EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000012406 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5872 bases
Position: chrCCOE01000545.1:814598-820469
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000015997	MMR_HSR1	PF01926.23	5.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000016418	-	1884	-	ENSACIP00000015997	627 (aa)	-	-

Gene Model

Click here to download ENSACIG00000012406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000012406	lsg1	99	64.992	ENSG00000041802	LSG1	90	77.640	Homo_sapiens
ENSACIG00000012406	lsg1	100	81.417	ENSAPOG00000009694	lsg1	99	81.643	Acanthochromis_polyacanthus
ENSACIG00000012406	lsg1	100	63.485	ENSAMEG00000009343	LSG1	98	63.524	Ailuropoda_melanoleuca
ENSACIG00000012406	lsg1	100	81.102	ENSAOCG00000016066	lsg1	99	80.635	Amphiprion_ocellaris
ENSACIG00000012406	lsg1	100	80.975	ENSAPEG00000003252	lsg1	99	80.899	Amphiprion_percula
ENSACIG00000012406	lsg1	98	81.994	ENSATEG00000011794	lsg1	98	81.833	Anabas_testudineus
ENSACIG00000012406	lsg1	95	61.958	ENSACAG00000004222	LSG1	100	62.440	Anolis_carolinensis
ENSACIG00000012406	lsg1	99	64.947	ENSANAG00000021153	LSG1	98	65.062	Aotus_nancymaae
ENSACIG00000012406	lsg1	100	89.846	ENSACLG00000000520	lsg1	98	89.953	Astatotilapia_calliptera
ENSACIG00000012406	lsg1	100	73.570	ENSAMXG00000008271	lsg1	98	74.092	Astyanax_mexicanus
ENSACIG00000012406	lsg1	99	66.052	ENSBTAG00000008461	LSG1	98	65.517	Bos_taurus
ENSACIG00000012406	lsg1	84	33.583	WBGene00016907	C53H9.2	79	51.852	Caenorhabditis_elegans
ENSACIG00000012406	lsg1	99	64.795	ENSCJAG00000013962	LSG1	98	64.907	Callithrix_jacchus
ENSACIG00000012406	lsg1	95	65.016	ENSCAFG00000013445	LSG1	100	64.706	Canis_familiaris
ENSACIG00000012406	lsg1	100	64.091	ENSCAFG00020002216	LSG1	99	64.320	Canis_lupus_dingo
ENSACIG00000012406	lsg1	100	66.254	ENSCHIG00000015769	LSG1	98	66.038	Capra_hircus
ENSACIG00000012406	lsg1	99	63.939	ENSTSYG00000001447	LSG1	98	64.198	Carlito_syrichta
ENSACIG00000012406	lsg1	95	65.890	ENSCAPG00000009856	LSG1	99	65.950	Cavia_aperea
ENSACIG00000012406	lsg1	99	64.590	ENSCCAG00000035744	LSG1	98	64.697	Cebus_capucinus
ENSACIG00000012406	lsg1	99	65.250	ENSCATG00000042060	LSG1	98	63.043	Cercocebus_atys
ENSACIG00000012406	lsg1	99	65.099	ENSCSAG00000008796	LSG1	90	64.130	Chlorocebus_sabaeus
ENSACIG00000012406	lsg1	100	66.667	ENSCPBG00000015941	LSG1	82	65.850	Chrysemys_picta_bellii
ENSACIG00000012406	lsg1	84	39.444	ENSCING00000007079	-	97	47.961	Ciona_intestinalis
ENSACIG00000012406	lsg1	80	54.618	ENSCSAVG00000002514	-	92	57.674	Ciona_savignyi
ENSACIG00000012406	lsg1	99	64.795	ENSCANG00000030709	LSG1	98	63.975	Colobus_angolensis_palliatus
ENSACIG00000012406	lsg1	99	64.352	ENSCGRG00001019846	Lsg1	98	66.035	Cricetulus_griseus_chok1gshd
ENSACIG00000012406	lsg1	99	63.733	ENSCGRG00000014617	Lsg1	98	65.062	Cricetulus_griseus_crigri
ENSACIG00000012406	lsg1	98	79.712	ENSCSEG00000008522	lsg1	98	79.393	Cynoglossus_semilaevis
ENSACIG00000012406	lsg1	97	81.107	ENSCVAG00000002484	lsg1	98	80.713	Cyprinodon_variegatus
