EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000013317 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: zgc:153215
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2104 bases
Position: chrCCOE01000370.1:1134789-1136892
Accession: ZDB-GENE-061103-58
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000017087	RRM_1	PF00076.22	9.4e-22	1	2
ENSACIP00000017087	RRM_1	PF00076.22	9.4e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000017554	-	1470	-	ENSACIP00000017087	489 (aa)	-	-

Gene Model

Click here to download ENSACIG00000013317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000013317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000013317	zgc:153215	96	48.614	ENSAPOG00000008836	zgc:153215	93	48.614	Acanthochromis_polyacanthus
ENSACIG00000013317	zgc:153215	99	54.563	ENSAOCG00000010819	zgc:153215	98	54.563	Amphiprion_ocellaris
ENSACIG00000013317	zgc:153215	99	53.646	ENSATEG00000001886	zgc:153215	98	53.646	Anabas_testudineus
ENSACIG00000013317	zgc:153215	99	71.094	ENSACLG00000007675	zgc:153215	98	71.094	Astatotilapia_calliptera
ENSACIG00000013317	zgc:153215	54	51.250	ENSACLG00000005578	rbm12b	57	51.250	Astatotilapia_calliptera
ENSACIG00000013317	zgc:153215	99	32.780	ENSAMXG00000041973	rbm12b	73	30.080	Astyanax_mexicanus
ENSACIG00000013317	zgc:153215	86	58.025	ENSAMXG00000020853	zgc:153215	71	58.025	Astyanax_mexicanus
ENSACIG00000013317	zgc:153215	79	48.187	ENSCSEG00000001575	-	98	48.187	Cynoglossus_semilaevis
ENSACIG00000013317	zgc:153215	99	44.643	ENSCVAG00000009259	-	98	44.643	Cyprinodon_variegatus
ENSACIG00000013317	zgc:153215	99	39.114	ENSDARG00000055889	zgc:153215	98	38.536	Danio_rerio
ENSACIG00000013317	zgc:153215	69	34.615	ENSEBUG00000004292	-	60	34.615	Eptatretus_burgeri
ENSACIG00000013317	zgc:153215	99	40.893	ENSELUG00000009039	zgc:153215	96	41.071	Esox_lucius
ENSACIG00000013317	zgc:153215	99	43.685	ENSFHEG00000014539	zgc:153215	95	43.685	Fundulus_heteroclitus
ENSACIG00000013317	zgc:153215	99	30.250	ENSGMOG00000013467	rbm12b	73	30.250	Gadus_morhua
ENSACIG00000013317	zgc:153215	97	50.620	ENSGAFG00000007845	zgc:153215	96	50.620	Gambusia_affinis
ENSACIG00000013317	zgc:153215	99	30.140	ENSGACG00000008682	rbm12b	72	30.140	Gasterosteus_aculeatus
ENSACIG00000013317	zgc:153215	99	30.078	ENSGGOG00000011909	RBM12B	55	30.078	Gorilla_gorilla
ENSACIG00000013317	zgc:153215	99	66.667	ENSHBUG00000016150	zgc:153215	99	66.667	Haplochromis_burtoni
ENSACIG00000013317	zgc:153215	99	37.313	ENSIPUG00000019731	zgc:153215	98	37.313	Ictalurus_punctatus
ENSACIG00000013317	zgc:153215	99	47.750	ENSKMAG00000004958	zgc:153215	99	47.750	Kryptolebias_marmoratus
ENSACIG00000013317	zgc:153215	99	56.352	ENSLBEG00000002597	zgc:153215	97	57.172	Labrus_bergylta
ENSACIG00000013317	zgc:153215	99	31.214	ENSLOCG00000018344	rbm12b	73	31.081	Lepisosteus_oculatus
ENSACIG00000013317	zgc:153215	99	52.065	ENSMAMG00000012038	zgc:153215	98	52.065	Mastacembelus_armatus
