EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000012023 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Minus strand
Length
20271 bases
Position
chrCCOE01000143.1:1220447-1240717
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000015614ResIIIPF04851.153.9e-0611
ENSACIP00000015587ResIIIPF04851.155.1e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000016080-555-ENSACIP00000015667184 (aa)--
ENSACIT00000016026-1692-ENSACIP00000015614563 (aa)--
ENSACIT00000015999-1638-ENSACIP00000015587545 (aa)--
ENSACIT00000016058-564-ENSACIP00000015646187 (aa)--
Gene Model
Click here to download ENSACIG00000012023's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012023's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000012023-8431.351ENSACIG00000005837ttf25030.263
ENSACIG00000012023-8747.120ENSACIG00000018996hells6947.120
ENSACIG00000012023-9039.192ENSACIG00000001164chd1l5241.328
ENSACIG00000012023-9044.378ENSACIG00000016982smarca55147.458
ENSACIG00000012023-9436.028ENSACIG00000018326smarcad1a7738.523
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000012023-9790.432ENSCVAG00000012049-8890.432Cyprinodon_variegatus
ENSACIG00000012023-6690.278ENSFHEG00000005432srcap5179.176Fundulus_heteroclitus
ENSACIG00000012023-6688.889ENSHCOG00000003632-5078.960Hippocampus_comes
ENSACIG00000012023-9691.667ENSLBEG00000009390-9595.686Labrus_bergylta
ENSACIG00000012023-9493.164ENSMAMG00000007069srcap9193.164Mastacembelus_armatus
ENSACIG00000012023-5190.580ENSXETG00000034041-9990.580Xenopus_tropicalis
ENSACIG00000012023-6987.533ENSXCOG00000003602srcap5181.250Xiphophorus_couchianus

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