EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000012170 (Gene tree)
Gene ID: -
Gene Symbol: ddx43
Alias: zgc:174910
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 17996 bases
Position: chrCCOE01000287.1:6418406-6436401
Accession: ZDB-GENE-080204-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000015835	KH_1	PF00013.29	2.3e-14	1	1
ENSACIP00000015805	KH_1	PF00013.29	2.4e-14	1	1
ENSACIP00000015745	DEAD	PF00270.29	3e-32	1	2
ENSACIP00000015745	DEAD	PF00270.29	3e-32	2	2
ENSACIP00000015816	DEAD	PF00270.29	3.8e-09	1	1
ENSACIP00000015805	DEAD	PF00270.29	3.9e-09	1	1
ENSACIP00000015835	DEAD	PF00270.29	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000016159	-	1824	-	ENSACIP00000015745	607 (aa)	-	-
ENSACIT00000016219	-	1050	-	ENSACIP00000015805	349 (aa)	-	-
ENSACIT00000016249	-	1020	-	ENSACIP00000015835	339 (aa)	-	-
ENSACIT00000016230	-	1029	-	ENSACIP00000015816	342 (aa)	-	-

Gene Model

Click here to download ENSACIG00000012170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000012170	ddx43	55	38.462	ENSACIG00000014378	ddx27	94	35.638
ENSACIG00000012170	ddx43	62	42.157	ENSACIG00000001068	-	83	39.225
ENSACIG00000012170	ddx43	61	45.153	ENSACIG00000022414	ddx5	80	45.153
ENSACIG00000012170	ddx43	56	30.424	ENSACIG00000006033	ddx31	66	30.673
ENSACIG00000012170	ddx43	61	41.837	ENSACIG00000006502	DDX5	62	41.837
ENSACIG00000012170	ddx43	59	32.124	ENSACIG00000002843	ddx52	69	32.124
ENSACIG00000012170	ddx43	65	36.854	ENSACIG00000008618	DDX41	65	37.755
ENSACIG00000012170	ddx43	51	36.364	ENSACIG00000017623	ddx4	85	36.364
ENSACIG00000012170	ddx43	55	30.663	ENSACIG00000016665	zgc:193690	68	30.110
ENSACIG00000012170	ddx43	57	30.055	ENSACIG00000011029	ddx49	76	30.055
ENSACIG00000012170	ddx43	64	36.627	ENSACIG00000007376	ddx42	50	37.565
ENSACIG00000012170	ddx43	54	32.394	ENSACIG00000006429	ddx21	51	31.034
ENSACIG00000012170	ddx43	59	31.649	ENSACIG00000009666	ddx59	65	31.649
ENSACIG00000012170	ddx43	68	38.085	ENSACIG00000013354	-	71	37.882
ENSACIG00000012170	ddx43	54	30.682	ENSACIG00000009719	eif4a3	85	30.682
ENSACIG00000012170	ddx43	66	38.215	ENSACIG00000023986	-	62	38.257
ENSACIG00000012170	ddx43	61	37.882	ENSACIG00000000022	ddx23	55	38.005
ENSACIG00000012170	ddx43	52	31.195	ENSACIG00000018534	ddx18	61	30.052
ENSACIG00000012170	ddx43	63	31.500	ENSACIG00000022802	ddx47	77	31.830

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000012170	ddx43	96	67.414	ENSAPOG00000001712	ddx43	94	67.515	Acanthochromis_polyacanthus
ENSACIG00000012170	ddx43	95	67.958	ENSAOCG00000001331	ddx43	93	67.958	Amphiprion_ocellaris
ENSACIG00000012170	ddx43	95	68.769	ENSAPEG00000001133	ddx43	92	67.417	Amphiprion_percula
ENSACIG00000012170	ddx43	95	69.301	ENSATEG00000012664	ddx43	96	69.301	Anabas_testudineus
ENSACIG00000012170	ddx43	78	62.348	ENSAPLG00000010182	-	96	65.733	Anas_platyrhynchos
