EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000012852 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 16890 bases
Position: chrCCOE01000489.1:1668622-1685511
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000016510	RRM_1	PF00076.22	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000016954	-	1437	-	ENSACIP00000016510	478 (aa)	-	-

Gene Model

Click here to download ENSACIG00000012852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000012852	cstf2	96	58.160	ENSG00000101811	CSTF2	81	92.350	Homo_sapiens
ENSACIG00000012852	cstf2	96	84.937	ENSAPOG00000005630	cstf2	96	85.744	Acanthochromis_polyacanthus
ENSACIG00000012852	cstf2	96	55.075	ENSAMEG00000002082	CSTF2	84	82.645	Ailuropoda_melanoleuca
ENSACIG00000012852	cstf2	100	84.476	ENSAOCG00000020905	cstf2	96	85.535	Amphiprion_ocellaris
ENSACIG00000012852	cstf2	100	84.476	ENSAPEG00000006526	cstf2	96	85.535	Amphiprion_percula
ENSACIG00000012852	cstf2	100	83.600	ENSATEG00000018186	cstf2	96	82.536	Anabas_testudineus
ENSACIG00000012852	cstf2	93	56.537	ENSAPLG00000007255	CSTF2	84	81.933	Anas_platyrhynchos
ENSACIG00000012852	cstf2	97	74.216	ENSANAG00000022342	CSTF2	87	82.231	Aotus_nancymaae
ENSACIG00000012852	cstf2	100	89.879	ENSACLG00000000779	cstf2	93	89.263	Astatotilapia_calliptera
ENSACIG00000012852	cstf2	87	88.210	ENSAMXG00000021477	cstf2	74	100.000	Astyanax_mexicanus
ENSACIG00000012852	cstf2	96	58.478	ENSBTAG00000003547	CSTF2	84	82.645	Bos_taurus
ENSACIG00000012852	cstf2	96	60.442	ENSCJAG00000004422	CSTF2	87	82.231	Callithrix_jacchus
ENSACIG00000012852	cstf2	96	57.812	ENSCAFG00000017551	CSTF2	99	56.110	Canis_familiaris
ENSACIG00000012852	cstf2	96	74.823	ENSCAFG00020007619	CSTF2	80	83.058	Canis_lupus_dingo
ENSACIG00000012852	cstf2	96	58.651	ENSCHIG00000016994	CSTF2	84	82.645	Capra_hircus
ENSACIG00000012852	cstf2	96	58.160	ENSTSYG00000006529	CSTF2	87	82.231	Carlito_syrichta
ENSACIG00000012852	cstf2	97	57.751	ENSCPOG00000015255	CSTF2	84	92.810	Cavia_porcellus
ENSACIG00000012852	cstf2	96	59.605	ENSCCAG00000032975	CSTF2	87	82.231	Cebus_capucinus
ENSACIG00000012852	cstf2	96	60.394	ENSCATG00000022835	CSTF2	87	82.231	Cercocebus_atys
ENSACIG00000012852	cstf2	96	58.419	ENSCLAG00000001904	CSTF2	85	91.026	Chinchilla_lanigera
ENSACIG00000012852	cstf2	97	55.740	ENSCSAG00000010360	CSTF2	84	82.231	Chlorocebus_sabaeus
ENSACIG00000012852	cstf2	67	94.969	ENSCHOG00000012803	CSTF2	75	94.969	Choloepus_hoffmanni
ENSACIG00000012852	cstf2	97	67.689	ENSCPBG00000014293	CSTF2	65	84.898	Chrysemys_picta_bellii
ENSACIG00000012852	cstf2	96	59.785	ENSCANG00000030612	CSTF2	87	82.231	Colobus_angolensis_palliatus
ENSACIG00000012852	cstf2	96	57.093	ENSCGRG00001023023	Cstf2	87	83.333	Cricetulus_griseus_chok1gshd
