EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000011566 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: si:ch211-113e8.11
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4281 bases
Position: chrCCOE01001720.1:1148120-1152400
Accession: ZDB-GENE-090313-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000014882	zf-CCCH	PF00642.24	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000015280	-	588	-	ENSACIP00000014882	195 (aa)	-	-

Gene Model

Click here to download ENSACIG00000011566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000011566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000011566	si:ch211-113e8.11	79	78.710	ENSAPOG00000010990	si:ch211-113e8.11	56	82.192	Acanthochromis_polyacanthus
ENSACIG00000011566	si:ch211-113e8.11	94	66.038	ENSAOCG00000022156	si:ch211-113e8.11	57	81.507	Amphiprion_ocellaris
ENSACIG00000011566	si:ch211-113e8.11	94	66.038	ENSAPEG00000018284	si:ch211-113e8.11	56	82.069	Amphiprion_percula
ENSACIG00000011566	si:ch211-113e8.11	94	64.115	ENSATEG00000018391	si:ch211-113e8.11	57	68.493	Anabas_testudineus
ENSACIG00000011566	si:ch211-113e8.11	94	76.650	ENSACLG00000017011	si:ch211-113e8.11	81	71.574	Astatotilapia_calliptera
ENSACIG00000011566	si:ch211-113e8.11	83	46.597	ENSAMXG00000000733	si:ch211-113e8.11	63	52.761	Astyanax_mexicanus
ENSACIG00000011566	si:ch211-113e8.11	95	55.760	ENSCSEG00000004538	si:ch211-113e8.11	57	62.329	Cynoglossus_semilaevis
ENSACIG00000011566	si:ch211-113e8.11	94	59.903	ENSCVAG00000020156	si:ch211-113e8.11	56	67.586	Cyprinodon_variegatus
ENSACIG00000011566	si:ch211-113e8.11	68	58.209	ENSDARG00000076585	si:ch211-113e8.11	64	56.494	Danio_rerio
ENSACIG00000011566	si:ch211-113e8.11	81	34.940	FBgn0259728	CG42382	61	32.836	Drosophila_melanogaster
ENSACIG00000011566	si:ch211-113e8.11	94	52.778	ENSELUG00000001130	si:ch211-113e8.11	58	59.603	Esox_lucius
ENSACIG00000011566	si:ch211-113e8.11	94	58.883	ENSFHEG00000007870	si:ch211-113e8.11	60	61.224	Fundulus_heteroclitus
ENSACIG00000011566	si:ch211-113e8.11	74	73.793	ENSGAFG00000020570	si:ch211-113e8.11	58	72.414	Gambusia_affinis
ENSACIG00000011566	si:ch211-113e8.11	94	75.127	ENSHBUG00000003552	si:ch211-113e8.11	81	71.066	Haplochromis_burtoni
ENSACIG00000011566	si:ch211-113e8.11	95	58.794	ENSHCOG00000002041	si:ch211-113e8.11	81	56.784	Hippocampus_comes
ENSACIG00000011566	si:ch211-113e8.11	75	51.678	ENSIPUG00000002260	si:ch211-113e8.11	58	51.948	Ictalurus_punctatus
ENSACIG00000011566	si:ch211-113e8.11	94	64.677	ENSKMAG00000000086	si:ch211-113e8.11	59	72.414	Kryptolebias_marmoratus
ENSACIG00000011566	si:ch211-113e8.11	79	65.605	ENSLBEG00000008353	si:ch211-113e8.11	55	65.541	Labrus_bergylta
ENSACIG00000011566	si:ch211-113e8.11	81	42.012	ENSLACG00000004304	si:ch211-113e8.11	69	43.357	Latimeria_chalumnae
