EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000013400 (Gene tree)
Gene ID: -
Gene Symbol: zgc:56699
Alias: -
Full Name: zgc:56699
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2282 bases
Position: chrCCOE01000667.1:1796256-1798537
Accession: ZDB-GENE-040426-2099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000017198	zf-U11-48K	PF05253.12	1e-15	1	2
ENSACIP00000017198	zf-U11-48K	PF05253.12	1e-15	2	2
ENSACIP00000017193	zf-U11-48K	PF05253.12	1.7e-15	1	2
ENSACIP00000017193	zf-U11-48K	PF05253.12	1.7e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000017663	-	531	-	ENSACIP00000017193	176 (aa)	-	-
ENSACIT00000017668	-	438	-	ENSACIP00000017198	145 (aa)	-	-

Gene Model

Click here to download ENSACIG00000013400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000013400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000013400	zgc:56699	80	67.857	ENSAPOG00000000311	-	79	67.857	Acanthochromis_polyacanthus
ENSACIG00000013400	zgc:56699	96	56.069	ENSAPOG00000021951	-	97	56.069	Acanthochromis_polyacanthus
ENSACIG00000013400	zgc:56699	96	59.538	ENSAOCG00000013650	-	97	59.538	Amphiprion_ocellaris
ENSACIG00000013400	zgc:56699	95	58.042	ENSAPEG00000006689	zgc:56699	96	58.042	Amphiprion_percula
ENSACIG00000013400	zgc:56699	99	70.391	ENSATEG00000024058	zgc:56699	99	70.391	Anabas_testudineus
ENSACIG00000013400	zgc:56699	99	72.778	ENSACLG00000023562	zgc:56699	92	72.778	Astatotilapia_calliptera
ENSACIG00000013400	zgc:56699	85	48.387	ENSAMXG00000036095	-	65	48.387	Astyanax_mexicanus
ENSACIG00000013400	zgc:56699	97	50.273	ENSAMXG00000038346	zgc:56699	99	50.273	Astyanax_mexicanus
ENSACIG00000013400	zgc:56699	97	64.000	ENSCSEG00000021520	zgc:56699	83	64.000	Cynoglossus_semilaevis
ENSACIG00000013400	zgc:56699	84	58.503	ENSCVAG00000009972	zgc:56699	77	58.503	Cyprinodon_variegatus
ENSACIG00000013400	zgc:56699	86	52.597	ENSDARG00000000887	zgc:56699	84	52.597	Danio_rerio
ENSACIG00000013400	zgc:56699	89	48.148	ENSDARG00000099586	CR382383.2	88	48.148	Danio_rerio
ENSACIG00000013400	zgc:56699	81	36.986	ENSEBUG00000005577	-	72	36.986	Eptatretus_burgeri
ENSACIG00000013400	zgc:56699	79	33.813	ENSEBUG00000000411	-	75	33.813	Eptatretus_burgeri
ENSACIG00000013400	zgc:56699	82	62.838	ENSELUG00000003242	gtsf1	81	62.838	Esox_lucius
ENSACIG00000013400	zgc:56699	97	66.857	ENSFHEG00000006036	zgc:56699	97	65.306	Fundulus_heteroclitus
ENSACIG00000013400	zgc:56699	80	63.333	ENSGMOG00000007295	zgc:56699	99	63.333	Gadus_morhua
ENSACIG00000013400	zgc:56699	74	41.481	ENSGALG00000035365	-	77	41.481	Gallus_gallus
ENSACIG00000013400	zgc:56699	99	68.715	ENSGAFG00000020743	zgc:56699	99	68.715	Gambusia_affinis
ENSACIG00000013400	zgc:56699	99	72.222	ENSHBUG00000005327	zgc:56699	100	72.222	Haplochromis_burtoni
ENSACIG00000013400	zgc:56699	96	46.857	ENSHCOG00000010296	-	99	46.857	Hippocampus_comes
ENSACIG00000013400	zgc:56699	96	46.591	ENSIPUG00000011498	zgc:56699	95	46.591	Ictalurus_punctatus
ENSACIG00000013400	zgc:56699	97	72.340	ENSLBEG00000015981	zgc:56699	100	72.340	Labrus_bergylta
ENSACIG00000013400	zgc:56699	80	47.887	ENSLOCG00000004469	zgc:56699	97	47.887	Lepisosteus_oculatus