ENSACIG00000012852	cstf2	96	59.358	ENSCGRG00000003897	Cstf2	87	82.917	Cricetulus_griseus_crigri
ENSACIG00000012852	cstf2	96	84.696	ENSCVAG00000005731	cstf2	96	82.600	Cyprinodon_variegatus
ENSACIG00000012852	cstf2	76	100.000	ENSDARG00000090788	cstf2	71	100.000	Danio_rerio
ENSACIG00000012852	cstf2	96	58.304	ENSDORG00000007195	Cstf2	87	90.566	Dipodomys_ordii
ENSACIG00000012852	cstf2	97	57.315	ENSECAG00000009325	CSTF2	99	56.110	Equus_caballus
ENSACIG00000012852	cstf2	96	57.986	ENSFCAG00000007000	CSTF2	84	82.645	Felis_catus
ENSACIG00000012852	cstf2	88	54.306	ENSFALG00000003859	CSTF2	86	81.429	Ficedula_albicollis
ENSACIG00000012852	cstf2	97	74.648	ENSFDAG00000002416	CSTF2	87	82.645	Fukomys_damarensis
ENSACIG00000012852	cstf2	96	81.529	ENSFHEG00000017065	cstf2	92	83.015	Fundulus_heteroclitus
ENSACIG00000012852	cstf2	95	77.874	ENSGMOG00000005145	cstf2	99	79.870	Gadus_morhua
ENSACIG00000012852	cstf2	97	59.622	ENSGALG00000006760	CSTF2	89	83.806	Gallus_gallus
ENSACIG00000012852	cstf2	96	82.062	ENSGAFG00000020027	cstf2	96	81.031	Gambusia_affinis
ENSACIG00000012852	cstf2	97	77.062	ENSGACG00000017326	cstf2	98	71.983	Gasterosteus_aculeatus
ENSACIG00000012852	cstf2	97	55.935	ENSGAGG00000006037	CSTF2	89	83.534	Gopherus_agassizii
ENSACIG00000012852	cstf2	96	59.964	ENSGGOG00000022267	CSTF2	87	82.231	Gorilla_gorilla
ENSACIG00000012852	cstf2	100	89.157	ENSHBUG00000016183	cstf2	93	88.518	Haplochromis_burtoni
ENSACIG00000012852	cstf2	96	57.831	ENSHGLG00000000659	-	86	89.506	Heterocephalus_glaber_female
ENSACIG00000012852	cstf2	96	57.831	ENSHGLG00100001130	-	86	89.506	Heterocephalus_glaber_male
ENSACIG00000012852	cstf2	96	82.328	ENSHCOG00000005157	cstf2	97	81.667	Hippocampus_comes
ENSACIG00000012852	cstf2	100	70.510	ENSIPUG00000017839	cstf2	97	65.278	Ictalurus_punctatus
ENSACIG00000012852	cstf2	97	57.812	ENSSTOG00000023445	CSTF2	85	91.026	Ictidomys_tridecemlineatus
ENSACIG00000012852	cstf2	96	57.659	ENSJJAG00000020507	Cstf2	85	91.026	Jaculus_jaculus
ENSACIG00000012852	cstf2	100	82.530	ENSKMAG00000001068	cstf2	96	84.551	Kryptolebias_marmoratus
ENSACIG00000012852	cstf2	67	92.405	ENSLBEG00000028720	cstf2	93	96.610	Labrus_bergylta
ENSACIG00000012852	cstf2	99	90.385	ENSLOCG00000015300	cstf2	79	90.385	Lepisosteus_oculatus
ENSACIG00000012852	cstf2	96	59.785	ENSMFAG00000043888	CSTF2	87	82.231	Macaca_fascicularis
ENSACIG00000012852	cstf2	96	59.785	ENSMMUG00000013008	CSTF2	86	80.258	Macaca_mulatta
ENSACIG00000012852	cstf2	96	59.785	ENSMNEG00000041824	CSTF2	87	82.231	Macaca_nemestrina
ENSACIG00000012852	cstf2	96	59.785	ENSMLEG00000036870	CSTF2	87	82.231	Mandrillus_leucophaeus
ENSACIG00000012852	cstf2	94	85.408	ENSMAMG00000020364	cstf2	96	86.052	Mastacembelus_armatus