ENSACIG00000012170	ddx43	76	64.536	ENSACAG00000004387	-	73	64.916	Anolis_carolinensis
ENSACIG00000012170	ddx43	93	73.121	ENSACLG00000026081	ddx43	97	68.006	Astatotilapia_calliptera
ENSACIG00000012170	ddx43	97	56.223	ENSAMXG00000004457	ddx43	95	57.204	Astyanax_mexicanus
ENSACIG00000012170	ddx43	61	47.264	WBGene00013214	Y54G11A.3	79	47.264	Caenorhabditis_elegans
ENSACIG00000012170	ddx43	92	60.748	ENSCSEG00000000532	ddx43	82	61.371	Cynoglossus_semilaevis
ENSACIG00000012170	ddx43	93	63.582	ENSCVAG00000009980	ddx43	93	53.477	Cyprinodon_variegatus
ENSACIG00000012170	ddx43	96	58.555	ENSDARG00000022614	ddx43	93	58.493	Danio_rerio
ENSACIG00000012170	ddx43	65	54.394	FBgn0037549	CG7878	60	54.394	Drosophila_melanogaster
ENSACIG00000012170	ddx43	78	42.020	ENSETEG00000014626	-	94	41.420	Echinops_telfairi
ENSACIG00000012170	ddx43	95	59.752	ENSELUG00000012126	ddx43	96	59.752	Esox_lucius
ENSACIG00000012170	ddx43	85	56.849	ENSFALG00000007042	-	98	53.917	Ficedula_albicollis
ENSACIG00000012170	ddx43	77	74.898	ENSFHEG00000011226	ddx43	89	74.898	Fundulus_heteroclitus
ENSACIG00000012170	ddx43	84	54.934	ENSFHEG00000008109	-	90	54.934	Fundulus_heteroclitus
ENSACIG00000012170	ddx43	72	72.149	ENSGMOG00000004178	ddx43	99	72.149	Gadus_morhua
ENSACIG00000012170	ddx43	66	68.660	ENSGALG00000015928	-	95	68.660	Gallus_gallus
ENSACIG00000012170	ddx43	95	61.144	ENSGAFG00000012622	ddx43	96	61.144	Gambusia_affinis
ENSACIG00000012170	ddx43	87	64.675	ENSGACG00000012072	ddx43	100	66.014	Gasterosteus_aculeatus
ENSACIG00000012170	ddx43	67	68.519	ENSGAGG00000025230	-	66	69.617	Gopherus_agassizii
ENSACIG00000012170	ddx43	93	73.121	ENSHBUG00000011653	ddx43	97	67.708	Haplochromis_burtoni
ENSACIG00000012170	ddx43	95	62.794	ENSHCOG00000014704	ddx43	96	62.539	Hippocampus_comes
ENSACIG00000012170	ddx43	98	58.285	ENSIPUG00000023423	ddx43	96	59.581	Ictalurus_punctatus
ENSACIG00000012170	ddx43	95	63.839	ENSKMAG00000016167	ddx43	96	63.839	Kryptolebias_marmoratus
ENSACIG00000012170	ddx43	95	63.772	ENSLBEG00000007913	ddx43	96	63.934	Labrus_bergylta
ENSACIG00000012170	ddx43	65	67.464	ENSLACG00000000741	ddx43	85	67.464	Latimeria_chalumnae
ENSACIG00000012170	ddx43	95	57.430	ENSLOCG00000016170	ddx43	96	57.430	Lepisosteus_oculatus
ENSACIG00000012170	ddx43	95	65.191	ENSMAMG00000022128	ddx43	95	65.191	Mastacembelus_armatus
ENSACIG00000012170	ddx43	93	73.121	ENSMZEG00005027349	ddx43	97	68.006	Maylandia_zebra
ENSACIG00000012170	ddx43	74	63.597	ENSMGAG00000013832	-	81	63.597	Meleagris_gallopavo
ENSACIG00000012170	ddx43	99	61.696	ENSMMOG00000007346	ddx43	95	63.902	Mola_mola
ENSACIG00000012170	ddx43	79	54.890	ENSMODG00000014335	-	85	54.890	Monodelphis_domestica
ENSACIG00000012170	ddx43	73	62.151	ENSMODG00000018546	-	72	62.151	Monodelphis_domestica
ENSACIG00000012170	ddx43	96	66.197	ENSMALG00000020673	ddx43	96	66.301	Monopterus_albus
