EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000012266 (Gene tree)
Gene ID: -
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 6006 bases
Position: chrCCOE01001335.1:1337665-1343670
Accession: ZDB-GENE-040426-779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000015842	FDF	PF09532.10	6.5e-08	1	1
ENSACIP00000015842	SM-ATX	PF14438.6	5.8e-08	1	1
ENSACIP00000015842	LSM14	PF12701.7	2.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000016256	-	1038	-	ENSACIP00000015842	345 (aa)	-	-

Gene Model

Click here to download ENSACIG00000012266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000012266	lsm14b	59	43.860	ENSACIG00000003147	LSM14B	87	42.342
ENSACIG00000012266	lsm14b	91	39.200	ENSACIG00000015925	lsm14aa	72	38.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000012266	lsm14b	91	51.781	ENSG00000149657	LSM14B	99	55.882	Homo_sapiens
ENSACIG00000012266	lsm14b	99	75.616	ENSAPOG00000001780	lsm14b	99	77.348	Acanthochromis_polyacanthus
ENSACIG00000012266	lsm14b	91	44.853	ENSAMEG00000013430	LSM14B	91	46.310	Ailuropoda_melanoleuca
ENSACIG00000012266	lsm14b	99	76.712	ENSAOCG00000012380	lsm14b	99	78.177	Amphiprion_ocellaris
ENSACIG00000012266	lsm14b	95	47.340	ENSAOCG00000006667	LSM14B	91	48.159	Amphiprion_ocellaris
ENSACIG00000012266	lsm14b	99	75.499	ENSAPEG00000023633	lsm14b	99	75.287	Amphiprion_percula
ENSACIG00000012266	lsm14b	99	74.457	ENSATEG00000016603	lsm14b	99	73.913	Anabas_testudineus
ENSACIG00000012266	lsm14b	63	42.960	ENSATEG00000015895	LSM14B	87	41.071	Anabas_testudineus
ENSACIG00000012266	lsm14b	81	42.857	ENSAPLG00000013203	LSM14B	89	43.258	Anas_platyrhynchos
ENSACIG00000012266	lsm14b	100	50.498	ENSACAG00000016195	LSM14B	90	52.661	Anolis_carolinensis
ENSACIG00000012266	lsm14b	91	51.781	ENSANAG00000037915	LSM14B	90	53.429	Aotus_nancymaae
ENSACIG00000012266	lsm14b	99	82.369	ENSACLG00000019663	lsm14b	99	82.369	Astatotilapia_calliptera
ENSACIG00000012266	lsm14b	90	56.983	ENSAMXG00000002865	lsm14b	91	57.382	Astyanax_mexicanus
ENSACIG00000012266	lsm14b	91	45.792	ENSBTAG00000021558	LSM14B	91	48.072	Bos_taurus
ENSACIG00000012266	lsm14b	91	51.499	ENSCJAG00000014434	LSM14B	90	52.557	Callithrix_jacchus
ENSACIG00000012266	lsm14b	81	41.734	ENSCAFG00000012518	LSM14B	89	44.350	Canis_familiaris
ENSACIG00000012266	lsm14b	91	50.681	ENSCAFG00020022150	LSM14B	90	53.409	Canis_lupus_dingo
ENSACIG00000012266	lsm14b	99	37.984	ENSCHIG00000022681	-	90	40.058	Capra_hircus
ENSACIG00000012266	lsm14b	91	50.954	ENSCHIG00000010284	-	90	52.841	Capra_hircus
