EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000012994 (Gene tree)
Gene ID: -
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family%2C member 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 47755 bases
Position: chrCCOE01001568.1:34663-82417
Accession: ZDB-GENE-030131-5386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000016715	La	PF05383.17	5.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000017165	-	3018	-	ENSACIP00000016715	1005 (aa)	-	-

Gene Model

Click here to download ENSACIG00000012994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000012994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000012994	larp1	92	50.800	ENSACIG00000023890	larp1b	92	51.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000012994	larp1	81	74.560	ENSG00000155506	LARP1	89	82.099	Homo_sapiens
ENSACIG00000012994	larp1	87	93.665	ENSAPOG00000020685	larp1	99	93.665	Acanthochromis_polyacanthus
ENSACIG00000012994	larp1	80	74.763	ENSAMEG00000016673	LARP1	91	74.766	Ailuropoda_melanoleuca
ENSACIG00000012994	larp1	78	83.137	ENSAOCG00000007792	larp1	100	83.137	Amphiprion_ocellaris
ENSACIG00000012994	larp1	100	80.952	ENSAPEG00000022246	larp1	100	80.952	Amphiprion_percula
ENSACIG00000012994	larp1	99	79.131	ENSATEG00000013523	larp1	100	80.130	Anabas_testudineus
ENSACIG00000012994	larp1	77	79.583	ENSAPLG00000007559	LARP1	91	79.204	Anas_platyrhynchos
ENSACIG00000012994	larp1	82	69.908	ENSACAG00000004071	LARP1	97	70.252	Anolis_carolinensis
ENSACIG00000012994	larp1	80	74.627	ENSANAG00000029949	LARP1	99	63.921	Aotus_nancymaae
ENSACIG00000012994	larp1	93	93.631	ENSACLG00000015256	larp1	100	83.242	Astatotilapia_calliptera
ENSACIG00000012994	larp1	99	70.199	ENSAMXG00000000859	larp1	99	70.293	Astyanax_mexicanus
ENSACIG00000012994	larp1	95	74.665	ENSBTAG00000008443	LARP1	93	74.538	Bos_taurus
ENSACIG00000012994	larp1	94	74.627	ENSCJAG00000004454	LARP1	93	74.633	Callithrix_jacchus
ENSACIG00000012994	larp1	80	74.627	ENSCAFG00000017639	LARP1	99	64.577	Canis_familiaris
ENSACIG00000012994	larp1	76	74.627	ENSCAFG00020023860	LARP1	89	74.633	Canis_lupus_dingo
ENSACIG00000012994	larp1	95	74.494	ENSCHIG00000014414	LARP1	99	60.364	Capra_hircus
ENSACIG00000012994	larp1	80	75.951	ENSTSYG00000013732	LARP1	98	67.503	Carlito_syrichta
ENSACIG00000012994	larp1	73	75.296	ENSCAPG00000013865	LARP1	77	74.381	Cavia_aperea
ENSACIG00000012994	larp1	78	76.676	ENSCPOG00000003377	LARP1	99	64.675	Cavia_porcellus
ENSACIG00000012994	larp1	94	74.627	ENSCCAG00000025201	LARP1	93	74.633	Cebus_capucinus
ENSACIG00000012994	larp1	99	61.682	ENSCATG00000030675	LARP1	99	62.465	Cercocebus_atys
ENSACIG00000012994	larp1	81	75.778	ENSCLAG00000012755	LARP1	99	66.774	Chinchilla_lanigera
ENSACIG00000012994	larp1	81	69.882	ENSCSAG00000010800	LARP1	98	70.388	Chlorocebus_sabaeus
ENSACIG00000012994	larp1	78	67.057	ENSCHOG00000012716	LARP1	85	67.057	Choloepus_hoffmanni
ENSACIG00000012994	larp1	89	68.275	ENSCPBG00000002173	LARP1	94	68.703	Chrysemys_picta_bellii
ENSACIG00000012994	larp1	84	75.068	ENSCANG00000037418	LARP1	96	62.714	Colobus_angolensis_palliatus
ENSACIG00000012994	larp1	99	60.603	ENSCGRG00001016913	Larp1	99	60.711	Cricetulus_griseus_chok1gshd
