EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000013116 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 3045 bases
Position: chrCCOE01001829.1:39982-43026
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000016820	RVT_1	PF00078.27	2.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000017275	-	3045	-	ENSACIP00000016820	1014 (aa)	-	-

Gene Model

Click here to download ENSACIG00000013116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000013116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000013116	-	100	81.838	ENSACIG00000012161	-	89	81.838
ENSACIG00000013116	-	86	85.567	ENSACIG00000009025	-	98	85.567
ENSACIG00000013116	-	99	85.745	ENSACIG00000007038	-	90	85.531
ENSACIG00000013116	-	84	83.953	ENSACIG00000010787	-	83	83.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000013116	-	80	40.049	ENSAMXG00000042811	-	70	40.049	Astyanax_mexicanus
ENSACIG00000013116	-	81	38.561	ENSCPBG00000003842	-	63	38.561	Chrysemys_picta_bellii
ENSACIG00000013116	-	87	39.370	ENSCVAG00000004138	-	84	39.370	Cyprinodon_variegatus
ENSACIG00000013116	-	81	38.929	ENSELUG00000004597	-	85	39.094	Esox_lucius
ENSACIG00000013116	-	71	37.157	ENSELUG00000004618	-	63	37.157	Esox_lucius
ENSACIG00000013116	-	76	41.184	ENSFHEG00000007211	-	80	38.870	Fundulus_heteroclitus
ENSACIG00000013116	-	83	36.203	ENSFHEG00000002865	-	72	36.203	Fundulus_heteroclitus
ENSACIG00000013116	-	85	40.233	ENSFHEG00000022106	-	84	39.250	Fundulus_heteroclitus
ENSACIG00000013116	-	82	39.192	ENSFHEG00000002853	-	78	39.192	Fundulus_heteroclitus
ENSACIG00000013116	-	57	40.956	ENSGMOG00000005227	-	98	41.267	Gadus_morhua
ENSACIG00000013116	-	50	36.084	ENSGACG00000000426	-	99	36.084	Gasterosteus_aculeatus
ENSACIG00000013116	-	80	39.902	ENSHCOG00000007389	-	76	39.902	Hippocampus_comes
ENSACIG00000013116	-	80	38.300	ENSHCOG00000000471	-	68	38.348	Hippocampus_comes
ENSACIG00000013116	-	80	34.951	ENSHCOG00000007436	-	74	34.746	Hippocampus_comes
ENSACIG00000013116	-	83	39.365	ENSHCOG00000007397	-	75	39.365	Hippocampus_comes
ENSACIG00000013116	-	74	41.833	ENSLBEG00000006732	-	89	41.833	Labrus_bergylta
ENSACIG00000013116	-	80	42.787	ENSLBEG00000003745	-	91	42.787	Labrus_bergylta
ENSACIG00000013116	-	74	43.426	ENSLBEG00000004576	-	89	43.426	Labrus_bergylta
ENSACIG00000013116	-	58	33.446	ENSLACG00000009240	-	100	33.446	Latimeria_chalumnae
ENSACIG00000013116	-	75	34.483	ENSLACG00000006357	-	95	34.483	Latimeria_chalumnae
ENSACIG00000013116	-	80	38.573	ENSLOCG00000017064	-	74	38.573	Lepisosteus_oculatus
ENSACIG00000013116	-	53	40.449	ENSLOCG00000002743	-	100	40.449	Lepisosteus_oculatus
ENSACIG00000013116	-	88	40.161	ENSLOCG00000011928	-	73	36.667	Lepisosteus_oculatus
ENSACIG00000013116	-	90	43.921	ENSMAMG00000019985	-	76	44.605	Mastacembelus_armatus
ENSACIG00000013116	-	88	47.235	ENSONIG00000020875	-	78	47.235	Oreochromis_niloticus
ENSACIG00000013116	-	91	38.730	ENSOMEG00000015368	-	87	38.836	Oryzias_melastigma
ENSACIG00000013116	-	61	40.931	ENSPMGG00000001593	-	63	40.931	Periophthalmus_magnuspinnatus
ENSACIG00000013116	-	85	38.232	ENSPMGG00000017392	-	92	38.232	Periophthalmus_magnuspinnatus
ENSACIG00000013116	-	85	39.723	ENSPLAG00000011817	-	85	39.954	Poecilia_latipinna
ENSACIG00000013116	-	88	41.538	ENSPLAG00000011810	-	84	41.538	Poecilia_latipinna
ENSACIG00000013116	-	88	42.042	ENSPLAG00000022994	-	85	41.868	Poecilia_latipinna
ENSACIG00000013116	-	81	42.410	ENSPLAG00000023379	-	98	42.410	Poecilia_latipinna
ENSACIG00000013116	-	90	37.621	ENSPMEG00000008574	-	85	37.621	Poecilia_mexicana
ENSACIG00000013116	-	85	41.494	ENSPMEG00000003431	-	82	41.590	Poecilia_mexicana
ENSACIG00000013116	-	85	41.014	ENSPREG00000012484	-	76	41.014	Poecilia_reticulata
ENSACIG00000013116	-	91	37.957	ENSPREG00000005756	-	84	37.957	Poecilia_reticulata
ENSACIG00000013116	-	90	38.105	ENSPREG00000005456	-	79	38.296	Poecilia_reticulata
ENSACIG00000013116	-	81	40.566	ENSPNAG00000003539	-	69	40.566	Pygocentrus_nattereri
ENSACIG00000013116	-	81	40.260	ENSPNAG00000016635	-	70	40.260	Pygocentrus_nattereri
ENSACIG00000013116	-	64	40.896	ENSPNAG00000017596	-	68	41.053	Pygocentrus_nattereri
ENSACIG00000013116	-	78	39.780	ENSPNAG00000021754	-	68	39.780	Pygocentrus_nattereri
ENSACIG00000013116	-	72	37.879	ENSPNAG00000014625	-	68	37.879	Pygocentrus_nattereri
ENSACIG00000013116	-	79	40.436	ENSPNAG00000007038	-	71	40.071	Pygocentrus_nattereri
ENSACIG00000013116	-	81	43.484	ENSXCOG00000008881	-	92	43.484	Xiphophorus_couchianus
ENSACIG00000013116	-	80	41.451	ENSXCOG00000013093	-	71	41.451	Xiphophorus_couchianus
ENSACIG00000013116	-	85	40.925	ENSXMAG00000028672	-	78	40.925	Xiphophorus_maculatus