EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000012881 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Plus strand
Length
43377 bases
Position
chrCCOE01001726.1:155505-198881
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000016564tRNA_anti-codonPF01336.252.8e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000017008RPA1 (1 of many)-2011767-ENSACIP00000016564588 (aa)--
Gene Model
Click here to download ENSACIG00000012881's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012881's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000012881RPA19954.344ENSACIG00000007277rpa19954.344
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000012881RPA19962.521ENSAPOG00000011658rpa19961.724Acanthochromis_polyacanthus
ENSACIG00000012881RPA19973.353ENSAPOG00000019409RPA19673.204Acanthochromis_polyacanthus
ENSACIG00000012881RPA19959.391ENSAMEG00000007706RPA19559.391Ailuropoda_melanoleuca
ENSACIG00000012881RPA19962.692ENSAOCG00000023376rpa19962.069Amphiprion_ocellaris
ENSACIG00000012881RPA19978.491ENSAOCG00000009003RPA19678.812Amphiprion_ocellaris
ENSACIG00000012881RPA19962.521ENSAPEG00000008634rpa19962.069Amphiprion_percula
ENSACIG00000012881RPA19977.273ENSAPEG00000019132RPA19677.429Amphiprion_percula
ENSACIG00000012881RPA19979.459ENSATEG00000006443RPA19679.459Anabas_testudineus
ENSACIG00000012881RPA19961.670ENSATEG00000022024rpa19961.670Anabas_testudineus
ENSACIG00000012881RPA19950.000ENSAPLG00000012442RPA19850.000Anas_platyrhynchos
ENSACIG00000012881RPA19954.068ENSACAG00000014490RPA19453.729Anolis_carolinensis
ENSACIG00000012881RPA19959.022ENSANAG00000023456RPA19759.022Aotus_nancymaae
ENSACIG00000012881RPA19863.652ENSACLG00000006640rpa19963.652Astatotilapia_calliptera
ENSACIG00000012881RPA110086.179ENSACLG00000005223RPA19686.179Astatotilapia_calliptera
ENSACIG00000012881RPA19962.862ENSAMXG00000008418rpa19962.010Astyanax_mexicanus
ENSACIG00000012881RPA19957.770ENSBTAG00000009711RPA19557.770Bos_taurus
ENSACIG00000012881RPA19958.574ENSCJAG00000001848RPA19558.446Callithrix_jacchus
ENSACIG00000012881RPA19958.136ENSCAFG00000019249RPA19558.305Canis_familiaris
ENSACIG00000012881RPA19958.136ENSCAFG00020009847RPA19558.305Canis_lupus_dingo
ENSACIG00000012881RPA19956.780ENSCHIG00000026308RPA19557.336Capra_hircus
ENSACIG00000012881RPA19957.725ENSTSYG00000003482-9557.725Carlito_syrichta
ENSACIG00000012881RPA19957.983ENSCPOG00000000035RPA19557.983Cavia_porcellus
ENSACIG00000012881RPA19949.236ENSCCAG00000010981RPA19549.155Cebus_capucinus
ENSACIG00000012881RPA19958.992ENSCLAG00000005185-9558.992Chinchilla_lanigera
ENSACIG00000012881RPA19955.987ENSCLAG00000015045-9555.987Chinchilla_lanigera
ENSACIG00000012881RPA19949.322ENSCSAG00000013833RPA19549.322Chlorocebus_sabaeus
ENSACIG00000012881RPA19956.780ENSCHOG00000013540-9956.780Choloepus_hoffmanni
ENSACIG00000012881RPA17465.596ENSCHOG00000009454-9965.596Choloepus_hoffmanni
ENSACIG00000012881RPA19957.555ENSCPBG00000020377RPA19957.867Chrysemys_picta_bellii