ENSACIG00000012170	ddx43	93	75.074	ENSNBRG00000010942	ddx43	97	68.929	Neolamprologus_brichardi
ENSACIG00000012170	ddx43	93	73.620	ENSONIG00000001195	ddx43	99	68.182	Oreochromis_niloticus
ENSACIG00000012170	ddx43	65	51.542	ENSOANG00000006467	-	81	58.154	Ornithorhynchus_anatinus
ENSACIG00000012170	ddx43	95	65.378	ENSORLG00000002267	ddx43	83	71.614	Oryzias_latipes
ENSACIG00000012170	ddx43	95	65.378	ENSORLG00020018592	ddx43	96	65.378	Oryzias_latipes_hni
ENSACIG00000012170	ddx43	95	65.217	ENSORLG00015004854	ddx43	95	65.217	Oryzias_latipes_hsok
ENSACIG00000012170	ddx43	91	63.738	ENSOMEG00000023418	ddx43	96	63.738	Oryzias_melastigma
ENSACIG00000012170	ddx43	95	54.925	ENSPKIG00000002941	ddx43	95	54.776	Paramormyrops_kingsleyae
ENSACIG00000012170	ddx43	73	64.179	ENSPSIG00000002202	-	74	64.179	Pelodiscus_sinensis
ENSACIG00000012170	ddx43	92	60.000	ENSPMGG00000019854	ddx43	80	60.000	Periophthalmus_magnuspinnatus
ENSACIG00000012170	ddx43	73	54.409	ENSPCIG00000002492	-	74	54.409	Phascolarctos_cinereus
ENSACIG00000012170	ddx43	65	66.667	ENSPCIG00000017981	-	94	66.667	Phascolarctos_cinereus
ENSACIG00000012170	ddx43	95	61.504	ENSPFOG00000004241	ddx43	96	61.504	Poecilia_formosa
ENSACIG00000012170	ddx43	95	61.891	ENSPLAG00000023362	ddx43	96	61.891	Poecilia_latipinna
ENSACIG00000012170	ddx43	95	61.504	ENSPMEG00000004870	ddx43	96	61.504	Poecilia_mexicana
ENSACIG00000012170	ddx43	95	64.593	ENSPREG00000000923	ddx43	96	64.593	Poecilia_reticulata
ENSACIG00000012170	ddx43	93	69.527	ENSPNYG00000009064	ddx43	96	62.253	Pundamilia_nyererei
ENSACIG00000012170	ddx43	95	57.910	ENSPNAG00000001232	ddx43	93	57.910	Pygocentrus_nattereri
ENSACIG00000012170	ddx43	73	58.495	ENSSHAG00000016933	-	80	58.495	Sarcophilus_harrisii
ENSACIG00000012170	ddx43	73	62.151	ENSSHAG00000001847	-	72	62.151	Sarcophilus_harrisii
ENSACIG00000012170	ddx43	95	58.932	ENSSFOG00015012193	ddx43	90	58.932	Scleropages_formosus
ENSACIG00000012170	ddx43	95	63.571	ENSSMAG00000019288	ddx43	95	63.948	Scophthalmus_maximus
ENSACIG00000012170	ddx43	95	67.062	ENSSDUG00000020120	ddx43	95	67.061	Seriola_dumerili
ENSACIG00000012170	ddx43	96	67.964	ENSSLDG00000017225	ddx43	93	67.916	Seriola_lalandi_dorsalis
ENSACIG00000012170	ddx43	76	59.787	ENSSPUG00000018097	-	95	60.659	Sphenodon_punctatus
ENSACIG00000012170	ddx43	95	68.872	ENSSPAG00000006858	ddx43	95	69.683	Stegastes_partitus
ENSACIG00000012170	ddx43	73	64.301	ENSTGUG00000012684	-	78	64.301	Taeniopygia_guttata
ENSACIG00000012170	ddx43	76	67.010	ENSTRUG00000012795	ddx43	71	67.010	Takifugu_rubripes
ENSACIG00000012170	ddx43	78	70.909	ENSTNIG00000009822	ddx43	82	72.443	Tetraodon_nigroviridis
ENSACIG00000012170	ddx43	96	52.006	ENSXETG00000011767	ddx43	98	52.424	Xenopus_tropicalis
ENSACIG00000012170	ddx43	95	64.342	ENSXCOG00000013810	ddx43	96	64.342	Xiphophorus_couchianus
ENSACIG00000012170	ddx43	98	72.053	ENSXMAG00000017126	ddx43	87	73.161	Xiphophorus_maculatus