ENSACIG00000012406	lsg1	100	75.077	ENSDARG00000015352	lsg1	98	75.399	Danio_rerio
ENSACIG00000012406	lsg1	99	63.623	ENSDNOG00000006224	LSG1	98	63.400	Dasypus_novemcinctus
ENSACIG00000012406	lsg1	99	50.000	FBgn0266284	Ns3	98	49.123	Drosophila_melanogaster
ENSACIG00000012406	lsg1	88	76.000	ENSETEG00000003888	LSG1	87	79.032	Echinops_telfairi
ENSACIG00000012406	lsg1	88	58.031	ENSEBUG00000003119	lsg1	85	57.858	Eptatretus_burgeri
ENSACIG00000012406	lsg1	99	64.599	ENSEASG00005000678	LSG1	98	64.506	Equus_asinus_asinus
ENSACIG00000012406	lsg1	99	64.599	ENSECAG00000017659	LSG1	98	64.506	Equus_caballus
ENSACIG00000012406	lsg1	86	60.684	ENSEEUG00000015217	LSG1	85	60.684	Erinaceus_europaeus
ENSACIG00000012406	lsg1	100	73.832	ENSELUG00000023973	lsg1	98	73.291	Esox_lucius
ENSACIG00000012406	lsg1	100	63.079	ENSFCAG00000024957	LSG1	98	64.253	Felis_catus
ENSACIG00000012406	lsg1	92	61.889	ENSFALG00000007210	LSG1	94	61.874	Ficedula_albicollis
ENSACIG00000012406	lsg1	99	64.341	ENSFDAG00000017373	LSG1	98	64.873	Fukomys_damarensis
ENSACIG00000012406	lsg1	97	81.380	ENSFHEG00000003680	lsg1	98	81.470	Fundulus_heteroclitus
ENSACIG00000012406	lsg1	98	70.767	ENSGMOG00000015834	lsg1	98	70.447	Gadus_morhua
ENSACIG00000012406	lsg1	99	60.633	ENSGALG00000007058	LSG1	86	61.787	Gallus_gallus
ENSACIG00000012406	lsg1	97	81.270	ENSGAFG00000015831	lsg1	98	81.361	Gambusia_affinis
ENSACIG00000012406	lsg1	98	81.120	ENSGACG00000009323	lsg1	98	81.120	Gasterosteus_aculeatus
ENSACIG00000012406	lsg1	99	65.250	ENSGGOG00000000520	LSG1	98	65.373	Gorilla_gorilla
ENSACIG00000012406	lsg1	100	90.654	ENSHBUG00000005659	lsg1	98	90.779	Haplochromis_burtoni
ENSACIG00000012406	lsg1	99	64.050	ENSHGLG00000017390	LSG1	98	63.854	Heterocephalus_glaber_female
ENSACIG00000012406	lsg1	99	64.050	ENSHGLG00100018587	LSG1	98	63.854	Heterocephalus_glaber_male
ENSACIG00000012406	lsg1	97	78.469	ENSHCOG00000016848	lsg1	98	78.413	Hippocampus_comes
ENSACIG00000012406	lsg1	100	74.842	ENSIPUG00000008631	lsg1	98	74.920	Ictalurus_punctatus
ENSACIG00000012406	lsg1	75	58.052	ENSSTOG00000010234	LSG1	92	59.681	Ictidomys_tridecemlineatus
ENSACIG00000012406	lsg1	99	66.248	ENSJJAG00000015513	Lsg1	98	65.931	Jaculus_jaculus
ENSACIG00000012406	lsg1	98	79.450	ENSKMAG00000009681	lsg1	98	79.450	Kryptolebias_marmoratus
ENSACIG00000012406	lsg1	98	80.682	ENSLBEG00000024261	lsg1	98	81.169	Labrus_bergylta
ENSACIG00000012406	lsg1	100	65.817	ENSLACG00000013399	LSG1	98	66.208	Latimeria_chalumnae
ENSACIG00000012406	lsg1	98	71.518	ENSLOCG00000004918	lsg1	98	72.144	Lepisosteus_oculatus
ENSACIG00000012406	lsg1	99	66.047	ENSLAFG00000012919	-	98	65.827	Loxodonta_africana
ENSACIG00000012406	lsg1	99	65.099	ENSMFAG00000039903	LSG1	98	62.888	Macaca_fascicularis
ENSACIG00000012406	lsg1	99	65.099	ENSMMUG00000010708	LSG1	98	64.130	Macaca_mulatta
ENSACIG00000012406	lsg1	99	65.099	ENSMNEG00000031538	LSG1	98	63.199	Macaca_nemestrina
ENSACIG00000012406	lsg1	99	64.643	ENSMLEG00000041184	LSG1	98	64.130	Mandrillus_leucophaeus