ENSACIG00000012881RPA19843.568ENSCING00000023482-9443.568Ciona_intestinalis
ENSACIG00000012881RPA19958.234ENSCANG00000030911RPA19758.234Colobus_angolensis_palliatus
ENSACIG00000012881RPA19958.065ENSCGRG00001008197Rpa19558.065Cricetulus_griseus_chok1gshd
ENSACIG00000012881RPA18557.937ENSCGRG00000000582Rpa19957.937Cricetulus_griseus_crigri
ENSACIG00000012881RPA19962.181ENSCSEG00000013066rpa19761.499Cynoglossus_semilaevis
ENSACIG00000012881RPA19968.473ENSCSEG00000012726RPA19969.374Cynoglossus_semilaevis
ENSACIG00000012881RPA19673.430ENSCVAG00000013446-9273.430Cyprinodon_variegatus
ENSACIG00000012881RPA19962.862ENSCVAG00000019431rpa19963.112Cyprinodon_variegatus
ENSACIG00000012881RPA19963.714ENSDARG00000003938rpa19563.714Danio_rerio
ENSACIG00000012881RPA19957.627ENSDNOG00000017218RPA19557.627Dasypus_novemcinctus
ENSACIG00000012881RPA19959.322ENSDORG00000006199Rpa19758.953Dipodomys_ordii
ENSACIG00000012881RPA19937.669FBgn0010173RpA-709438.176Drosophila_melanogaster
ENSACIG00000012881RPA18264.948ENSETEG00000017608RPA17864.948Echinops_telfairi
ENSACIG00000012881RPA19958.844ENSEASG00005009372RPA19957.686Equus_asinus_asinus
ENSACIG00000012881RPA19958.277ENSECAG00000023886RPA19558.277Equus_caballus
ENSACIG00000012881RPA17164.593ENSEEUG00000002186-6864.593Erinaceus_europaeus
ENSACIG00000012881RPA19964.055ENSELUG00000021071rpa19564.055Esox_lucius
ENSACIG00000012881RPA19264.457ENSELUG00000006136RPA19964.457Esox_lucius
ENSACIG00000012881RPA19959.528ENSFCAG00000006306RPA19559.528Felis_catus
ENSACIG00000012881RPA110056.639ENSFALG00000006575RPA19556.639Ficedula_albicollis
ENSACIG00000012881RPA110058.784ENSFDAG00000007720RPA19558.784Fukomys_damarensis
ENSACIG00000012881RPA19963.032ENSFHEG00000003580rpa19563.032Fundulus_heteroclitus
ENSACIG00000012881RPA19960.477ENSGMOG00000010382rpa19560.477Gadus_morhua
ENSACIG00000012881RPA110056.661ENSGALG00000003072RPA19556.661Gallus_gallus
ENSACIG00000012881RPA19961.840ENSGAFG00000012916rpa19661.840Gambusia_affinis
ENSACIG00000012881RPA19974.286ENSGAFG00000020953RPA19674.286Gambusia_affinis
ENSACIG00000012881RPA19961.158ENSGACG00000010856rpa19561.158Gasterosteus_aculeatus
ENSACIG00000012881RPA19957.895ENSGAGG00000013611RPA19557.895Gopherus_agassizii
ENSACIG00000012881RPA19957.385ENSGGOG00000014186RPA19557.385Gorilla_gorilla
ENSACIG00000012881RPA110074.916ENSHBUG00000009348RPA19974.916Haplochromis_burtoni
ENSACIG00000012881RPA19963.032ENSHBUG00000017773rpa19563.032Haplochromis_burtoni
ENSACIG00000012881RPA19958.037ENSHGLG00000008846RPA19558.754Heterocephalus_glaber_female
ENSACIG00000012881RPA19949.233ENSHGLG00100002005-9449.576Heterocephalus_glaber_male
ENSACIG00000012881RPA19954.392ENSHGLG00100000799-9554.392Heterocephalus_glaber_male
ENSACIG00000012881RPA19958.037ENSHGLG00100017755-9558.754Heterocephalus_glaber_male
ENSACIG00000012881RPA19957.949ENSHCOG00000001401rpa19557.288Hippocampus_comes
ENSACIG00000012881RPA19850.427ENSHCOG00000000351RPA19350.427Hippocampus_comes