ENSACIG00000012994	larp1	82	64.661	ENSCGRG00000009916	Larp1	99	64.661	Cricetulus_griseus_crigri
ENSACIG00000012994	larp1	100	78.421	ENSCSEG00000016431	larp1	100	79.706	Cynoglossus_semilaevis
ENSACIG00000012994	larp1	99	77.747	ENSCVAG00000022687	larp1	100	77.493	Cyprinodon_variegatus
ENSACIG00000012994	larp1	89	68.658	ENSDARG00000101722	larp1	96	70.043	Danio_rerio
ENSACIG00000012994	larp1	94	74.898	ENSDNOG00000012073	LARP1	92	74.332	Dasypus_novemcinctus
ENSACIG00000012994	larp1	85	65.904	ENSDORG00000002897	Larp1	98	66.558	Dipodomys_ordii
ENSACIG00000012994	larp1	65	77.515	ENSETEG00000020251	LARP1	97	66.628	Echinops_telfairi
ENSACIG00000012994	larp1	99	61.851	ENSEASG00005001070	LARP1	99	62.677	Equus_asinus_asinus
ENSACIG00000012994	larp1	99	62.382	ENSECAG00000017002	LARP1	78	63.019	Equus_caballus
ENSACIG00000012994	larp1	80	71.274	ENSEEUG00000001065	LARP1	88	71.429	Erinaceus_europaeus
ENSACIG00000012994	larp1	99	70.691	ENSELUG00000019403	larp1	99	70.783	Esox_lucius
ENSACIG00000012994	larp1	94	74.627	ENSFCAG00000000592	LARP1	99	60.505	Felis_catus
ENSACIG00000012994	larp1	72	76.735	ENSFALG00000008335	LARP1	90	76.735	Ficedula_albicollis
ENSACIG00000012994	larp1	71	75.068	ENSFDAG00000021125	LARP1	78	74.933	Fukomys_damarensis
ENSACIG00000012994	larp1	61	69.494	ENSFHEG00000020307	larp1	92	80.303	Fundulus_heteroclitus
ENSACIG00000012994	larp1	99	62.884	ENSGALG00000040109	LARP1	97	69.002	Gallus_gallus
ENSACIG00000012994	larp1	96	77.476	ENSGAGG00000025113	LARP1	94	76.872	Gopherus_agassizii
ENSACIG00000012994	larp1	82	74.763	ENSGGOG00000006048	LARP1	94	63.720	Gorilla_gorilla
ENSACIG00000012994	larp1	100	82.891	ENSHBUG00000020762	larp1	100	83.806	Haplochromis_burtoni
ENSACIG00000012994	larp1	94	75.372	ENSHGLG00000006267	LARP1	92	74.800	Heterocephalus_glaber_female
ENSACIG00000012994	larp1	86	58.009	ENSHGLG00100003395	-	90	57.476	Heterocephalus_glaber_male
ENSACIG00000012994	larp1	80	75.372	ENSHGLG00100014230	-	91	74.800	Heterocephalus_glaber_male
ENSACIG00000012994	larp1	91	91.687	ENSHCOG00000010786	larp1	99	91.932	Hippocampus_comes
ENSACIG00000012994	larp1	87	72.454	ENSIPUG00000019105	Larp1	95	72.669	Ictalurus_punctatus
ENSACIG00000012994	larp1	85	66.630	ENSSTOG00000005678	LARP1	98	66.993	Ictidomys_tridecemlineatus
ENSACIG00000012994	larp1	94	69.684	ENSJJAG00000016950	Larp1	70	69.636	Jaculus_jaculus
ENSACIG00000012994	larp1	100	77.615	ENSKMAG00000018468	larp1	100	77.635	Kryptolebias_marmoratus
ENSACIG00000012994	larp1	99	79.353	ENSLBEG00000027172	larp1	100	79.925	Labrus_bergylta
ENSACIG00000012994	larp1	94	70.700	ENSLOCG00000012457	larp1	99	70.900	Lepisosteus_oculatus
ENSACIG00000012994	larp1	94	74.054	ENSLAFG00000008991	LARP1	99	59.891	Loxodonta_africana
ENSACIG00000012994	larp1	80	74.763	ENSMFAG00000031651	LARP1	93	64.577	Macaca_fascicularis
ENSACIG00000012994	larp1	85	66.050	ENSMMUG00000009411	LARP1	99	66.522	Macaca_mulatta
ENSACIG00000012994	larp1	80	74.560	ENSMNEG00000039294	LARP1	98	67.607	Macaca_nemestrina
ENSACIG00000012994	larp1	80	74.763	ENSMLEG00000035142	LARP1	93	64.472	Mandrillus_leucophaeus
ENSACIG00000012994	larp1	100	81.958	ENSMAMG00000021788	larp1	100	82.901	Mastacembelus_armatus
ENSACIG00000012994	larp1	100	82.332	ENSMZEG00005009345	larp1	100	83.242	Maylandia_zebra
