EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000012582 (Gene tree)
Gene ID: -
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 33871 bases
Position: chrCCOE01001108.1:3168898-3202768
Accession: ZDB-GENE-120314-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000016353	ResIII	PF04851.15	1.1e-08	1	1
ENSACIP00000016387	ResIII	PF04851.15	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000016821	-	5439	-	ENSACIP00000016387	1812 (aa)	-	-
ENSACIT00000016787	-	5544	-	ENSACIP00000016353	1848 (aa)	-	-

Gene Model

Click here to download ENSACIG00000012582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000012582	chd5	95	68.667	ENSACIG00000019310	chd4a	99	68.000
ENSACIG00000012582	chd5	95	67.038	ENSACIG00000012387	-	95	68.255
ENSACIG00000012582	chd5	84	87.879	ENSACIG00000019671	chd3	96	88.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000012582	chd5	98	79.197	ENSG00000116254	CHD5	95	81.818	Homo_sapiens
ENSACIG00000012582	chd5	98	76.981	ENSAMEG00000009880	CHD5	95	77.360	Ailuropoda_melanoleuca
ENSACIG00000012582	chd5	99	94.762	ENSAOCG00000020356	chd5	93	94.212	Amphiprion_ocellaris
ENSACIG00000012582	chd5	82	92.857	ENSAPLG00000015475	CHD5	95	74.932	Anas_platyrhynchos
ENSACIG00000012582	chd5	98	75.067	ENSACAG00000002441	CHD5	94	74.934	Anolis_carolinensis
ENSACIG00000012582	chd5	92	76.182	ENSANAG00000001078	CHD5	93	77.032	Aotus_nancymaae
ENSACIG00000012582	chd5	99	87.452	ENSACLG00000003012	chd5	99	87.480	Astatotilapia_calliptera
ENSACIG00000012582	chd5	89	89.583	ENSAMXG00000008921	chd5	96	89.583	Astyanax_mexicanus
ENSACIG00000012582	chd5	97	77.007	ENSBTAG00000040477	CHD5	99	78.289	Bos_taurus
ENSACIG00000012582	chd5	98	77.226	ENSCJAG00000000101	CHD5	94	77.996	Callithrix_jacchus
ENSACIG00000012582	chd5	97	77.736	ENSCAFG00000019545	CHD5	99	78.230	Canis_familiaris
ENSACIG00000012582	chd5	98	79.144	ENSCAFG00020008689	CHD5	91	79.022	Canis_lupus_dingo
ENSACIG00000012582	chd5	98	76.609	ENSCHIG00000015027	CHD5	92	77.571	Capra_hircus
ENSACIG00000012582	chd5	98	74.318	ENSTSYG00000033991	CHD5	94	76.451	Carlito_syrichta
ENSACIG00000012582	chd5	98	79.341	ENSCAPG00000009294	CHD5	95	79.108	Cavia_aperea
ENSACIG00000012582	chd5	98	79.341	ENSCPOG00000025080	CHD5	95	79.108	Cavia_porcellus
ENSACIG00000012582	chd5	98	77.658	ENSCCAG00000024756	CHD5	94	78.032	Cebus_capucinus
ENSACIG00000012582	chd5	98	77.376	ENSCATG00000043011	CHD5	95	77.992	Cercocebus_atys
ENSACIG00000012582	chd5	98	79.121	ENSCLAG00000010589	CHD5	95	79.042	Chinchilla_lanigera
ENSACIG00000012582	chd5	99	76.668	ENSCSAG00000000733	CHD5	94	77.885	Chlorocebus_sabaeus
ENSACIG00000012582	chd5	98	77.173	ENSCPBG00000019363	CHD5	99	77.862	Chrysemys_picta_bellii
ENSACIG00000012582	chd5	99	76.752	ENSCANG00000032302	CHD5	94	78.171	Colobus_angolensis_palliatus
ENSACIG00000012582	chd5	57	79.151	ENSCGRG00001011042	Chd5	96	81.863	Cricetulus_griseus_chok1gshd
ENSACIG00000012582	chd5	98	78.681	ENSCGRG00000011341	Chd5	97	77.641	Cricetulus_griseus_crigri
ENSACIG00000012582	chd5	95	67.812	ENSDARG00000025789	chd4b	93	67.553	Danio_rerio
ENSACIG00000012582	chd5	99	85.792	ENSDARG00000105083	chd5	99	86.594	Danio_rerio
ENSACIG00000012582	chd5	95	79.014	ENSDNOG00000046342	CHD5	89	80.338	Dasypus_novemcinctus