ENSACIG00000012406	lsg1	100	81.833	ENSMAMG00000000470	lsg1	98	82.258	Mastacembelus_armatus
ENSACIG00000012406	lsg1	100	90.654	ENSMZEG00005017865	lsg1	98	90.779	Maylandia_zebra
ENSACIG00000012406	lsg1	88	62.139	ENSMGAG00000007050	LSG1	99	62.901	Meleagris_gallopavo
ENSACIG00000012406	lsg1	91	63.317	ENSMAUG00000016976	Lsg1	90	64.912	Mesocricetus_auratus
ENSACIG00000012406	lsg1	99	63.636	ENSMICG00000049087	LSG1	98	64.806	Microcebus_murinus
ENSACIG00000012406	lsg1	99	63.833	ENSMOCG00000022136	Lsg1	98	64.038	Microtus_ochrogaster
ENSACIG00000012406	lsg1	99	55.487	ENSMODG00000019828	LSG1	98	55.172	Monodelphis_domestica
ENSACIG00000012406	lsg1	100	64.571	MGP_CAROLIEiJ_G0020648	Lsg1	98	65.773	Mus_caroli
ENSACIG00000012406	lsg1	100	64.110	ENSMUSG00000022538	Lsg1	98	65.300	Mus_musculus
ENSACIG00000012406	lsg1	98	63.777	MGP_PahariEiJ_G0016352	Lsg1	98	63.889	Mus_pahari
ENSACIG00000012406	lsg1	100	64.417	MGP_SPRETEiJ_G0021544	Lsg1	98	65.300	Mus_spretus
ENSACIG00000012406	lsg1	100	64.188	ENSMPUG00000003734	LSG1	98	64.506	Mustela_putorius_furo
ENSACIG00000012406	lsg1	100	63.418	ENSMLUG00000012548	LSG1	98	64.407	Myotis_lucifugus
ENSACIG00000012406	lsg1	99	64.642	ENSNGAG00000021872	Lsg1	98	65.238	Nannospalax_galili
ENSACIG00000012406	lsg1	99	64.947	ENSNLEG00000008293	LSG1	98	64.286	Nomascus_leucogenys
ENSACIG00000012406	lsg1	69	69.072	ENSMEUG00000009041	-	84	69.072	Notamacropus_eugenii
ENSACIG00000012406	lsg1	100	89.660	ENSONIG00000002635	lsg1	98	90.551	Oreochromis_niloticus
ENSACIG00000012406	lsg1	95	68.344	ENSOANG00000012742	LSG1	99	67.370	Ornithorhynchus_anatinus
ENSACIG00000012406	lsg1	99	65.350	ENSOCUG00000004817	LSG1	98	64.806	Oryctolagus_cuniculus
ENSACIG00000012406	lsg1	98	79.187	ENSORLG00000007695	lsg1	98	79.512	Oryzias_latipes
ENSACIG00000012406	lsg1	98	79.512	ENSORLG00020016286	lsg1	98	79.837	Oryzias_latipes_hni
ENSACIG00000012406	lsg1	98	79.316	ENSORLG00015012025	lsg1	98	79.479	Oryzias_latipes_hsok
ENSACIG00000012406	lsg1	98	78.896	ENSOMEG00000022379	lsg1	98	79.545	Oryzias_melastigma
ENSACIG00000012406	lsg1	99	64.103	ENSOGAG00000003475	LSG1	98	64.363	Otolemur_garnettii
ENSACIG00000012406	lsg1	100	66.003	ENSOARG00000020403	LSG1	98	65.938	Ovis_aries
ENSACIG00000012406	lsg1	99	65.297	ENSPPAG00000029271	LSG1	98	65.528	Pan_paniscus
ENSACIG00000012406	lsg1	100	62.278	ENSPPRG00000010281	LSG1	98	63.553	Panthera_pardus
ENSACIG00000012406	lsg1	100	63.079	ENSPTIG00000010789	LSG1	98	64.396	Panthera_tigris_altaica
ENSACIG00000012406	lsg1	99	65.145	ENSPTRG00000015760	LSG1	98	65.373	Pan_troglodytes
ENSACIG00000012406	lsg1	99	64.947	ENSPANG00000018249	LSG1	98	62.733	Papio_anubis
ENSACIG00000012406	lsg1	99	71.719	ENSPKIG00000002895	lsg1	98	72.903	Paramormyrops_kingsleyae
ENSACIG00000012406	lsg1	96	62.736	ENSPSIG00000009821	LSG1	99	61.950	Pelodiscus_sinensis
ENSACIG00000012406	lsg1	95	77.537	ENSPMGG00000000931	lsg1	100	77.537	Periophthalmus_magnuspinnatus
ENSACIG00000012406	lsg1	99	63.485	ENSPEMG00000012082	-	98	63.580	Peromyscus_maniculatus_bairdii
ENSACIG00000012406	lsg1	99	60.902	ENSPMAG00000007451	lsg1	98	60.429	Petromyzon_marinus