ENSACIG00000012994	larp1	86	66.383	ENSMGAG00000005696	LARP1	99	67.163	Meleagris_gallopavo
ENSACIG00000012994	larp1	99	60.110	ENSMAUG00000001385	Larp1	99	60.310	Mesocricetus_auratus
ENSACIG00000012994	larp1	81	73.720	ENSMICG00000000837	LARP1	98	71.599	Microcebus_murinus
ENSACIG00000012994	larp1	99	60.822	ENSMOCG00000008920	Larp1	99	61.005	Microtus_ochrogaster
ENSACIG00000012994	larp1	95	60.529	ENSMMOG00000013364	larp1	99	65.226	Mola_mola
ENSACIG00000012994	larp1	82	75.136	ENSMODG00000008663	LARP1	98	65.960	Monodelphis_domestica
ENSACIG00000012994	larp1	100	76.958	ENSMALG00000017180	larp1	97	87.529	Monopterus_albus
ENSACIG00000012994	larp1	94	75.238	MGP_CAROLIEiJ_G0016383	Larp1	69	74.665	Mus_caroli
ENSACIG00000012994	larp1	94	75.374	ENSMUSG00000037331	Larp1	69	74.799	Mus_musculus
ENSACIG00000012994	larp1	94	75.510	MGP_PahariEiJ_G0017518	Larp1	69	74.733	Mus_pahari
ENSACIG00000012994	larp1	94	75.374	MGP_SPRETEiJ_G0017225	Larp1	69	74.799	Mus_spretus
ENSACIG00000012994	larp1	81	56.536	ENSMPUG00000013564	LARP1	99	57.563	Mustela_putorius_furo
ENSACIG00000012994	larp1	85	61.562	ENSMLUG00000002608	LARP1	99	61.875	Myotis_lucifugus
ENSACIG00000012994	larp1	85	66.703	ENSNGAG00000001098	Larp1	99	66.522	Nannospalax_galili
ENSACIG00000012994	larp1	89	84.244	ENSNBRG00000008963	larp1	98	84.260	Neolamprologus_brichardi
ENSACIG00000012994	larp1	85	66.411	ENSNLEG00000016588	LARP1	99	66.886	Nomascus_leucogenys
ENSACIG00000012994	larp1	81	73.204	ENSMEUG00000002957	LARP1	99	64.572	Notamacropus_eugenii
ENSACIG00000012994	larp1	84	64.286	ENSOPRG00000013014	LARP1	99	64.848	Ochotona_princeps
ENSACIG00000012994	larp1	86	63.731	ENSODEG00000010824	LARP1	99	65.441	Octodon_degus
ENSACIG00000012994	larp1	99	82.149	ENSONIG00000017308	larp1	100	81.876	Oreochromis_niloticus
ENSACIG00000012994	larp1	86	64.918	ENSOANG00000005096	LARP1	91	75.000	Ornithorhynchus_anatinus
ENSACIG00000012994	larp1	94	75.203	ENSOCUG00000013066	LARP1	99	62.208	Oryctolagus_cuniculus
ENSACIG00000012994	larp1	100	74.191	ENSORLG00000000824	larp1	100	79.976	Oryzias_latipes
ENSACIG00000012994	larp1	100	74.561	ENSORLG00020022241	larp1	100	74.631	Oryzias_latipes_hni
ENSACIG00000012994	larp1	100	74.815	ENSORLG00015007538	larp1	100	75.301	Oryzias_latipes_hsok
ENSACIG00000012994	larp1	100	74.537	ENSOMEG00000003134	larp1	100	74.907	Oryzias_melastigma
ENSACIG00000012994	larp1	71	74.763	ENSOGAG00000016750	LARP1	94	66.224	Otolemur_garnettii
ENSACIG00000012994	larp1	82	74.431	ENSOARG00000009893	LARP1	91	75.100	Ovis_aries
ENSACIG00000012994	larp1	80	74.763	ENSPPAG00000042993	LARP1	93	64.472	Pan_paniscus
ENSACIG00000012994	larp1	85	64.084	ENSPPRG00000009780	LARP1	93	64.540	Panthera_pardus
ENSACIG00000012994	larp1	85	64.353	ENSPTIG00000007013	LARP1	93	64.811	Panthera_tigris_altaica
ENSACIG00000012994	larp1	99	61.553	ENSPTRG00000017447	LARP1	99	62.336	Pan_troglodytes
ENSACIG00000012994	larp1	99	61.682	ENSPANG00000008080	LARP1	99	62.465	Papio_anubis
ENSACIG00000012994	larp1	99	71.321	ENSPKIG00000010096	larp1	99	72.591	Paramormyrops_kingsleyae
ENSACIG00000012994	larp1	98	65.451	ENSPKIG00000017153	-	99	66.399	Paramormyrops_kingsleyae
ENSACIG00000012994	larp1	95	74.223	ENSPMGG00000011599	larp1	98	74.223	Periophthalmus_magnuspinnatus
