EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000013005 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 12572 bases
Position: chrCCOE01000370.1:1060188-1072759
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000016792	ResIII	PF04851.15	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000017245	-	2631	-	ENSACIP00000016792	876 (aa)	-	-

Gene Model

Click here to download ENSACIG00000013005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000013005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000013005	rad54b	52	31.161	ENSACIG00000018326	smarcad1a	76	30.962
ENSACIG00000013005	rad54b	66	47.138	ENSACIG00000001939	rad54l	78	47.138
ENSACIG00000013005	rad54b	57	34.257	ENSACIG00000016982	smarca5	51	34.257
ENSACIG00000013005	rad54b	57	33.071	ENSACIG00000001164	chd1l	51	33.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000013005	rad54b	99	55.240	ENSG00000197275	RAD54B	99	55.240	Homo_sapiens
ENSACIG00000013005	rad54b	82	58.470	ENSG00000265817	FSBP	99	58.470	Homo_sapiens
ENSACIG00000013005	rad54b	99	54.565	ENSAMEG00000005834	-	99	54.565	Ailuropoda_melanoleuca
ENSACIG00000013005	rad54b	100	81.189	ENSAOCG00000008523	rad54b	100	81.189	Amphiprion_ocellaris
ENSACIG00000013005	rad54b	100	80.294	ENSAPEG00000001673	rad54b	100	80.294	Amphiprion_percula
ENSACIG00000013005	rad54b	100	83.790	ENSATEG00000001527	rad54b	100	83.790	Anabas_testudineus
ENSACIG00000013005	rad54b	94	62.121	ENSAPLG00000014366	-	91	62.121	Anas_platyrhynchos
ENSACIG00000013005	rad54b	89	59.949	ENSACAG00000003671	-	98	59.949	Anolis_carolinensis
ENSACIG00000013005	rad54b	73	59.815	ENSANAG00000019528	-	99	59.815	Aotus_nancymaae
ENSACIG00000013005	rad54b	100	89.534	ENSACLG00000007826	rad54b	100	89.647	Astatotilapia_calliptera
ENSACIG00000013005	rad54b	88	68.710	ENSAMXG00000039985	rad54b	94	68.354	Astyanax_mexicanus
ENSACIG00000013005	rad54b	99	55.131	ENSBTAG00000000632	RAD54B	99	55.131	Bos_taurus
ENSACIG00000013005	rad54b	81	35.027	WBGene00013792	Y116A8C.13	83	35.458	Caenorhabditis_elegans
ENSACIG00000013005	rad54b	99	54.744	ENSCJAG00000000080	-	99	58.219	Callithrix_jacchus
ENSACIG00000013005	rad54b	99	55.277	ENSCAFG00000009179	RAD54B	99	55.277	Canis_familiaris
ENSACIG00000013005	rad54b	99	55.277	ENSCAFG00020012084	-	99	55.277	Canis_lupus_dingo
ENSACIG00000013005	rad54b	99	55.022	ENSCHIG00000008230	-	99	55.022	Capra_hircus
ENSACIG00000013005	rad54b	99	55.410	ENSTSYG00000013234	-	99	55.410	Carlito_syrichta
ENSACIG00000013005	rad54b	99	55.921	ENSCPOG00000011643	-	99	55.921	Cavia_porcellus
ENSACIG00000013005	rad54b	99	55.206	ENSCCAG00000011754	-	99	57.995	Cebus_capucinus
ENSACIG00000013005	rad54b	99	54.536	ENSCATG00000030661	-	99	58.573	Cercocebus_atys
ENSACIG00000013005	rad54b	99	56.013	ENSCLAG00000010476	-	99	56.013	Chinchilla_lanigera
ENSACIG00000013005	rad54b	99	54.645	ENSCSAG00000012712	-	99	54.645	Chlorocebus_sabaeus
ENSACIG00000013005	rad54b	89	62.563	ENSCPBG00000003204	-	86	62.563	Chrysemys_picta_bellii
ENSACIG00000013005	rad54b	99	54.645	ENSCANG00000017939	-	99	58.436	Colobus_angolensis_palliatus
ENSACIG00000013005	rad54b	99	55.192	ENSCGRG00001020184	Rad54b	99	55.192	Cricetulus_griseus_chok1gshd