ENSACIG00000012852	cstf2	100	89.879	ENSMZEG00005007200	cstf2	96	89.263	Maylandia_zebra
ENSACIG00000012852	cstf2	82	84.615	ENSMGAG00000004139	CSTF2	100	55.675	Meleagris_gallopavo
ENSACIG00000012852	cstf2	96	56.131	ENSMAUG00000000965	Cstf2	87	83.333	Mesocricetus_auratus
ENSACIG00000012852	cstf2	97	75.000	ENSMICG00000014121	CSTF2	87	82.645	Microcebus_murinus
ENSACIG00000012852	cstf2	96	57.366	ENSMOCG00000008081	Cstf2	87	82.917	Microtus_ochrogaster
ENSACIG00000012852	cstf2	100	78.794	ENSMMOG00000000538	cstf2	96	80.392	Mola_mola
ENSACIG00000012852	cstf2	97	57.833	ENSMODG00000011785	CSTF2	86	85.124	Monodelphis_domestica
ENSACIG00000012852	cstf2	96	76.259	MGP_CAROLIEiJ_G0033383	Cstf2	84	92.258	Mus_caroli
ENSACIG00000012852	cstf2	96	58.228	ENSMUSG00000031256	Cstf2	84	92.258	Mus_musculus
ENSACIG00000012852	cstf2	96	76.259	MGP_PahariEiJ_G0031923	Cstf2	87	83.884	Mus_pahari
ENSACIG00000012852	cstf2	96	76.259	MGP_SPRETEiJ_G0034548	Cstf2	84	92.258	Mus_spretus
ENSACIG00000012852	cstf2	96	74.823	ENSMPUG00000002339	CSTF2	80	83.058	Mustela_putorius_furo
ENSACIG00000012852	cstf2	91	79.457	ENSMLUG00000004598	CSTF2	78	82.377	Myotis_lucifugus
ENSACIG00000012852	cstf2	96	58.333	ENSNGAG00000021985	Cstf2	87	83.058	Nannospalax_galili
ENSACIG00000012852	cstf2	92	85.651	ENSNBRG00000021694	cstf2	100	86.093	Neolamprologus_brichardi
ENSACIG00000012852	cstf2	96	59.785	ENSNLEG00000007510	CSTF2	87	82.231	Nomascus_leucogenys
ENSACIG00000012852	cstf2	97	61.307	ENSMEUG00000011186	-	99	55.556	Notamacropus_eugenii
ENSACIG00000012852	cstf2	87	59.295	ENSMEUG00000014025	-	50	49.807	Notamacropus_eugenii
ENSACIG00000012852	cstf2	81	76.923	ENSOPRG00000003106	CSTF2	82	71.689	Ochotona_princeps
ENSACIG00000012852	cstf2	96	58.076	ENSODEG00000002059	CSTF2	87	82.645	Octodon_degus
ENSACIG00000012852	cstf2	91	95.730	ENSONIG00000002631	cstf2	71	95.730	Oreochromis_niloticus
ENSACIG00000012852	cstf2	96	58.087	ENSOCUG00000010468	CSTF2	99	57.639	Oryctolagus_cuniculus
ENSACIG00000012852	cstf2	96	83.542	ENSORLG00000001380	cstf2	96	83.264	Oryzias_latipes
ENSACIG00000012852	cstf2	96	83.542	ENSORLG00020021917	cstf2	96	83.264	Oryzias_latipes_hni
ENSACIG00000012852	cstf2	96	83.542	ENSORLG00015011996	cstf2	96	83.264	Oryzias_latipes_hsok
ENSACIG00000012852	cstf2	100	85.111	ENSOMEG00000015507	cstf2	96	85.774	Oryzias_melastigma
ENSACIG00000012852	cstf2	96	76.157	ENSOGAG00000011192	CSTF2	80	82.500	Otolemur_garnettii
ENSACIG00000012852	cstf2	96	58.651	ENSOARG00000001022	CSTF2	84	82.645	Ovis_aries
ENSACIG00000012852	cstf2	96	59.964	ENSPPAG00000031804	CSTF2	87	82.231	Pan_paniscus
ENSACIG00000012852	cstf2	96	57.986	ENSPPRG00000022492	CSTF2	84	82.645	Panthera_pardus