ENSACIG00000012994	larp1	85	66.558	ENSPEMG00000022523	Larp1	99	66.558	Peromyscus_maniculatus_bairdii
ENSACIG00000012994	larp1	94	77.483	ENSPCIG00000019242	LARP1	90	64.382	Phascolarctos_cinereus
ENSACIG00000012994	larp1	100	73.274	ENSPFOG00000005836	larp1	100	74.081	Poecilia_formosa
ENSACIG00000012994	larp1	100	75.115	ENSPLAG00000008936	larp1	100	75.482	Poecilia_latipinna
ENSACIG00000012994	larp1	100	73.184	ENSPMEG00000013656	larp1	100	73.543	Poecilia_mexicana
ENSACIG00000012994	larp1	86	74.871	ENSPREG00000005726	larp1	99	75.180	Poecilia_reticulata
ENSACIG00000012994	larp1	78	73.876	ENSPCAG00000006407	LARP1	97	63.215	Procavia_capensis
ENSACIG00000012994	larp1	80	65.400	ENSPCOG00000016949	LARP1	99	60.105	Propithecus_coquereli
ENSACIG00000012994	larp1	92	76.783	ENSPVAG00000002262	LARP1	99	60.450	Pteropus_vampyrus
ENSACIG00000012994	larp1	100	82.240	ENSPNYG00000007938	larp1	100	83.424	Pundamilia_nyererei
ENSACIG00000012994	larp1	99	70.755	ENSPNAG00000021427	larp1	99	71.075	Pygocentrus_nattereri
ENSACIG00000012994	larp1	85	66.957	ENSRNOG00000031544	Larp1	98	66.957	Rattus_norvegicus
ENSACIG00000012994	larp1	89	62.135	ENSRBIG00000038005	LARP1	96	62.877	Rhinopithecus_bieti
ENSACIG00000012994	larp1	77	74.560	ENSRROG00000034073	LARP1	98	67.833	Rhinopithecus_roxellana
ENSACIG00000012994	larp1	83	74.898	ENSSBOG00000019816	LARP1	99	66.811	Saimiri_boliviensis_boliviensis
ENSACIG00000012994	larp1	82	76.438	ENSSHAG00000011115	LARP1	99	67.094	Sarcophilus_harrisii
ENSACIG00000012994	larp1	98	68.792	ENSSFOG00015018058	-	99	69.267	Scleropages_formosus
ENSACIG00000012994	larp1	86	71.547	ENSSFOG00015020304	larp1	95	70.522	Scleropages_formosus
ENSACIG00000012994	larp1	93	81.855	ENSSMAG00000007468	larp1	98	82.762	Scophthalmus_maximus
ENSACIG00000012994	larp1	100	80.018	ENSSDUG00000000268	larp1	99	84.180	Seriola_dumerili
ENSACIG00000012994	larp1	82	83.199	ENSSLDG00000016505	larp1	99	83.834	Seriola_lalandi_dorsalis
ENSACIG00000012994	larp1	58	78.777	ENSSARG00000013907	-	88	79.783	Sorex_araneus
ENSACIG00000012994	larp1	99	62.489	ENSSPUG00000012179	-	99	62.795	Sphenodon_punctatus
ENSACIG00000012994	larp1	100	81.387	ENSSPAG00000003910	larp1	100	82.117	Stegastes_partitus
ENSACIG00000012994	larp1	94	74.831	ENSSSCG00000017069	LARP1	99	67.598	Sus_scrofa
ENSACIG00000012994	larp1	79	77.369	ENSTGUG00000000704	LARP1	100	66.485	Taeniopygia_guttata
ENSACIG00000012994	larp1	99	79.249	ENSTRUG00000009470	larp1	99	79.812	Takifugu_rubripes
ENSACIG00000012994	larp1	65	75.444	ENSTBEG00000003381	LARP1	99	64.054	Tupaia_belangeri
ENSACIG00000012994	larp1	79	74.499	ENSTTRG00000015934	LARP1	86	74.605	Tursiops_truncatus
ENSACIG00000012994	larp1	94	74.763	ENSUAMG00000019334	LARP1	99	60.524	Ursus_americanus
ENSACIG00000012994	larp1	85	66.270	ENSUMAG00000002934	LARP1	96	69.773	Ursus_maritimus
ENSACIG00000012994	larp1	76	74.627	ENSVVUG00000004644	LARP1	89	74.633	Vulpes_vulpes
ENSACIG00000012994	larp1	92	65.968	ENSXETG00000008413	larp1	97	66.533	Xenopus_tropicalis
ENSACIG00000012994	larp1	86	84.783	ENSXCOG00000004022	larp1	95	84.783	Xiphophorus_couchianus
ENSACIG00000012994	larp1	100	72.980	ENSXMAG00000018780	larp1	100	73.698	Xiphophorus_maculatus