ENSACIG00000012266	lsm14b	80	46.769	ENSTSYG00000031914	LSM14B	79	47.419	Carlito_syrichta
ENSACIG00000012266	lsm14b	80	48.160	ENSCAPG00000013059	LSM14B	89	48.882	Cavia_aperea
ENSACIG00000012266	lsm14b	80	48.308	ENSCPOG00000038080	LSM14B	89	49.038	Cavia_porcellus
ENSACIG00000012266	lsm14b	91	52.329	ENSCCAG00000021267	LSM14B	90	53.143	Cebus_capucinus
ENSACIG00000012266	lsm14b	92	37.288	ENSCCAG00000024900	-	75	37.255	Cebus_capucinus
ENSACIG00000012266	lsm14b	91	52.055	ENSCATG00000036006	LSM14B	90	52.542	Cercocebus_atys
ENSACIG00000012266	lsm14b	80	48.012	ENSCLAG00000003186	LSM14B	89	49.038	Chinchilla_lanigera
ENSACIG00000012266	lsm14b	91	47.407	ENSCSAG00000015729	LSM14B	91	47.815	Chlorocebus_sabaeus
ENSACIG00000012266	lsm14b	66	35.094	ENSCHOG00000006997	-	86	34.649	Choloepus_hoffmanni
ENSACIG00000012266	lsm14b	92	45.946	ENSCPBG00000027065	LSM14B	91	47.959	Chrysemys_picta_bellii
ENSACIG00000012266	lsm14b	80	48.318	ENSCANG00000036986	LSM14B	89	48.726	Colobus_angolensis_palliatus
ENSACIG00000012266	lsm14b	91	52.316	ENSCGRG00001018399	Lsm14b	90	53.409	Cricetulus_griseus_chok1gshd
ENSACIG00000012266	lsm14b	50	43.005	ENSCGRG00000002484	-	78	42.021	Cricetulus_griseus_crigri
ENSACIG00000012266	lsm14b	58	37.024	ENSCGRG00000006111	-	90	37.591	Cricetulus_griseus_crigri
ENSACIG00000012266	lsm14b	95	48.238	ENSCSEG00000020669	LSM14B	91	47.293	Cynoglossus_semilaevis
ENSACIG00000012266	lsm14b	99	70.620	ENSCSEG00000004722	lsm14b	99	70.350	Cynoglossus_semilaevis
ENSACIG00000012266	lsm14b	61	41.150	ENSCVAG00000012433	-	86	36.406	Cyprinodon_variegatus
ENSACIG00000012266	lsm14b	100	55.875	ENSDARG00000025386	lsm14b	91	55.367	Danio_rerio
ENSACIG00000012266	lsm14b	58	37.234	ENSDNOG00000025246	LSM14B	88	37.687	Dasypus_novemcinctus
ENSACIG00000012266	lsm14b	81	48.607	ENSDORG00000016683	Lsm14b	78	48.882	Dipodomys_ordii
ENSACIG00000012266	lsm14b	53	37.281	ENSETEG00000011188	-	99	38.889	Echinops_telfairi
ENSACIG00000012266	lsm14b	93	44.318	ENSETEG00000001869	-	89	43.491	Echinops_telfairi
ENSACIG00000012266	lsm14b	58	44.889	ENSEASG00005023218	LSM14B	85	43.182	Equus_asinus_asinus
ENSACIG00000012266	lsm14b	91	50.959	ENSECAG00000010659	LSM14B	90	52.857	Equus_caballus
ENSACIG00000012266	lsm14b	50	65.000	ENSEEUG00000007331	LSM14B	71	69.000	Erinaceus_europaeus
ENSACIG00000012266	lsm14b	100	59.794	ENSELUG00000005780	lsm14b	100	58.915	Esox_lucius
ENSACIG00000012266	lsm14b	90	51.453	ENSELUG00000016299	LSM14B	91	51.163	Esox_lucius
