EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000012521 (Gene tree)
Gene ID: -
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: optic atrophy 1 (autosomal dominant)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 16497 bases
Position: chrCCOE01000545.1:878442-894938
Accession: ZDB-GENE-041114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000016164	MMR_HSR1	PF01926.23	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000016591	-	2811	-	ENSACIP00000016164	936 (aa)	-	-

Gene Model

Click here to download ENSACIG00000012521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012521's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000012521	opa1	97	96.982	ENSAPOG00000011980	opa1	98	94.680	Acanthochromis_polyacanthus
ENSACIG00000012521	opa1	97	96.845	ENSAOCG00000020559	opa1	99	94.902	Amphiprion_ocellaris
ENSACIG00000012521	opa1	98	92.733	ENSAPEG00000001641	opa1	99	92.733	Amphiprion_percula
ENSACIG00000012521	opa1	96	92.085	ENSAMXG00000012295	opa1	100	92.085	Astyanax_mexicanus
ENSACIG00000012521	opa1	95	49.419	WBGene00001134	eat-3	98	49.736	Caenorhabditis_elegans
ENSACIG00000012521	opa1	98	87.257	ENSCSEG00000014266	opa1	98	87.257	Cynoglossus_semilaevis
ENSACIG00000012521	opa1	97	96.296	ENSCVAG00000002438	opa1	97	92.888	Cyprinodon_variegatus
ENSACIG00000012521	opa1	97	88.723	ENSDARG00000070801	opa1	97	88.723	Danio_rerio
ENSACIG00000012521	opa1	92	55.109	FBgn0261276	Opa1	89	59.140	Drosophila_melanogaster
ENSACIG00000012521	opa1	97	90.387	ENSFHEG00000003616	opa1	98	89.651	Fundulus_heteroclitus
ENSACIG00000012521	opa1	97	91.578	ENSGACG00000009278	opa1	97	91.578	Gasterosteus_aculeatus
ENSACIG00000012521	opa1	96	93.851	ENSHBUG00000005897	opa1	98	93.851	Haplochromis_burtoni
ENSACIG00000012521	opa1	97	94.072	ENSHCOG00000016756	opa1	97	94.072	Hippocampus_comes
ENSACIG00000012521	opa1	80	94.236	ENSKMAG00000009415	opa1	95	94.236	Kryptolebias_marmoratus
ENSACIG00000012521	opa1	97	89.154	ENSMMOG00000008891	opa1	97	89.262	Mola_mola
ENSACIG00000012521	opa1	97	95.748	ENSMALG00000016968	opa1	97	89.215	Monopterus_albus
ENSACIG00000012521	opa1	98	96.634	ENSNBRG00000020394	opa1	99	96.634	Neolamprologus_brichardi
ENSACIG00000012521	opa1	97	91.221	ENSPKIG00000003379	opa1	89	91.221	Paramormyrops_kingsleyae
ENSACIG00000012521	opa1	97	75.866	ENSPKIG00000006473	OPA1	98	75.971	Paramormyrops_kingsleyae
ENSACIG00000012521	opa1	99	96.208	ENSPNYG00000021747	opa1	99	96.208	Pundamilia_nyererei
ENSACIG00000012521	opa1	97	91.658	ENSPNAG00000001917	opa1	98	91.548	Pygocentrus_nattereri
ENSACIG00000012521	opa1	92	93.213	ENSSFOG00015009303	OPA1	98	81.101	Scleropages_formosus
ENSACIG00000012521	opa1	95	93.672	ENSSMAG00000001797	opa1	96	93.672	Scophthalmus_maximus
ENSACIG00000012521	opa1	74	93.842	ENSSDUG00000004968	opa1	98	93.842	Seriola_dumerili
ENSACIG00000012521	opa1	97	96.708	ENSSLDG00000011089	opa1	89	96.708	Seriola_lalandi_dorsalis
ENSACIG00000012521	opa1	97	92.857	ENSSPAG00000018388	opa1	97	92.857	Stegastes_partitus
ENSACIG00000012521	opa1	78	91.455	ENSXCOG00000003267	opa1	93	91.455	Xiphophorus_couchianus
ENSACIG00000012521	opa1	78	95.473	ENSXMAG00000005593	opa1	97	95.473	Xiphophorus_maculatus