ENSACIG00000012582	chd5	98	78.760	ENSDORG00000005923	Chd5	95	78.836	Dipodomys_ordii
ENSACIG00000012582	chd5	87	89.908	ENSEASG00005021464	CHD5	91	87.264	Equus_asinus_asinus
ENSACIG00000012582	chd5	87	89.908	ENSECAG00000025043	CHD5	95	85.772	Equus_caballus
ENSACIG00000012582	chd5	69	86.385	ENSEEUG00000002772	CHD5	71	84.793	Erinaceus_europaeus
ENSACIG00000012582	chd5	99	83.224	ENSELUG00000010742	chd5	93	90.196	Esox_lucius
ENSACIG00000012582	chd5	98	77.898	ENSFCAG00000006319	CHD5	94	78.415	Felis_catus
ENSACIG00000012582	chd5	98	77.055	ENSFALG00000009740	CHD5	94	76.931	Ficedula_albicollis
ENSACIG00000012582	chd5	98	78.591	ENSFDAG00000012881	CHD5	93	77.796	Fukomys_damarensis
ENSACIG00000012582	chd5	98	77.532	ENSGALG00000000747	CHD5	94	77.801	Gallus_gallus
ENSACIG00000012582	chd5	58	93.062	ENSGACG00000004389	chd5	97	90.434	Gasterosteus_aculeatus
ENSACIG00000012582	chd5	88	90.610	ENSGAGG00000001590	CHD5	97	90.547	Gopherus_agassizii
ENSACIG00000012582	chd5	98	79.197	ENSGGOG00000000708	CHD5	95	78.147	Gorilla_gorilla
ENSACIG00000012582	chd5	99	88.570	ENSHBUG00000013453	chd5	99	88.595	Haplochromis_burtoni
ENSACIG00000012582	chd5	98	80.944	ENSHGLG00000018184	CHD5	97	77.802	Heterocephalus_glaber_female
ENSACIG00000012582	chd5	98	72.453	ENSHGLG00100013261	CHD5	92	72.633	Heterocephalus_glaber_male
ENSACIG00000012582	chd5	99	84.665	ENSIPUG00000005446	chd5	100	85.097	Ictalurus_punctatus
ENSACIG00000012582	chd5	98	78.650	ENSSTOG00000002778	CHD5	95	78.793	Ictidomys_tridecemlineatus
ENSACIG00000012582	chd5	98	79.089	ENSJJAG00000019072	Chd5	94	78.956	Jaculus_jaculus
ENSACIG00000012582	chd5	99	84.494	ENSLOCG00000004944	chd5	94	91.667	Lepisosteus_oculatus
ENSACIG00000012582	chd5	99	77.518	ENSLAFG00000006348	CHD5	100	77.268	Loxodonta_africana
ENSACIG00000012582	chd5	99	76.614	ENSMFAG00000033993	CHD5	99	78.084	Macaca_fascicularis
ENSACIG00000012582	chd5	99	77.205	ENSMMUG00000016838	CHD5	94	79.074	Macaca_mulatta
ENSACIG00000012582	chd5	99	76.668	ENSMNEG00000040044	CHD5	94	77.831	Macaca_nemestrina
ENSACIG00000012582	chd5	99	73.862	ENSMLEG00000039166	CHD5	95	74.816	Mandrillus_leucophaeus
ENSACIG00000012582	chd5	99	85.249	ENSMZEG00005000841	chd5	93	92.616	Maylandia_zebra
ENSACIG00000012582	chd5	98	79.412	ENSMGAG00000001055	CHD5	94	77.689	Meleagris_gallopavo
ENSACIG00000012582	chd5	97	78.877	ENSMICG00000017862	CHD5	92	81.862	Microcebus_murinus
ENSACIG00000012582	chd5	98	79.011	ENSMOCG00000011049	Chd5	96	77.309	Microtus_ochrogaster
ENSACIG00000012582	chd5	66	86.957	ENSMODG00000006294	CHD5	73	81.134	Monodelphis_domestica
ENSACIG00000012582	chd5	99	93.923	ENSMALG00000002831	chd5	99	92.295	Monopterus_albus
ENSACIG00000012582	chd5	99	76.976	MGP_CAROLIEiJ_G0026857	Chd5	96	77.653	Mus_caroli
ENSACIG00000012582	chd5	98	78.999	ENSMUSG00000005045	Chd5	94	78.887	Mus_musculus
ENSACIG00000012582	chd5	98	78.901	MGP_PahariEiJ_G0029205	Chd5	94	78.661	Mus_pahari
ENSACIG00000012582	chd5	98	79.054	MGP_SPRETEiJ_G0027850	Chd5	94	78.942	Mus_spretus
ENSACIG00000012582	chd5	98	76.793	ENSMPUG00000007122	CHD5	95	76.529	Mustela_putorius_furo
ENSACIG00000012582	chd5	98	77.251	ENSNGAG00000019812	Chd5	92	77.295	Nannospalax_galili
ENSACIG00000012582	chd5	98	77.651	ENSNLEG00000010320	CHD5	95	75.967	Nomascus_leucogenys