ENSACIG00000013317	zgc:153215	99	66.312	ENSMZEG00005005435	zgc:153215	99	66.312	Maylandia_zebra
ENSACIG00000013317	zgc:153215	87	44.828	ENSMMOG00000002404	rbm12b	69	44.828	Mola_mola
ENSACIG00000013317	zgc:153215	97	55.556	ENSMMOG00000003372	zgc:153215	98	55.556	Mola_mola
ENSACIG00000013317	zgc:153215	99	30.588	ENSMODG00000007436	RBM12B	65	30.680	Monodelphis_domestica
ENSACIG00000013317	zgc:153215	99	56.762	ENSMALG00000001222	zgc:153215	97	56.762	Monopterus_albus
ENSACIG00000013317	zgc:153215	83	51.250	ENSMALG00000012059	rbm12b	65	51.250	Monopterus_albus
ENSACIG00000013317	zgc:153215	99	30.000	ENSMUSG00000046667	Rbm12b1	57	30.000	Mus_musculus
ENSACIG00000013317	zgc:153215	99	66.667	ENSNBRG00000013644	zgc:153215	99	66.667	Neolamprologus_brichardi
ENSACIG00000013317	zgc:153215	99	69.656	ENSONIG00000006054	zgc:153215	99	69.173	Oreochromis_niloticus
ENSACIG00000013317	zgc:153215	98	43.827	ENSOMEG00000004220	zgc:153215	94	45.473	Oryzias_melastigma
ENSACIG00000013317	zgc:153215	98	30.357	ENSPKIG00000018719	rbm12b	72	30.357	Paramormyrops_kingsleyae
ENSACIG00000013317	zgc:153215	99	36.893	ENSPKIG00000014851	zgc:153215	98	36.893	Paramormyrops_kingsleyae
ENSACIG00000013317	zgc:153215	99	30.648	ENSPCIG00000008556	RBM12B	66	30.709	Phascolarctos_cinereus
ENSACIG00000013317	zgc:153215	99	58.696	ENSPFOG00000017451	zgc:153215	83	58.696	Poecilia_formosa
ENSACIG00000013317	zgc:153215	99	47.942	ENSPLAG00000000232	zgc:153215	98	47.942	Poecilia_latipinna
ENSACIG00000013317	zgc:153215	99	48.765	ENSPMEG00000016662	zgc:153215	98	48.765	Poecilia_mexicana
ENSACIG00000013317	zgc:153215	99	51.230	ENSPREG00000018608	zgc:153215	98	51.230	Poecilia_reticulata
ENSACIG00000013317	zgc:153215	99	30.409	ENSPVAG00000011803	RBM12B	52	30.409	Pteropus_vampyrus
ENSACIG00000013317	zgc:153215	86	81.395	ENSPNYG00000018125	zgc:153215	96	81.395	Pundamilia_nyererei
ENSACIG00000013317	zgc:153215	84	59.259	ENSPNAG00000025628	zgc:153215	75	59.259	Pygocentrus_nattereri
ENSACIG00000013317	zgc:153215	99	30.648	ENSSHAG00000015335	RBM12B	66	30.709	Sarcophilus_harrisii
ENSACIG00000013317	zgc:153215	99	38.124	ENSSFOG00015009427	zgc:153215	98	38.124	Scleropages_formosus
ENSACIG00000013317	zgc:153215	99	30.392	ENSSFOG00015001584	rbm12b	73	30.392	Scleropages_formosus
ENSACIG00000013317	zgc:153215	99	53.267	ENSSMAG00000019013	zgc:153215	96	53.267	Scophthalmus_maximus
ENSACIG00000013317	zgc:153215	99	58.317	ENSSDUG00000012545	zgc:153215	97	57.968	Seriola_dumerili
ENSACIG00000013317	zgc:153215	99	54.688	ENSSLDG00000013581	zgc:153215	97	54.688	Seriola_lalandi_dorsalis
ENSACIG00000013317	zgc:153215	99	46.230	ENSSPAG00000023584	zgc:153215	97	46.825	Stegastes_partitus
ENSACIG00000013317	zgc:153215	79	49.364	ENSTNIG00000018374	-	98	49.873	Tetraodon_nigroviridis
ENSACIG00000013317	zgc:153215	99	51.423	ENSXCOG00000019654	zgc:153215	97	51.423	Xiphophorus_couchianus
ENSACIG00000013317	zgc:153215	99	40.854	ENSXMAG00000013169	-	96	40.854	Xiphophorus_maculatus