ENSACIG00000013005	rad54b	99	54.199	ENSCGRG00000016752	Rad54b	99	54.199	Cricetulus_griseus_crigri
ENSACIG00000013005	rad54b	99	79.566	ENSCSEG00000001601	rad54b	99	79.566	Cynoglossus_semilaevis
ENSACIG00000013005	rad54b	100	81.591	ENSCVAG00000009200	rad54b	100	81.591	Cyprinodon_variegatus
ENSACIG00000013005	rad54b	99	62.809	ENSDARG00000092134	rad54b	99	68.906	Danio_rerio
ENSACIG00000013005	rad54b	99	55.301	ENSDNOG00000015535	-	99	55.301	Dasypus_novemcinctus
ENSACIG00000013005	rad54b	99	55.942	ENSDORG00000002492	Rad54b	99	56.054	Dipodomys_ordii
ENSACIG00000013005	rad54b	87	57.557	ENSETEG00000010605	-	100	57.557	Echinops_telfairi
ENSACIG00000013005	rad54b	99	47.123	ENSEBUG00000009104	rad54b	98	47.123	Eptatretus_burgeri
ENSACIG00000013005	rad54b	89	58.742	ENSEASG00005004021	-	89	58.742	Equus_asinus_asinus
ENSACIG00000013005	rad54b	99	54.962	ENSECAG00000021949	-	99	54.962	Equus_caballus
ENSACIG00000013005	rad54b	74	52.500	ENSEEUG00000008056	-	72	52.500	Erinaceus_europaeus
ENSACIG00000013005	rad54b	96	78.294	ENSELUG00000009287	rad54b	91	78.294	Esox_lucius
ENSACIG00000013005	rad54b	99	54.733	ENSFCAG00000015513	-	99	58.880	Felis_catus
ENSACIG00000013005	rad54b	99	56.739	ENSFALG00000005467	-	99	56.583	Ficedula_albicollis
ENSACIG00000013005	rad54b	99	55.011	ENSFDAG00000020541	-	100	55.011	Fukomys_damarensis
ENSACIG00000013005	rad54b	99	76.606	ENSFHEG00000014382	rad54b	96	76.606	Fundulus_heteroclitus
ENSACIG00000013005	rad54b	91	80.224	ENSGMOG00000014774	rad54b	100	80.224	Gadus_morhua
ENSACIG00000013005	rad54b	89	61.761	ENSGALG00000043597	RAD54B	89	68.966	Gallus_gallus
ENSACIG00000013005	rad54b	99	82.400	ENSGAFG00000007901	rad54b	99	82.400	Gambusia_affinis
ENSACIG00000013005	rad54b	99	78.299	ENSGACG00000009128	rad54b	99	78.299	Gasterosteus_aculeatus
ENSACIG00000013005	rad54b	99	55.484	ENSGAGG00000018747	-	86	62.594	Gopherus_agassizii
ENSACIG00000013005	rad54b	99	54.803	ENSGGOG00000023516	-	99	54.803	Gorilla_gorilla
ENSACIG00000013005	rad54b	95	93.182	ENSHBUG00000016017	rad54b	90	93.182	Haplochromis_burtoni
ENSACIG00000013005	rad54b	99	54.221	ENSHGLG00000008263	RAD54B	99	54.221	Heterocephalus_glaber_female
ENSACIG00000013005	rad54b	99	53.548	ENSHGLG00100008108	-	99	53.548	Heterocephalus_glaber_male
ENSACIG00000013005	rad54b	99	73.889	ENSHCOG00000004764	rad54b	98	76.712	Hippocampus_comes
ENSACIG00000013005	rad54b	99	60.851	ENSIPUG00000018531	rad54b	99	60.851	Ictalurus_punctatus
ENSACIG00000013005	rad54b	99	53.450	ENSSTOG00000010791	-	99	53.693	Ictidomys_tridecemlineatus
ENSACIG00000013005	rad54b	99	53.913	ENSJJAG00000010314	Rad54b	99	53.913	Jaculus_jaculus
ENSACIG00000013005	rad54b	100	78.143	ENSKMAG00000004744	rad54b	100	78.143	Kryptolebias_marmoratus
ENSACIG00000013005	rad54b	84	63.600	ENSLACG00000000859	-	100	63.600	Latimeria_chalumnae
ENSACIG00000013005	rad54b	92	67.561	ENSLOCG00000010100	rad54b	96	67.722	Lepisosteus_oculatus
ENSACIG00000013005	rad54b	89	57.915	ENSLAFG00000015315	-	97	57.915	Loxodonta_africana
ENSACIG00000013005	rad54b	99	54.536	ENSMFAG00000031629	-	99	58.573	Macaca_fascicularis
ENSACIG00000013005	rad54b	99	54.536	ENSMMUG00000005659	-	99	54.536	Macaca_mulatta