ENSACIG00000011566	si:ch211-113e8.11	92	62.559	ENSMAMG00000019098	si:ch211-113e8.11	59	70.748	Mastacembelus_armatus
ENSACIG00000011566	si:ch211-113e8.11	94	77.157	ENSMZEG00005023658	si:ch211-113e8.11	84	72.081	Maylandia_zebra
ENSACIG00000011566	si:ch211-113e8.11	74	70.833	ENSMMOG00000007254	si:ch211-113e8.11	67	70.833	Mola_mola
ENSACIG00000011566	si:ch211-113e8.11	94	61.927	ENSMALG00000005110	si:ch211-113e8.11	60	70.068	Monopterus_albus
ENSACIG00000011566	si:ch211-113e8.11	94	77.157	ENSNBRG00000015060	si:ch211-113e8.11	81	72.081	Neolamprologus_brichardi
ENSACIG00000011566	si:ch211-113e8.11	91	61.224	ENSORLG00000023699	si:ch211-113e8.11	58	66.438	Oryzias_latipes
ENSACIG00000011566	si:ch211-113e8.11	91	61.421	ENSORLG00020022094	si:ch211-113e8.11	57	67.808	Oryzias_latipes_hni
ENSACIG00000011566	si:ch211-113e8.11	91	60.204	ENSORLG00015002588	si:ch211-113e8.11	58	65.517	Oryzias_latipes_hsok
ENSACIG00000011566	si:ch211-113e8.11	93	55.721	ENSOMEG00000010624	si:ch211-113e8.11	58	66.207	Oryzias_melastigma
ENSACIG00000011566	si:ch211-113e8.11	67	53.383	ENSPKIG00000023576	si:ch211-113e8.11	58	48.000	Paramormyrops_kingsleyae
ENSACIG00000011566	si:ch211-113e8.11	93	56.853	ENSPMGG00000018547	si:ch211-113e8.11	64	66.216	Periophthalmus_magnuspinnatus
ENSACIG00000011566	si:ch211-113e8.11	74	75.172	ENSPFOG00000007950	si:ch211-113e8.11	59	73.793	Poecilia_formosa
ENSACIG00000011566	si:ch211-113e8.11	74	75.172	ENSPLAG00000002081	si:ch211-113e8.11	58	73.793	Poecilia_latipinna
ENSACIG00000011566	si:ch211-113e8.11	94	65.049	ENSPMEG00000017505	si:ch211-113e8.11	58	74.483	Poecilia_mexicana
ENSACIG00000011566	si:ch211-113e8.11	94	66.000	ENSPREG00000008530	si:ch211-113e8.11	59	73.103	Poecilia_reticulata
ENSACIG00000011566	si:ch211-113e8.11	94	77.157	ENSPNYG00000022856	si:ch211-113e8.11	81	72.081	Pundamilia_nyererei
ENSACIG00000011566	si:ch211-113e8.11	68	52.593	ENSPNAG00000013782	si:ch211-113e8.11	63	51.613	Pygocentrus_nattereri
ENSACIG00000011566	si:ch211-113e8.11	92	48.705	ENSSFOG00015000959	si:ch211-113e8.11	58	50.000	Scleropages_formosus
ENSACIG00000011566	si:ch211-113e8.11	70	70.629	ENSSMAG00000009732	si:ch211-113e8.11	62	70.470	Scophthalmus_maximus
ENSACIG00000011566	si:ch211-113e8.11	94	64.151	ENSSDUG00000000112	si:ch211-113e8.11	59	71.812	Seriola_dumerili
ENSACIG00000011566	si:ch211-113e8.11	94	64.151	ENSSLDG00000003287	si:ch211-113e8.11	59	71.812	Seriola_lalandi_dorsalis
ENSACIG00000011566	si:ch211-113e8.11	94	63.551	ENSSPAG00000001375	si:ch211-113e8.11	56	75.172	Stegastes_partitus
ENSACIG00000011566	si:ch211-113e8.11	74	65.278	ENSTRUG00000023898	si:ch211-113e8.11	58	65.278	Takifugu_rubripes
ENSACIG00000011566	si:ch211-113e8.11	94	63.107	ENSXMAG00000024104	si:ch211-113e8.11	58	72.414	Xiphophorus_maculatus