ENSACIG00000012406	lsg1	98	67.742	ENSPCIG00000013890	LSG1	79	67.742	Phascolarctos_cinereus
ENSACIG00000012406	lsg1	97	80.707	ENSPFOG00000021882	lsg1	98	80.800	Poecilia_formosa
ENSACIG00000012406	lsg1	97	80.354	ENSPLAG00000019536	lsg1	98	80.128	Poecilia_latipinna
ENSACIG00000012406	lsg1	97	79.487	ENSPMEG00000017281	lsg1	98	79.585	Poecilia_mexicana
ENSACIG00000012406	lsg1	97	69.255	ENSPREG00000006048	lsg1	98	69.401	Poecilia_reticulata
ENSACIG00000012406	lsg1	92	63.967	ENSPPYG00000014425	LSG1	98	63.682	Pongo_abelii
ENSACIG00000012406	lsg1	89	73.333	ENSPCAG00000005511	LSG1	88	77.419	Procavia_capensis
ENSACIG00000012406	lsg1	99	65.356	ENSPCOG00000012360	LSG1	98	64.561	Propithecus_coquereli
ENSACIG00000012406	lsg1	100	89.846	ENSPNYG00000021994	lsg1	98	89.953	Pundamilia_nyererei
ENSACIG00000012406	lsg1	100	75.349	ENSPNAG00000015533	lsg1	98	75.079	Pygocentrus_nattereri
ENSACIG00000012406	lsg1	100	63.801	ENSRNOG00000001727	Lsg1	98	63.889	Rattus_norvegicus
ENSACIG00000012406	lsg1	99	64.590	ENSRBIG00000029053	LSG1	98	63.608	Rhinopithecus_bieti
ENSACIG00000012406	lsg1	99	64.590	ENSRROG00000037702	LSG1	98	63.608	Rhinopithecus_roxellana
ENSACIG00000012406	lsg1	82	42.026	YGL099W	LSG1	70	43.313	Saccharomyces_cerevisiae
ENSACIG00000012406	lsg1	99	64.947	ENSSBOG00000034938	LSG1	98	65.217	Saimiri_boliviensis_boliviensis
ENSACIG00000012406	lsg1	77	61.877	ENSSHAG00000003487	LSG1	100	61.877	Sarcophilus_harrisii
ENSACIG00000012406	lsg1	98	73.194	ENSSFOG00015008955	lsg1	98	73.194	Scleropages_formosus
ENSACIG00000012406	lsg1	98	84.603	ENSSDUG00000004622	lsg1	98	84.603	Seriola_dumerili
ENSACIG00000012406	lsg1	98	85.089	ENSSLDG00000010869	lsg1	98	85.089	Seriola_lalandi_dorsalis
ENSACIG00000012406	lsg1	84	66.568	ENSSARG00000012981	LSG1	82	64.146	Sorex_araneus
ENSACIG00000012406	lsg1	100	65.053	ENSSPUG00000016347	LSG1	98	64.915	Sphenodon_punctatus
ENSACIG00000012406	lsg1	100	81.429	ENSSPAG00000005508	lsg1	99	82.010	Stegastes_partitus
ENSACIG00000012406	lsg1	100	63.566	ENSSSCG00000011827	LSG1	98	64.082	Sus_scrofa
ENSACIG00000012406	lsg1	88	60.570	ENSTGUG00000009068	LSG1	100	60.826	Taeniopygia_guttata
ENSACIG00000012406	lsg1	97	77.120	ENSTRUG00000017380	lsg1	98	77.229	Takifugu_rubripes
ENSACIG00000012406	lsg1	97	80.906	ENSTNIG00000015570	lsg1	98	80.998	Tetraodon_nigroviridis
ENSACIG00000012406	lsg1	100	60.949	ENSTTRG00000000559	LSG1	98	60.938	Tursiops_truncatus
ENSACIG00000012406	lsg1	100	63.278	ENSUAMG00000012454	LSG1	98	63.932	Ursus_americanus
ENSACIG00000012406	lsg1	100	63.278	ENSUMAG00000000855	LSG1	98	63.932	Ursus_maritimus
ENSACIG00000012406	lsg1	95	61.600	ENSVPAG00000012400	LSG1	100	61.600	Vicugna_pacos
ENSACIG00000012406	lsg1	95	64.526	ENSVVUG00000008956	LSG1	98	63.495	Vulpes_vulpes
ENSACIG00000012406	lsg1	100	67.692	ENSXETG00000003451	lsg1	98	68.058	Xenopus_tropicalis
ENSACIG00000012406	lsg1	97	80.806	ENSXCOG00000003239	lsg1	98	80.899	Xiphophorus_couchianus
ENSACIG00000012406	lsg1	97	80.032	ENSXMAG00000005536	lsg1	98	80.129	Xiphophorus_maculatus