ENSACIG00000013005	rad54b	99	54.326	ENSMNEG00000016408	-	99	54.326	Macaca_nemestrina
ENSACIG00000013005	rad54b	99	54.536	ENSMLEG00000006946	-	99	54.536	Mandrillus_leucophaeus
ENSACIG00000013005	rad54b	100	80.990	ENSMAMG00000012269	rad54b	99	80.990	Mastacembelus_armatus
ENSACIG00000013005	rad54b	95	93.308	ENSMZEG00005005281	rad54b	95	93.409	Maylandia_zebra
ENSACIG00000013005	rad54b	99	56.769	ENSMGAG00000012024	-	99	56.769	Meleagris_gallopavo
ENSACIG00000013005	rad54b	99	54.882	ENSMAUG00000013586	Rad54b	99	54.882	Mesocricetus_auratus
ENSACIG00000013005	rad54b	99	55.756	ENSMICG00000000754	-	99	55.756	Microcebus_murinus
ENSACIG00000013005	rad54b	99	55.111	ENSMOCG00000020035	Rad54b	99	55.111	Microtus_ochrogaster
ENSACIG00000013005	rad54b	99	80.226	ENSMMOG00000003394	rad54b	99	80.226	Mola_mola
ENSACIG00000013005	rad54b	89	58.512	ENSMODG00000007343	-	97	58.512	Monodelphis_domestica
ENSACIG00000013005	rad54b	73	87.893	ENSMALG00000001520	rad54b	100	87.893	Monopterus_albus
ENSACIG00000013005	rad54b	99	55.172	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.172	Mus_caroli
ENSACIG00000013005	rad54b	99	54.839	ENSMUSG00000078773	Rad54b	99	54.839	Mus_musculus
ENSACIG00000013005	rad54b	99	54.939	MGP_PahariEiJ_G0023933	Rad54b	99	54.939	Mus_pahari
ENSACIG00000013005	rad54b	99	55.295	MGP_SPRETEiJ_G0026758	Rad54b	99	55.295	Mus_spretus
ENSACIG00000013005	rad54b	89	59.068	ENSMPUG00000008878	-	97	59.068	Mustela_putorius_furo
ENSACIG00000013005	rad54b	99	55.180	ENSMLUG00000008953	-	99	55.229	Myotis_lucifugus
ENSACIG00000013005	rad54b	99	54.675	ENSNGAG00000017537	Rad54b	99	54.675	Nannospalax_galili
ENSACIG00000013005	rad54b	100	90.216	ENSNBRG00000013394	rad54b	100	90.216	Neolamprologus_brichardi
ENSACIG00000013005	rad54b	99	54.585	ENSNLEG00000003062	-	99	58.197	Nomascus_leucogenys
ENSACIG00000013005	rad54b	72	62.148	ENSMEUG00000012426	-	69	62.148	Notamacropus_eugenii
ENSACIG00000013005	rad54b	99	55.410	ENSODEG00000019564	-	99	55.410	Octodon_degus
ENSACIG00000013005	rad54b	82	75.000	ENSODEG00000002650	-	93	73.913	Octodon_degus
ENSACIG00000013005	rad54b	97	92.079	ENSONIG00000006067	rad54b	100	87.733	Oreochromis_niloticus
ENSACIG00000013005	rad54b	85	60.079	ENSOANG00000011348	-	99	60.079	Ornithorhynchus_anatinus
ENSACIG00000013005	rad54b	99	54.506	ENSOCUG00000016478	-	99	54.506	Oryctolagus_cuniculus
ENSACIG00000013005	rad54b	95	84.615	ENSORLG00000008918	rad54b	100	87.092	Oryzias_latipes
ENSACIG00000013005	rad54b	73	86.936	ENSORLG00020012171	rad54b	100	86.936	Oryzias_latipes_hni
ENSACIG00000013005	rad54b	95	84.131	ENSORLG00015018536	rad54b	90	84.131	Oryzias_latipes_hsok
ENSACIG00000013005	rad54b	87	85.640	ENSOMEG00000004345	rad54b	100	85.640	Oryzias_melastigma
ENSACIG00000013005	rad54b	99	52.459	ENSOGAG00000007854	-	99	52.459	Otolemur_garnettii
ENSACIG00000013005	rad54b	89	60.000	ENSOARG00000007691	-	97	60.000	Ovis_aries
ENSACIG00000013005	rad54b	99	54.039	ENSPPAG00000029572	-	99	54.039	Pan_paniscus
ENSACIG00000013005	rad54b	99	54.733	ENSPPRG00000007571	-	99	58.743	Panthera_pardus
ENSACIG00000013005	rad54b	82	58.880	ENSPTIG00000012670	-	99	58.880	Panthera_tigris_altaica
ENSACIG00000013005	rad54b	99	55.131	ENSPTRG00000020427	-	99	58.470	Pan_troglodytes
