EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000012229 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 53148 bases
Position: chrCCOE01000385.1:2276248-2329395
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000015739	RRM_1	PF00076.22	5.1e-27	1	2
ENSACIP00000015739	RRM_1	PF00076.22	5.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000016153	-	888	-	ENSACIP00000015739	295 (aa)	-	-

Gene Model

Click here to download ENSACIG00000012229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000012229	-	89	58.052	ENSACIG00000008853	raver1	89	58.052

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000012229	-	93	91.209	ENSAOCG00000010129	-	95	91.209	Amphiprion_ocellaris
ENSACIG00000012229	-	93	91.209	ENSAPEG00000010843	-	95	91.209	Amphiprion_percula
ENSACIG00000012229	-	97	91.986	ENSATEG00000019679	raver2	99	91.986	Anabas_testudineus
ENSACIG00000012229	-	61	62.431	ENSCAPG00000013527	RAVER2	51	62.431	Cavia_aperea
ENSACIG00000012229	-	61	69.061	ENSCGRG00000011814	-	58	69.061	Cricetulus_griseus_crigri
ENSACIG00000012229	-	96	87.413	ENSCSEG00000017839	raver2	93	88.462	Cynoglossus_semilaevis
ENSACIG00000012229	-	78	94.348	ENSCVAG00000002687	raver2	54	94.444	Cyprinodon_variegatus
ENSACIG00000012229	-	94	76.512	ENSELUG00000022384	raver2	100	76.512	Esox_lucius
ENSACIG00000012229	-	61	67.403	ENSHGLG00100006640	RAVER2	52	67.403	Heterocephalus_glaber_male
ENSACIG00000012229	-	75	65.487	ENSSTOG00000009844	RAVER2	59	65.487	Ictidomys_tridecemlineatus
ENSACIG00000012229	-	77	95.175	ENSKMAG00000011656	raver2	74	95.175	Kryptolebias_marmoratus
ENSACIG00000012229	-	78	95.217	ENSLBEG00000003778	raver2	73	94.444	Labrus_bergylta
ENSACIG00000012229	-	79	94.828	ENSMAMG00000009059	raver2	52	94.828	Mastacembelus_armatus
ENSACIG00000012229	-	65	90.674	ENSMMOG00000006006	-	69	90.674	Mola_mola
ENSACIG00000012229	-	79	64.224	MGP_CAROLIEiJ_G0026202	Raver2	50	64.224	Mus_caroli
ENSACIG00000012229	-	79	64.224	ENSMUSG00000035275	Raver2	50	64.224	Mus_musculus
ENSACIG00000012229	-	79	64.224	MGP_PahariEiJ_G0028539	Raver2	50	64.224	Mus_pahari
ENSACIG00000012229	-	79	64.224	MGP_SPRETEiJ_G0027171	Raver2	50	64.224	Mus_spretus
ENSACIG00000012229	-	100	94.915	ENSNBRG00000014345	-	100	94.915	Neolamprologus_brichardi
ENSACIG00000012229	-	92	88.929	ENSORLG00015000191	raver2	67	89.643	Oryzias_latipes_hsok
ENSACIG00000012229	-	76	78.222	ENSPKIG00000013925	raver2	57	73.878	Paramormyrops_kingsleyae
ENSACIG00000012229	-	65	79.275	ENSPMGG00000017781	raver2	50	78.462	Periophthalmus_magnuspinnatus
ENSACIG00000012229	-	75	64.602	ENSPPYG00000001271	-	54	64.602	Pongo_abelii
ENSACIG00000012229	-	100	94.915	ENSPNYG00000013943	-	100	94.915	Pundamilia_nyererei
ENSACIG00000012229	-	97	75.347	ENSPNAG00000000962	raver2	90	75.347	Pygocentrus_nattereri
ENSACIG00000012229	-	79	75.214	ENSSFOG00015001335	raver2	52	75.214	Scleropages_formosus
ENSACIG00000012229	-	98	89.333	ENSSPAG00000004134	raver2	95	89.333	Stegastes_partitus
ENSACIG00000012229	-	94	92.857	ENSXCOG00000008271	-	89	93.214	Xiphophorus_couchianus