ENSACIG00000012582	chd5	85	75.035	ENSOPRG00000004304	CHD5	79	76.923	Ochotona_princeps
ENSACIG00000012582	chd5	98	79.109	ENSODEG00000010262	CHD5	95	78.867	Octodon_degus
ENSACIG00000012582	chd5	99	93.479	ENSONIG00000000619	chd5	95	92.714	Oreochromis_niloticus
ENSACIG00000012582	chd5	95	76.068	ENSOANG00000001819	CHD5	93	76.068	Ornithorhynchus_anatinus
ENSACIG00000012582	chd5	98	77.677	ENSOGAG00000005703	CHD5	94	78.051	Otolemur_garnettii
ENSACIG00000012582	chd5	95	76.338	ENSOARG00000013425	CHD5	93	77.315	Ovis_aries
ENSACIG00000012582	chd5	98	79.375	ENSPPAG00000034048	CHD5	95	78.214	Pan_paniscus
ENSACIG00000012582	chd5	98	77.383	ENSPPRG00000009453	CHD5	94	77.161	Panthera_pardus
ENSACIG00000012582	chd5	98	72.104	ENSPTIG00000013926	CHD5	95	73.424	Panthera_tigris_altaica
ENSACIG00000012582	chd5	98	79.089	ENSPTRG00000000075	CHD5	94	78.214	Pan_troglodytes
ENSACIG00000012582	chd5	99	76.668	ENSPANG00000006765	CHD5	94	77.831	Papio_anubis
ENSACIG00000012582	chd5	94	85.997	ENSPKIG00000004282	chd5	95	85.997	Paramormyrops_kingsleyae
ENSACIG00000012582	chd5	98	72.386	ENSPSIG00000006414	CHD5	98	72.175	Pelodiscus_sinensis
ENSACIG00000012582	chd5	64	83.000	ENSPEMG00000014799	Chd5	93	82.688	Peromyscus_maniculatus_bairdii
ENSACIG00000012582	chd5	99	78.947	ENSPCIG00000028310	CHD5	92	79.203	Phascolarctos_cinereus
ENSACIG00000012582	chd5	93	96.000	ENSPLAG00000005343	chd5	99	89.125	Poecilia_latipinna
ENSACIG00000012582	chd5	89	85.771	ENSPPYG00000001952	CHD5	95	82.175	Pongo_abelii
ENSACIG00000012582	chd5	98	77.921	ENSPCOG00000022930	CHD5	94	78.420	Propithecus_coquereli
ENSACIG00000012582	chd5	100	95.405	ENSPNYG00000003183	chd5	100	95.405	Pundamilia_nyererei
ENSACIG00000012582	chd5	99	76.939	ENSRNOG00000011268	Chd5	96	77.671	Rattus_norvegicus
ENSACIG00000012582	chd5	91	87.550	ENSRBIG00000032140	CHD5	95	81.617	Rhinopithecus_bieti
ENSACIG00000012582	chd5	99	76.772	ENSRROG00000041146	CHD5	94	78.062	Rhinopithecus_roxellana
ENSACIG00000012582	chd5	98	74.608	ENSSBOG00000001955	CHD5	99	80.132	Saimiri_boliviensis_boliviensis
ENSACIG00000012582	chd5	98	72.419	ENSSHAG00000018641	CHD5	97	72.520	Sarcophilus_harrisii
ENSACIG00000012582	chd5	99	85.722	ENSSFOG00015006296	chd5	91	88.112	Scleropages_formosus
ENSACIG00000012582	chd5	99	93.384	ENSSDUG00000017526	chd5	99	93.384	Seriola_dumerili
ENSACIG00000012582	chd5	99	72.243	ENSSPUG00000010622	CHD5	89	87.179	Sphenodon_punctatus
ENSACIG00000012582	chd5	97	77.814	ENSSSCG00000003366	CHD5	99	78.560	Sus_scrofa
ENSACIG00000012582	chd5	95	75.000	ENSTGUG00000002634	-	98	75.564	Taeniopygia_guttata
ENSACIG00000012582	chd5	55	90.640	ENSTNIG00000004346	chd5	100	90.542	Tetraodon_nigroviridis
ENSACIG00000012582	chd5	98	78.349	ENSTTRG00000010468	CHD5	94	78.277	Tursiops_truncatus
ENSACIG00000012582	chd5	98	78.685	ENSUAMG00000024509	CHD5	92	88.889	Ursus_americanus
ENSACIG00000012582	chd5	98	74.601	ENSUMAG00000024173	CHD5	96	74.986	Ursus_maritimus
ENSACIG00000012582	chd5	85	92.000	ENSVVUG00000026480	CHD5	89	92.000	Vulpes_vulpes
ENSACIG00000012582	chd5	98	74.810	ENSXETG00000002904	chd5	97	73.961	Xenopus_tropicalis
ENSACIG00000012582	chd5	60	93.278	ENSXCOG00000014202	chd5	98	93.284	Xiphophorus_couchianus