACIG00000011531	rbm47	99	80.068	ENSSFOG00015024101	RBM47	98	79.046	Scleropages_formosus
ENSACIG00000011531	rbm47	100	90.099	ENSSMAG00000009744	rbm47	100	89.934	Scophthalmus_maximus
ENSACIG00000011531	rbm47	100	93.750	ENSSDUG00000022684	rbm47	100	93.750	Seriola_dumerili
ENSACIG00000011531	rbm47	100	94.907	ENSSLDG00000003109	rbm47	100	94.907	Seriola_lalandi_dorsalis
ENSACIG00000011531	rbm47	85	79.955	ENSSARG00000001735	RBM47	75	82.183	Sorex_araneus
ENSACIG00000011531	rbm47	100	83.947	ENSSPUG00000007515	RBM47	100	84.392	Sphenodon_punctatus
ENSACIG00000011531	rbm47	100	96.774	ENSSPAG00000001257	rbm47	100	96.774	Stegastes_partitus
ENSACIG00000011531	rbm47	100	82.275	ENSSSCG00000008796	RBM47	100	77.181	Sus_scrofa
ENSACIG00000011531	rbm47	100	78.297	ENSTGUG00000008705	RBM47	100	79.466	Taeniopygia_guttata
ENSACIG00000011531	rbm47	100	89.813	ENSTRUG00000014050	rbm47	100	89.813	Takifugu_rubripes
ENSACIG00000011531	rbm47	100	88.760	ENSTNIG00000006127	rbm47	100	88.760	Tetraodon_nigroviridis
ENSACIG00000011531	rbm47	77	80.749	ENSTBEG00000001607	RBM47	76	82.667	Tupaia_belangeri
ENSACIG00000011531	rbm47	100	77.815	ENSTTRG00000002839	RBM47	100	77.647	Tursiops_truncatus
ENSACIG00000011531	rbm47	100	76.254	ENSUAMG00000021346	RBM47	100	76.589	Ursus_americanus
ENSACIG00000011531	rbm47	57	76.027	ENSVPAG00000000641	-	56	80.000	Vicugna_pacos
ENSACIG00000011531	rbm47	97	77.836	ENSVVUG00000014774	RBM47	100	76.549	Vulpes_vulpes
ENSACIG00000011531	rbm47	100	77.667	ENSXETG00000012802	rbm47	100	77.000	Xenopus_tropicalis
ENSACIG00000011531	rbm47	100	92.703	ENSXCOG00000000780	rbm47	100	92.703	Xiphophorus_couchianus
ENSACIG00000011531	rbm47	97	94.068	ENSXMAG00000009874	rbm47	100	90.339	Xiphophorus_maculatus