ENSACIG00000012266	lsm14b	91	50.685	ENSFCAG00000003248	LSM14B	90	52.571	Felis_catus
ENSACIG00000012266	lsm14b	81	43.514	ENSFALG00000010618	LSM14B	90	43.944	Ficedula_albicollis
ENSACIG00000012266	lsm14b	80	47.692	ENSFDAG00000002214	LSM14B	89	48.387	Fukomys_damarensis
ENSACIG00000012266	lsm14b	99	67.663	ENSFHEG00000006237	lsm14b	99	68.750	Fundulus_heteroclitus
ENSACIG00000012266	lsm14b	71	47.101	ENSFHEG00000003362	LSM14B	72	48.789	Fundulus_heteroclitus
ENSACIG00000012266	lsm14b	99	68.946	ENSGMOG00000017115	lsm14b	98	68.300	Gadus_morhua
ENSACIG00000012266	lsm14b	92	49.462	ENSGALG00000005125	LSM14B	90	52.825	Gallus_gallus
ENSACIG00000012266	lsm14b	67	41.803	ENSGAFG00000013723	LSM14B	85	41.827	Gambusia_affinis
ENSACIG00000012266	lsm14b	99	65.668	ENSGAFG00000020318	lsm14b	99	65.668	Gambusia_affinis
ENSACIG00000012266	lsm14b	99	71.003	ENSGACG00000009973	lsm14b	99	70.190	Gasterosteus_aculeatus
ENSACIG00000012266	lsm14b	52	42.308	ENSGAGG00000004106	LSM14B	76	41.584	Gopherus_agassizii
ENSACIG00000012266	lsm14b	81	47.720	ENSGGOG00000005630	LSM14B	84	48.726	Gorilla_gorilla
ENSACIG00000012266	lsm14b	91	52.260	ENSHGLG00000015055	LSM14B	90	52.557	Heterocephalus_glaber_female
ENSACIG00000012266	lsm14b	80	47.756	ENSHGLG00100015273	LSM14B	89	48.065	Heterocephalus_glaber_male
ENSACIG00000012266	lsm14b	67	62.393	ENSHCOG00000004867	lsm14b	100	61.111	Hippocampus_comes
ENSACIG00000012266	lsm14b	95	45.652	ENSHCOG00000018747	LSM14B	92	46.418	Hippocampus_comes
ENSACIG00000012266	lsm14b	90	59.207	ENSIPUG00000014946	lsm14b	86	58.640	Ictalurus_punctatus
ENSACIG00000012266	lsm14b	80	48.923	ENSSTOG00000020482	LSM14B	89	49.355	Ictidomys_tridecemlineatus
ENSACIG00000012266	lsm14b	91	52.066	ENSJJAG00000012728	Lsm14b	89	53.161	Jaculus_jaculus
ENSACIG00000012266	lsm14b	99	68.767	ENSKMAG00000017524	lsm14b	99	68.767	Kryptolebias_marmoratus
ENSACIG00000012266	lsm14b	63	41.379	ENSLBEG00000007951	LSM14B	85	42.857	Labrus_bergylta
ENSACIG00000012266	lsm14b	89	74.286	ENSLACG00000003849	LSM14B	91	49.872	Latimeria_chalumnae
ENSACIG00000012266	lsm14b	90	55.398	ENSLOCG00000003746	lsm14b	91	55.966	Lepisosteus_oculatus
ENSACIG00000012266	lsm14b	81	46.395	ENSLAFG00000007492	LSM14B	89	48.387	Loxodonta_africana
ENSACIG00000012266	lsm14b	91	51.781	ENSMFAG00000041479	LSM14B	90	52.857	Macaca_fascicularis
ENSACIG00000012266	lsm14b	91	51.781	ENSMMUG00000014084	LSM14B	90	52.857	Macaca_mulatta
ENSACIG00000012266	lsm14b	91	51.781	ENSMNEG00000045573	LSM14B	90	52.857	Macaca_nemestrina