ENSACIG00000012881RPA19963.373ENSIPUG00000004400rpa19563.373Ictalurus_punctatus
ENSACIG00000012881RPA19755.442ENSSTOG00000022475RPA19855.442Ictidomys_tridecemlineatus
ENSACIG00000012881RPA19959.865ENSJJAG00000000876Rpa19859.865Jaculus_jaculus
ENSACIG00000012881RPA19977.759ENSKMAG00000000234RPA19577.759Kryptolebias_marmoratus
ENSACIG00000012881RPA19961.993ENSKMAG00000005605rpa19562.226Kryptolebias_marmoratus
ENSACIG00000012881RPA19971.386ENSLBEG00000002281RPA19970.136Labrus_bergylta
ENSACIG00000012881RPA19960.714ENSLBEG00000021604rpa19560.714Labrus_bergylta
ENSACIG00000012881RPA17758.584ENSLACG00000007210RPA19458.584Latimeria_chalumnae
ENSACIG00000012881RPA19960.884ENSLOCG00000006397rpa19560.884Lepisosteus_oculatus
ENSACIG00000012881RPA19956.784ENSLAFG00000015354RPA19556.784Loxodonta_africana
ENSACIG00000012881RPA18357.809ENSMFAG00000036138-9757.809Macaca_fascicularis
ENSACIG00000012881RPA19954.329ENSMMUG00000002442-9554.329Macaca_mulatta
ENSACIG00000012881RPA19958.644ENSMMUG00000011604-9758.644Macaca_mulatta
ENSACIG00000012881RPA19958.305ENSMNEG00000031632-9858.305Macaca_nemestrina
ENSACIG00000012881RPA17659.465ENSMNEG00000029837-8259.465Macaca_nemestrina
ENSACIG00000012881RPA19955.236ENSMLEG00000038768-9755.236Mandrillus_leucophaeus
ENSACIG00000012881RPA19977.399ENSMAMG00000020097RPA19676.935Mastacembelus_armatus
ENSACIG00000012881RPA19961.840ENSMAMG00000017993rpa19961.034Mastacembelus_armatus
ENSACIG00000012881RPA19962.862ENSMZEG00005007551rpa19960.900Maylandia_zebra
ENSACIG00000012881RPA110086.179ENSMZEG00005024731RPA19686.179Maylandia_zebra
ENSACIG00000012881RPA110056.271ENSMGAG00000005315RPA19556.271Meleagris_gallopavo
ENSACIG00000012881RPA19958.814ENSMAUG00000010474Rpa19759.153Mesocricetus_auratus
ENSACIG00000012881RPA19958.404ENSMICG00000012867RPA19558.404Microcebus_murinus
ENSACIG00000012881RPA19958.262ENSMOCG00000013019Rpa19558.262Microtus_ochrogaster
ENSACIG00000012881RPA110078.741ENSMMOG00000010868RPA19581.222Mola_mola
ENSACIG00000012881RPA19962.862ENSMMOG00000014292rpa19962.862Mola_mola
ENSACIG00000012881RPA19958.714ENSMODG00000010549RPA19558.714Monodelphis_domestica
ENSACIG00000012881RPA19970.827ENSMALG00000001208RPA19769.811Monopterus_albus
ENSACIG00000012881RPA19962.222ENSMALG00000011453rpa19562.222Monopterus_albus
ENSACIG00000012881RPA19959.391MGP_CAROLIEiJ_G0016734Rpa19559.391Mus_caroli
ENSACIG00000012881RPA19958.961ENSMUSG00000000751Rpa19558.961Mus_musculus
ENSACIG00000012881RPA19958.992MGP_PahariEiJ_G0017871Rpa19558.992Mus_pahari
ENSACIG00000012881RPA19959.030MGP_SPRETEiJ_G0017577Rpa19559.030Mus_spretus
ENSACIG00000012881RPA19958.305ENSMPUG00000013119RPA19558.305Mustela_putorius_furo
ENSACIG00000012881RPA19957.966ENSMLUG00000006113RPA19457.966Myotis_lucifugus
ENSACIG00000012881RPA19958.545ENSNGAG00000004522Rpa19458.545Nannospalax_galili
ENSACIG00000012881RPA110083.080ENSNBRG00000009672RPA19483.080Neolamprologus_brichardi
ENSACIG00000012881RPA19963.103ENSNBRG00000020595rpa19963.103Neolamprologus_brichardi