ENSACIG00000013005	rad54b	99	54.536	ENSPANG00000019566	-	99	54.536	Papio_anubis
ENSACIG00000013005	rad54b	99	63.952	ENSPKIG00000014974	rad54b	99	63.952	Paramormyrops_kingsleyae
ENSACIG00000013005	rad54b	99	56.237	ENSPSIG00000002383	-	96	61.202	Pelodiscus_sinensis
ENSACIG00000013005	rad54b	99	55.333	ENSPEMG00000012133	Rad54b	99	55.333	Peromyscus_maniculatus_bairdii
ENSACIG00000013005	rad54b	88	58.987	ENSPMAG00000002916	rad54b	98	58.861	Petromyzon_marinus
ENSACIG00000013005	rad54b	89	59.166	ENSPCIG00000020151	-	92	59.039	Phascolarctos_cinereus
ENSACIG00000013005	rad54b	99	78.326	ENSPFOG00000023411	rad54b	99	78.326	Poecilia_formosa
ENSACIG00000013005	rad54b	99	78.219	ENSPLAG00000010430	rad54b	99	78.219	Poecilia_latipinna
ENSACIG00000013005	rad54b	99	80.800	ENSPMEG00000016873	rad54b	99	80.800	Poecilia_mexicana
ENSACIG00000013005	rad54b	97	86.000	ENSPREG00000018443	rad54b	99	82.326	Poecilia_reticulata
ENSACIG00000013005	rad54b	99	54.298	ENSPPYG00000018750	-	99	54.248	Pongo_abelii
ENSACIG00000013005	rad54b	99	54.733	ENSPCOG00000026845	-	99	58.743	Propithecus_coquereli
ENSACIG00000013005	rad54b	84	57.543	ENSPVAG00000000261	-	86	57.543	Pteropus_vampyrus
ENSACIG00000013005	rad54b	89	91.762	ENSPNYG00000018303	rad54b	96	91.762	Pundamilia_nyererei
ENSACIG00000013005	rad54b	99	63.442	ENSPNAG00000000295	rad54b	99	63.442	Pygocentrus_nattereri
ENSACIG00000013005	rad54b	99	55.184	ENSRNOG00000039949	Rad54b	99	55.184	Rattus_norvegicus
ENSACIG00000013005	rad54b	99	54.208	ENSRBIG00000020419	-	99	54.208	Rhinopithecus_bieti
ENSACIG00000013005	rad54b	99	54.208	ENSRROG00000039897	-	99	54.258	Rhinopithecus_roxellana
ENSACIG00000013005	rad54b	83	37.328	YBR073W	RDH54	80	37.192	Saccharomyces_cerevisiae
ENSACIG00000013005	rad54b	99	54.694	ENSSBOG00000028501	-	99	54.694	Saimiri_boliviensis_boliviensis
ENSACIG00000013005	rad54b	99	54.783	ENSSHAG00000017038	-	99	54.783	Sarcophilus_harrisii
ENSACIG00000013005	rad54b	65	70.928	ENSSFOG00015008483	rad54b	89	70.928	Scleropages_formosus
ENSACIG00000013005	rad54b	95	87.105	ENSSMAG00000018659	rad54b	99	83.124	Scophthalmus_maximus
ENSACIG00000013005	rad54b	92	88.991	ENSSDUG00000001122	rad54b	85	88.991	Seriola_dumerili
ENSACIG00000013005	rad54b	95	89.029	ENSSLDG00000013787	rad54b	100	81.229	Seriola_lalandi_dorsalis
ENSACIG00000013005	rad54b	99	57.912	ENSSPUG00000016497	-	99	57.912	Sphenodon_punctatus
ENSACIG00000013005	rad54b	100	85.520	ENSSPAG00000012800	rad54b	100	85.520	Stegastes_partitus
ENSACIG00000013005	rad54b	99	55.801	ENSSSCG00000006101	-	98	59.470	Sus_scrofa
ENSACIG00000013005	rad54b	99	57.638	ENSTGUG00000011880	-	99	57.638	Taeniopygia_guttata
ENSACIG00000013005	rad54b	95	83.081	ENSTRUG00000010015	rad54b	89	83.081	Takifugu_rubripes
ENSACIG00000013005	rad54b	99	50.983	ENSTTRG00000006312	-	99	50.983	Tursiops_truncatus
ENSACIG00000013005	rad54b	99	54.723	ENSUMAG00000016401	-	99	54.723	Ursus_maritimus
ENSACIG00000013005	rad54b	99	54.367	ENSVPAG00000003157	-	99	54.367	Vicugna_pacos
ENSACIG00000013005	rad54b	99	48.842	ENSXETG00000025924	rad54b	98	53.291	Xenopus_tropicalis
ENSACIG00000013005	rad54b	99	81.486	ENSXMAG00000013141	rad54b	99	81.486	Xiphophorus_maculatus