ENSACIG00000012266	lsm14b	80	48.308	ENSMLEG00000040895	LSM14B	89	48.726	Mandrillus_leucophaeus
ENSACIG00000012266	lsm14b	97	50.134	ENSMAMG00000024124	LSM14B	91	49.709	Mastacembelus_armatus
ENSACIG00000012266	lsm14b	99	69.106	ENSMAMG00000020539	lsm14b	99	71.274	Mastacembelus_armatus
ENSACIG00000012266	lsm14b	99	82.597	ENSMZEG00005000987	lsm14b	99	82.597	Maylandia_zebra
ENSACIG00000012266	lsm14b	91	46.369	ENSMZEG00005026001	LSM14B	93	48.433	Maylandia_zebra
ENSACIG00000012266	lsm14b	81	45.181	ENSMGAG00000005300	LSM14B	88	48.726	Meleagris_gallopavo
ENSACIG00000012266	lsm14b	91	52.446	ENSMAUG00000020700	Lsm14b	90	52.975	Mesocricetus_auratus
ENSACIG00000012266	lsm14b	91	52.055	ENSMICG00000014675	LSM14B	90	53.468	Microcebus_murinus
ENSACIG00000012266	lsm14b	50	44.059	ENSMOCG00000005119	-	66	45.405	Microtus_ochrogaster
ENSACIG00000012266	lsm14b	91	52.329	ENSMOCG00000020600	Lsm14b	90	52.857	Microtus_ochrogaster
ENSACIG00000012266	lsm14b	92	68.571	ENSMMOG00000020042	lsm14b	95	67.714	Mola_mola
ENSACIG00000012266	lsm14b	92	53.709	ENSMMOG00000017321	LSM14B	90	53.153	Mola_mola
ENSACIG00000012266	lsm14b	58	38.298	ENSMODG00000016690	LSM14B	88	37.770	Monodelphis_domestica
ENSACIG00000012266	lsm14b	99	72.521	ENSMALG00000004783	lsm14b	99	73.371	Monopterus_albus
ENSACIG00000012266	lsm14b	92	45.404	ENSMALG00000022251	LSM14B	91	47.293	Monopterus_albus
ENSACIG00000012266	lsm14b	91	54.076	MGP_CAROLIEiJ_G0024770	Lsm14b	90	54.391	Mus_caroli
ENSACIG00000012266	lsm14b	91	54.076	ENSMUSG00000039108	Lsm14b	90	54.391	Mus_musculus
ENSACIG00000012266	lsm14b	91	53.804	MGP_PahariEiJ_G0026214	Lsm14b	90	54.391	Mus_pahari
ENSACIG00000012266	lsm14b	91	54.076	MGP_SPRETEiJ_G0025693	Lsm14b	90	54.391	Mus_spretus
ENSACIG00000012266	lsm14b	86	43.048	ENSMPUG00000007584	LSM14B	91	42.623	Mustela_putorius_furo
ENSACIG00000012266	lsm14b	90	51.381	ENSMLUG00000000304	LSM14B	90	52.557	Myotis_lucifugus
ENSACIG00000012266	lsm14b	57	39.431	ENSNGAG00000016550	Lsm14b	84	40.201	Nannospalax_galili
ENSACIG00000012266	lsm14b	80	48.012	ENSNLEG00000015757	LSM14B	89	48.397	Nomascus_leucogenys
ENSACIG00000012266	lsm14b	69	71.429	ENSMEUG00000008267	-	68	73.571	Notamacropus_eugenii
ENSACIG00000012266	lsm14b	91	52.044	ENSODEG00000004099	LSM14B	90	52.841	Octodon_degus
ENSACIG00000012266	lsm14b	99	82.271	ENSONIG00000020318	lsm14b	99	84.488	Oreochromis_niloticus
ENSACIG00000012266	lsm14b	76	55.556	ENSOANG00000003370	LSM14B	96	58.015	Ornithorhynchus_anatinus
ENSACIG00000012266	lsm14b	80	48.447	ENSOCUG00000006279	LSM14B	89	48.889	Oryctolagus_cuniculus
