EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000012161 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 3406 bases
Position: chrCCOE01001817.1:45105-48510
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000015656	RVT_1	PF00078.27	5.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000016069	-	3165	-	ENSACIP00000015656	1054 (aa)	-	-

Gene Model

Click here to download ENSACIG00000012161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000012161	-	91	67.525	ENSACIG00000010787	-	96	67.525
ENSACIG00000012161	-	89	81.838	ENSACIG00000013116	-	100	81.838
ENSACIG00000012161	-	100	76.471	ENSACIG00000007038	-	100	76.734
ENSACIG00000012161	-	77	76.196	ENSACIG00000009025	-	99	76.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000012161	-	81	35.591	ENSAMXG00000042811	-	77	35.591	Astyanax_mexicanus
ENSACIG00000012161	-	71	35.995	ENSCPBG00000003842	-	61	36.139	Chrysemys_picta_bellii
ENSACIG00000012161	-	90	34.716	ENSCVAG00000004138	-	98	35.000	Cyprinodon_variegatus
ENSACIG00000012161	-	72	36.510	ENSELUG00000004597	-	83	36.634	Esox_lucius
ENSACIG00000012161	-	64	35.677	ENSELUG00000004618	-	63	35.677	Esox_lucius
ENSACIG00000012161	-	90	34.657	ENSFHEG00000002853	-	91	34.657	Fundulus_heteroclitus
ENSACIG00000012161	-	90	34.402	ENSFHEG00000022106	-	96	34.496	Fundulus_heteroclitus
ENSACIG00000012161	-	93	32.607	ENSFHEG00000007211	-	99	33.143	Fundulus_heteroclitus
ENSACIG00000012161	-	93	32.609	ENSFHEG00000002865	-	91	32.823	Fundulus_heteroclitus
ENSACIG00000012161	-	54	40.278	ENSGMOG00000005227	-	99	40.278	Gadus_morhua
ENSACIG00000012161	-	90	32.327	ENSHCOG00000007389	-	94	32.327	Hippocampus_comes
ENSACIG00000012161	-	86	33.663	ENSHCOG00000000471	-	80	33.663	Hippocampus_comes
ENSACIG00000012161	-	83	32.716	ENSHCOG00000007436	-	86	32.716	Hippocampus_comes
ENSACIG00000012161	-	93	31.905	ENSHCOG00000007397	-	96	31.905	Hippocampus_comes
ENSACIG00000012161	-	61	43.182	ENSLBEG00000004576	-	82	43.182	Labrus_bergylta
ENSACIG00000012161	-	71	39.601	ENSLBEG00000003745	-	90	39.601	Labrus_bergylta
ENSACIG00000012161	-	61	42.009	ENSLBEG00000006732	-	81	41.818	Labrus_bergylta
ENSACIG00000012161	-	53	31.749	ENSLACG00000009240	-	97	31.818	Latimeria_chalumnae
ENSACIG00000012161	-	70	30.712	ENSLACG00000006357	-	99	30.712	Latimeria_chalumnae
ENSACIG00000012161	-	85	34.653	ENSLOCG00000011928	-	87	34.653	Lepisosteus_oculatus
ENSACIG00000012161	-	81	36.408	ENSLOCG00000017064	-	82	36.408	Lepisosteus_oculatus
ENSACIG00000012161	-	92	40.644	ENSMAMG00000019985	-	83	40.882	Mastacembelus_armatus
ENSACIG00000012161	-	99	41.778	ENSONIG00000020875	-	96	41.422	Oreochromis_niloticus
ENSACIG00000012161	-	90	33.932	ENSOMEG00000015368	-	99	34.216	Oryzias_melastigma
ENSACIG00000012161	-	72	37.198	ENSPMGG00000001593	-	84	37.198	Periophthalmus_magnuspinnatus
ENSACIG00000012161	-	83	36.078	ENSPMGG00000017392	-	99	36.078	Periophthalmus_magnuspinnatus
ENSACIG00000012161	-	92	37.261	ENSPLAG00000022994	-	98	37.261	Poecilia_latipinna
ENSACIG00000012161	-	71	39.800	ENSPLAG00000023379	-	96	39.800	Poecilia_latipinna
ENSACIG00000012161	-	89	35.474	ENSPLAG00000011817	-	99	35.410	Poecilia_latipinna
ENSACIG00000012161	-	92	36.973	ENSPLAG00000011810	-	97	36.973	Poecilia_latipinna
ENSACIG00000012161	-	93	36.381	ENSPMEG00000003431	-	99	36.571	Poecilia_mexicana
ENSACIG00000012161	-	93	35.804	ENSPMEG00000008574	-	98	35.804	Poecilia_mexicana
ENSACIG00000012161	-	93	35.620	ENSPREG00000012484	-	93	35.721	Poecilia_reticulata
ENSACIG00000012161	-	93	35.996	ENSPREG00000005756	-	96	35.996	Poecilia_reticulata
ENSACIG00000012161	-	93	36.544	ENSPREG00000005456	-	91	36.544	Poecilia_reticulata
ENSACIG00000012161	-	78	35.464	ENSPNAG00000021754	-	74	35.651	Pygocentrus_nattereri
ENSACIG00000012161	-	77	33.673	ENSPNAG00000017596	-	88	33.673	Pygocentrus_nattereri
ENSACIG00000012161	-	72	36.683	ENSPNAG00000003539	-	67	36.683	Pygocentrus_nattereri
ENSACIG00000012161	-	80	36.064	ENSPNAG00000007038	-	76	35.985	Pygocentrus_nattereri
ENSACIG00000012161	-	89	32.661	ENSPNAG00000016635	-	90	32.661	Pygocentrus_nattereri
ENSACIG00000012161	-	82	38.471	ENSXCOG00000013093	-	80	38.471	Xiphophorus_couchianus
ENSACIG00000012161	-	77	38.505	ENSXCOG00000008881	-	99	38.505	Xiphophorus_couchianus
ENSACIG00000012161	-	90	36.858	ENSXMAG00000028672	-	92	36.858	Xiphophorus_maculatus