ENSACIG00000012881RPA19958.206ENSNLEG00000017149RPA19558.574Nomascus_leucogenys
ENSACIG00000012881RPA19951.100ENSMEUG00000006714RPA19651.100Notamacropus_eugenii
ENSACIG00000012881RPA19957.763ENSODEG00000009038RPA19657.763Octodon_degus
ENSACIG00000012881RPA19962.585ENSONIG00000013135rpa19562.585Oreochromis_niloticus
ENSACIG00000012881RPA19958.655ENSOANG00000010880RPA19758.655Ornithorhynchus_anatinus
ENSACIG00000012881RPA19956.129ENSOCUG00000001504RPA19556.129Oryctolagus_cuniculus
ENSACIG00000012881RPA19963.158ENSORLG00000004856rpa19563.158Oryzias_latipes
ENSACIG00000012881RPA19974.684ENSORLG00000003368RPA19674.684Oryzias_latipes
ENSACIG00000012881RPA19973.913ENSORLG00020015284RPA19673.913Oryzias_latipes_hni
ENSACIG00000012881RPA19962.988ENSORLG00020008980rpa19562.988Oryzias_latipes_hni
ENSACIG00000012881RPA17382.258ENSORLG00015005867-9982.258Oryzias_latipes_hsok
ENSACIG00000012881RPA19975.000ENSORLG00015020383RPA19675.000Oryzias_latipes_hsok
ENSACIG00000012881RPA19962.988ENSORLG00015013982rpa19562.988Oryzias_latipes_hsok
ENSACIG00000012881RPA19960.951ENSOMEG00000004704rpa19560.951Oryzias_melastigma
ENSACIG00000012881RPA19974.017ENSOMEG00000011040RPA19974.017Oryzias_melastigma
ENSACIG00000012881RPA19958.277ENSOGAG00000005581-9558.277Otolemur_garnettii
ENSACIG00000012881RPA19451.331ENSOGAG00000029379-9451.331Otolemur_garnettii
ENSACIG00000012881RPA19956.706ENSOARG00000014479RPA19557.264Ovis_aries
ENSACIG00000012881RPA19958.913ENSPPAG00000039680RPA19558.913Pan_paniscus
ENSACIG00000012881RPA19959.865ENSPPRG00000011807RPA19559.865Panthera_pardus
ENSACIG00000012881RPA19959.865ENSPTIG00000007898RPA19559.865Panthera_tigris_altaica
ENSACIG00000012881RPA19958.744ENSPTRG00000008539RPA19558.744Pan_troglodytes
ENSACIG00000012881RPA19958.814ENSPANG00000024592RPA19558.814Papio_anubis
ENSACIG00000012881RPA19463.571ENSPKIG00000008053rpa19064.093Paramormyrops_kingsleyae
ENSACIG00000012881RPA19956.537ENSPSIG00000015617RPA19756.537Pelodiscus_sinensis
ENSACIG00000012881RPA19962.010ENSPMGG00000011589rpa19862.010Periophthalmus_magnuspinnatus
ENSACIG00000012881RPA19771.880ENSPMGG00000000543RPA19971.880Periophthalmus_magnuspinnatus
ENSACIG00000012881RPA19958.673ENSPEMG00000021061Rpa19558.673Peromyscus_maniculatus_bairdii
ENSACIG00000012881RPA19958.305ENSPCIG00000019049RPA19558.883Phascolarctos_cinereus
ENSACIG00000012881RPA19962.351ENSPFOG00000003987rpa19562.351Poecilia_formosa
ENSACIG00000012881RPA19474.368ENSPLAG00000008844-9374.368Poecilia_latipinna
ENSACIG00000012881RPA19962.351ENSPLAG00000004984rpa19562.351Poecilia_latipinna
ENSACIG00000012881RPA19962.351ENSPMEG00000020602rpa19962.172Poecilia_mexicana
ENSACIG00000012881RPA19474.536ENSPMEG00000003627-9274.536Poecilia_mexicana
ENSACIG00000012881RPA19971.803ENSPREG00000010119RPA19671.803Poecilia_reticulata
ENSACIG00000012881RPA19456.937ENSPREG00000010174rpa19256.937Poecilia_reticulata
ENSACIG00000012881RPA19958.644ENSPCOG00000001799RPA19558.644Propithecus_coquereli