ENSACIG00000012266	lsm14b	93	46.499	ENSORLG00000028353	LSM14B	91	45.821	Oryzias_latipes
ENSACIG00000012266	lsm14b	99	73.204	ENSORLG00000013525	lsm14b	99	72.652	Oryzias_latipes
ENSACIG00000012266	lsm14b	60	36.975	ENSORLG00020018191	-	85	37.229	Oryzias_latipes_hni
ENSACIG00000012266	lsm14b	99	72.928	ENSORLG00020020553	lsm14b	99	72.376	Oryzias_latipes_hni
ENSACIG00000012266	lsm14b	93	46.499	ENSORLG00015013157	LSM14B	91	45.821	Oryzias_latipes_hsok
ENSACIG00000012266	lsm14b	99	72.928	ENSORLG00015016862	lsm14b	99	72.376	Oryzias_latipes_hsok
ENSACIG00000012266	lsm14b	62	40.889	ENSOMEG00000000171	-	83	39.320	Oryzias_melastigma
ENSACIG00000012266	lsm14b	99	73.259	ENSOMEG00000023917	lsm14b	99	73.259	Oryzias_melastigma
ENSACIG00000012266	lsm14b	91	48.477	ENSOGAG00000003915	LSM14B	91	47.044	Otolemur_garnettii
ENSACIG00000012266	lsm14b	80	43.014	ENSOARG00000014706	LSM14B	88	43.750	Ovis_aries
ENSACIG00000012266	lsm14b	81	47.720	ENSPPAG00000035799	LSM14B	84	48.726	Pan_paniscus
ENSACIG00000012266	lsm14b	91	50.685	ENSPPRG00000009197	LSM14B	90	52.571	Panthera_pardus
ENSACIG00000012266	lsm14b	58	44.444	ENSPTIG00000021518	LSM14B	88	42.857	Panthera_tigris_altaica
ENSACIG00000012266	lsm14b	91	51.781	ENSPTRG00000013696	LSM14B	90	52.857	Pan_troglodytes
ENSACIG00000012266	lsm14b	91	52.055	ENSPANG00000011747	LSM14B	90	52.542	Papio_anubis
ENSACIG00000012266	lsm14b	100	60.372	ENSPKIG00000003275	lsm14b	88	80.000	Paramormyrops_kingsleyae
ENSACIG00000012266	lsm14b	81	48.036	ENSPSIG00000014762	LSM14B	89	51.582	Pelodiscus_sinensis
ENSACIG00000012266	lsm14b	91	52.877	ENSPEMG00000017688	Lsm14b	90	53.143	Peromyscus_maniculatus_bairdii
ENSACIG00000012266	lsm14b	91	51.791	ENSPCIG00000013405	LSM14B	90	53.125	Phascolarctos_cinereus
ENSACIG00000012266	lsm14b	99	69.041	ENSPFOG00000005631	lsm14b	99	69.022	Poecilia_formosa
ENSACIG00000012266	lsm14b	90	47.674	ENSPLAG00000005793	LSM14B	90	48.824	Poecilia_latipinna
ENSACIG00000012266	lsm14b	99	68.493	ENSPLAG00000002449	lsm14b	99	68.478	Poecilia_latipinna
ENSACIG00000012266	lsm14b	99	69.315	ENSPMEG00000000745	lsm14b	99	69.315	Poecilia_mexicana
ENSACIG00000012266	lsm14b	90	48.060	ENSPMEG00000022953	LSM14B	90	49.853	Poecilia_mexicana
ENSACIG00000012266	lsm14b	59	41.453	ENSPREG00000007828	LSM14B	85	40.889	Poecilia_reticulata
ENSACIG00000012266	lsm14b	91	49.858	ENSPPYG00000011194	LSM14B	90	48.901	Pongo_abelii
ENSACIG00000012266	lsm14b	91	52.044	ENSPCOG00000013625	LSM14B	90	53.125	Propithecus_coquereli