ENSACIG00000012852	cstf2	96	57.639	ENSPTIG00000009922	CSTF2	84	81.818	Panthera_tigris_altaica
ENSACIG00000012852	cstf2	96	59.964	ENSPTRG00000022090	CSTF2	87	82.231	Pan_troglodytes
ENSACIG00000012852	cstf2	97	73.868	ENSPANG00000002303	CSTF2	87	82.231	Papio_anubis
ENSACIG00000012852	cstf2	99	71.006	ENSPKIG00000005033	cstf2	93	72.358	Paramormyrops_kingsleyae
ENSACIG00000012852	cstf2	96	87.393	ENSPMGG00000006534	cstf2	96	86.966	Periophthalmus_magnuspinnatus
ENSACIG00000012852	cstf2	96	57.366	ENSPEMG00000019415	Cstf2	87	83.333	Peromyscus_maniculatus_bairdii
ENSACIG00000012852	cstf2	97	57.546	ENSPCIG00000002989	CSTF2	85	85.537	Phascolarctos_cinereus
ENSACIG00000012852	cstf2	96	80.730	ENSPLAG00000011176	cstf2	96	80.325	Poecilia_latipinna
ENSACIG00000012852	cstf2	96	79.716	ENSPMEG00000017743	cstf2	96	80.122	Poecilia_mexicana
ENSACIG00000012852	cstf2	66	82.388	ENSPREG00000011481	cstf2	97	73.048	Poecilia_reticulata
ENSACIG00000012852	cstf2	96	56.040	ENSPPYG00000020541	CSTF2	84	82.231	Pongo_abelii
ENSACIG00000012852	cstf2	97	59.002	ENSPCOG00000027744	CSTF2	87	82.231	Propithecus_coquereli
ENSACIG00000012852	cstf2	93	46.975	ENSPVAG00000008342	CSTF2	100	44.621	Pteropus_vampyrus
ENSACIG00000012852	cstf2	100	91.111	ENSPNYG00000010852	cstf2	96	91.807	Pundamilia_nyererei
ENSACIG00000012852	cstf2	96	57.539	ENSRNOG00000048025	Cstf2	87	83.884	Rattus_norvegicus
ENSACIG00000012852	cstf2	97	59.571	ENSRBIG00000030745	CSTF2	99	59.459	Rhinopithecus_bieti
ENSACIG00000012852	cstf2	96	59.785	ENSRROG00000045042	CSTF2	87	82.231	Rhinopithecus_roxellana
ENSACIG00000012852	cstf2	97	73.868	ENSSBOG00000021649	CSTF2	80	82.231	Saimiri_boliviensis_boliviensis
ENSACIG00000012852	cstf2	88	82.692	ENSSHAG00000003681	CSTF2	83	82.692	Sarcophilus_harrisii
ENSACIG00000012852	cstf2	96	68.441	ENSSFOG00015006348	cstf2	97	70.428	Scleropages_formosus
ENSACIG00000012852	cstf2	100	83.773	ENSSMAG00000013463	cstf2	96	85.021	Scophthalmus_maximus
ENSACIG00000012852	cstf2	97	57.996	ENSSPUG00000005288	-	52	84.362	Sphenodon_punctatus
ENSACIG00000012852	cstf2	96	59.960	ENSSSCG00000012486	CSTF2	87	82.645	Sus_scrofa
ENSACIG00000012852	cstf2	97	58.221	ENSTGUG00000002253	CSTF2	89	83.133	Taeniopygia_guttata
ENSACIG00000012852	cstf2	97	77.668	ENSTNIG00000016860	cstf2	99	78.400	Tetraodon_nigroviridis
ENSACIG00000012852	cstf2	96	74.823	ENSUAMG00000026605	CSTF2	84	83.058	Ursus_americanus
ENSACIG00000012852	cstf2	97	73.519	ENSUMAG00000012417	CSTF2	79	82.645	Ursus_maritimus
ENSACIG00000012852	cstf2	96	57.812	ENSVVUG00000004717	CSTF2	99	56.110	Vulpes_vulpes
ENSACIG00000012852	cstf2	75	98.485	ENSXCOG00000016436	cstf2	96	67.429	Xiphophorus_couchianus
ENSACIG00000012852	cstf2	66	87.421	ENSXMAG00000013524	cstf2	96	76.402	Xiphophorus_maculatus