ENSACIG00000012881RPA19957.770ENSPVAG00000002149RPA19557.770Pteropus_vampyrus
ENSACIG00000012881RPA110086.341ENSPNYG00000024165RPA19686.341Pundamilia_nyererei
ENSACIG00000012881RPA19963.032ENSPNYG00000016316rpa19963.605Pundamilia_nyererei
ENSACIG00000012881RPA19956.122ENSPNAG00000008599rpa19656.873Pygocentrus_nattereri
ENSACIG00000012881RPA19961.165ENSRNOG00000003123Rpa19559.492Rattus_norvegicus
ENSACIG00000012881RPA19958.644ENSRBIG00000036587RPA19558.644Rhinopithecus_bieti
ENSACIG00000012881RPA19955.085ENSRROG00000043278RPA19555.085Rhinopithecus_roxellana
ENSACIG00000012881RPA18932.707YAR007CRFA18432.707Saccharomyces_cerevisiae
ENSACIG00000012881RPA19559.034ENSSBOG00000030233RPA19758.897Saimiri_boliviensis_boliviensis
ENSACIG00000012881RPA19959.528ENSSHAG00000007969RPA19559.696Sarcophilus_harrisii
ENSACIG00000012881RPA19965.593ENSSFOG00015005362rpa18865.593Scleropages_formosus
ENSACIG00000012881RPA19976.063ENSSMAG00000019746RPA19676.378Scophthalmus_maximus
ENSACIG00000012881RPA19962.521ENSSDUG00000011949rpa19562.521Seriola_dumerili
ENSACIG00000012881RPA19976.758ENSSDUG00000016358RPA19676.911Seriola_dumerili
ENSACIG00000012881RPA19962.521ENSSLDG00000011806rpa19562.521Seriola_lalandi_dorsalis
ENSACIG00000012881RPA19974.659ENSSLDG00000020784RPA19675.266Seriola_lalandi_dorsalis
ENSACIG00000012881RPA19948.557ENSSARG00000007506RPA19748.557Sorex_araneus
ENSACIG00000012881RPA19955.424ENSSPUG00000007223RPA19755.424Sphenodon_punctatus
ENSACIG00000012881RPA19980.205ENSSPAG00000011165RPA19779.762Stegastes_partitus
ENSACIG00000012881RPA19962.010ENSSPAG00000009903rpa19562.010Stegastes_partitus
ENSACIG00000012881RPA19958.305ENSSSCG00000017822RPA19758.446Sus_scrofa
ENSACIG00000012881RPA110057.095ENSTGUG00000005775RPA19557.095Taeniopygia_guttata
ENSACIG00000012881RPA19961.840ENSTRUG00000003616rpa19561.840Takifugu_rubripes
ENSACIG00000012881RPA19981.489ENSTRUG00000000405RPA19679.648Takifugu_rubripes
ENSACIG00000012881RPA19962.309ENSTNIG00000016199rpa19562.415Tetraodon_nigroviridis
ENSACIG00000012881RPA17464.612ENSTBEG00000002709RPA17364.612Tupaia_belangeri
ENSACIG00000012881RPA19957.216ENSTTRG00000001169RPA19557.770Tursiops_truncatus
ENSACIG00000012881RPA18976.923ENSUAMG00000015676RPA19476.923Ursus_americanus
ENSACIG00000012881RPA19959.153ENSUMAG00000009328RPA19559.492Ursus_maritimus
ENSACIG00000012881RPA19956.588ENSVPAG00000009443RPA19556.588Vicugna_pacos
ENSACIG00000012881RPA19958.305ENSVVUG00000021715RPA19558.475Vulpes_vulpes
ENSACIG00000012881RPA19959.694ENSXETG00000013538rpa19560.884Xenopus_tropicalis
ENSACIG00000012881RPA19975.597ENSXCOG00000009899-9975.597Xiphophorus_couchianus
ENSACIG00000012881RPA19461.622ENSXCOG00000010068rpa19461.622Xiphophorus_couchianus
ENSACIG00000012881RPA19961.670ENSXMAG00000004102rpa19961.646Xiphophorus_maculatus
ENSACIG00000012881RPA19969.481ENSXMAG00000010333RPA19669.037Xiphophorus_maculatus

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