ENSACIG00000012266	lsm14b	68	38.328	ENSPVAG00000017918	LSM14B	88	41.135	Pteropus_vampyrus
ENSACIG00000012266	lsm14b	90	60.725	ENSPNAG00000012777	lsm14b	90	60.725	Pygocentrus_nattereri
ENSACIG00000012266	lsm14b	91	48.284	ENSRNOG00000054557	Lsm14b	91	48.724	Rattus_norvegicus
ENSACIG00000012266	lsm14b	80	48.171	ENSRBIG00000033461	LSM14B	88	48.571	Rhinopithecus_bieti
ENSACIG00000012266	lsm14b	82	49.102	ENSRROG00000042949	LSM14B	81	49.533	Rhinopithecus_roxellana
ENSACIG00000012266	lsm14b	80	47.401	ENSSBOG00000032820	LSM14B	89	48.397	Saimiri_boliviensis_boliviensis
ENSACIG00000012266	lsm14b	81	48.148	ENSSHAG00000015528	LSM14B	86	50.000	Sarcophilus_harrisii
ENSACIG00000012266	lsm14b	90	60.058	ENSSFOG00015004627	lsm14b	91	59.184	Scleropages_formosus
ENSACIG00000012266	lsm14b	97	47.230	ENSSMAG00000000135	LSM14B	91	49.438	Scophthalmus_maximus
ENSACIG00000012266	lsm14b	99	75.202	ENSSMAG00000012725	lsm14b	99	75.202	Scophthalmus_maximus
ENSACIG00000012266	lsm14b	99	75.610	ENSSDUG00000020977	lsm14b	99	77.236	Seriola_dumerili
ENSACIG00000012266	lsm14b	92	49.438	ENSSDUG00000022770	LSM14B	91	49.857	Seriola_dumerili
ENSACIG00000012266	lsm14b	59	43.320	ENSSLDG00000011354	-	88	41.909	Seriola_lalandi_dorsalis
ENSACIG00000012266	lsm14b	92	47.160	ENSSPUG00000014360	LSM14B	96	49.855	Sphenodon_punctatus
ENSACIG00000012266	lsm14b	63	41.434	ENSSPAG00000018854	-	87	38.627	Stegastes_partitus
ENSACIG00000012266	lsm14b	99	82.370	ENSSPAG00000020915	lsm14b	99	82.370	Stegastes_partitus
ENSACIG00000012266	lsm14b	91	50.681	ENSSSCG00000026052	LSM14B	75	52.841	Sus_scrofa
ENSACIG00000012266	lsm14b	81	48.036	ENSTGUG00000007884	LSM14B	89	49.367	Taeniopygia_guttata
ENSACIG00000012266	lsm14b	99	70.718	ENSTRUG00000011354	lsm14b	99	69.613	Takifugu_rubripes
ENSACIG00000012266	lsm14b	95	46.923	ENSTRUG00000001529	LSM14B	91	50.000	Takifugu_rubripes
ENSACIG00000012266	lsm14b	99	67.380	ENSTNIG00000002445	lsm14b	99	65.508	Tetraodon_nigroviridis
ENSACIG00000012266	lsm14b	72	82.051	ENSTTRG00000011043	LSM14B	90	37.127	Tursiops_truncatus
ENSACIG00000012266	lsm14b	89	44.321	ENSUAMG00000025298	LSM14B	89	45.954	Ursus_americanus
ENSACIG00000012266	lsm14b	89	44.321	ENSUMAG00000000480	LSM14B	89	45.954	Ursus_maritimus
ENSACIG00000012266	lsm14b	81	46.667	ENSVVUG00000015920	LSM14B	88	48.589	Vulpes_vulpes
ENSACIG00000012266	lsm14b	85	52.663	ENSXETG00000001997	lsm14b	100	54.328	Xenopus_tropicalis
ENSACIG00000012266	lsm14b	99	69.231	ENSXMAG00000010013	lsm14b	99	69.231	Xiphophorus_maculatus