ENSACIG00000013400	zgc:56699	99	59.091	ENSMAMG00000001846	zgc:56699	99	59.091	Mastacembelus_armatus
ENSACIG00000013400	zgc:56699	99	72.778	ENSMZEG00005026479	zgc:56699	92	72.778	Maylandia_zebra
ENSACIG00000013400	zgc:56699	86	58.940	ENSMMOG00000017331	zgc:56699	80	58.940	Mola_mola
ENSACIG00000013400	zgc:56699	99	72.222	ENSNBRG00000006336	zgc:56699	100	72.222	Neolamprologus_brichardi
ENSACIG00000013400	zgc:56699	99	73.333	ENSONIG00000016720	zgc:56699	92	73.333	Oreochromis_niloticus
ENSACIG00000013400	zgc:56699	63	39.496	ENSOANG00000030381	-	74	39.496	Ornithorhynchus_anatinus
ENSACIG00000013400	zgc:56699	100	51.685	ENSORLG00000015258	-	100	51.685	Oryzias_latipes
ENSACIG00000013400	zgc:56699	79	60.563	ENSORLG00000025877	-	87	60.563	Oryzias_latipes
ENSACIG00000013400	zgc:56699	79	60.563	ENSORLG00020011013	-	87	60.563	Oryzias_latipes_hni
ENSACIG00000013400	zgc:56699	100	51.685	ENSORLG00020010990	-	100	51.685	Oryzias_latipes_hni
ENSACIG00000013400	zgc:56699	100	52.809	ENSORLG00015004961	zgc:56699	100	52.809	Oryzias_latipes_hsok
ENSACIG00000013400	zgc:56699	86	50.806	ENSOMEG00000013200	-	92	54.610	Oryzias_melastigma
ENSACIG00000013400	zgc:56699	100	52.841	ENSOMEG00000021739	-	100	52.841	Oryzias_melastigma
ENSACIG00000013400	zgc:56699	99	54.494	ENSOMEG00000021773	-	99	54.494	Oryzias_melastigma
ENSACIG00000013400	zgc:56699	84	53.289	ENSPKIG00000017039	zgc:56699	84	53.289	Paramormyrops_kingsleyae
ENSACIG00000013400	zgc:56699	94	65.734	ENSPMGG00000023241	zgc:56699	95	65.734	Periophthalmus_magnuspinnatus
ENSACIG00000013400	zgc:56699	64	41.667	ENSPMAG00000009653	-	93	41.667	Petromyzon_marinus
ENSACIG00000013400	zgc:56699	52	35.526	ENSPCIG00000006734	-	95	35.526	Phascolarctos_cinereus
ENSACIG00000013400	zgc:56699	99	68.715	ENSPFOG00000009204	zgc:56699	99	68.715	Poecilia_formosa
ENSACIG00000013400	zgc:56699	99	68.212	ENSPLAG00000009088	zgc:56699	99	68.212	Poecilia_latipinna
ENSACIG00000013400	zgc:56699	99	68.715	ENSPMEG00000001443	zgc:56699	99	68.715	Poecilia_mexicana
ENSACIG00000013400	zgc:56699	99	71.429	ENSPREG00000000745	zgc:56699	99	71.429	Poecilia_reticulata
ENSACIG00000013400	zgc:56699	99	72.778	ENSPNYG00000002811	zgc:56699	100	72.778	Pundamilia_nyererei
ENSACIG00000013400	zgc:56699	96	54.494	ENSPNAG00000005165	zgc:56699	98	54.494	Pygocentrus_nattereri
ENSACIG00000013400	zgc:56699	86	50.980	ENSSFOG00015021600	zgc:56699	85	50.980	Scleropages_formosus
ENSACIG00000013400	zgc:56699	100	62.570	ENSSMAG00000020886	zgc:56699	100	62.570	Scophthalmus_maximus
ENSACIG00000013400	zgc:56699	99	67.598	ENSSDUG00000002033	zgc:56699	99	67.598	Seriola_dumerili
ENSACIG00000013400	zgc:56699	99	67.598	ENSSLDG00000014113	zgc:56699	99	67.598	Seriola_lalandi_dorsalis
ENSACIG00000013400	zgc:56699	80	58.784	ENSSPAG00000010005	-	94	58.784	Stegastes_partitus
ENSACIG00000013400	zgc:56699	95	65.734	ENSSPAG00000019854	-	98	65.294	Stegastes_partitus
ENSACIG00000013400	zgc:56699	97	54.857	ENSTRUG00000015537	zgc:56699	98	54.857	Takifugu_rubripes
ENSACIG00000013400	zgc:56699	81	61.379	ENSTNIG00000012515	zgc:56699	97	61.379	Tetraodon_nigroviridis
ENSACIG00000013400	zgc:56699	97	64.943	ENSXCOG00000014400	zgc:56699	87	64.943	Xiphophorus_couchianus
ENSACIG00000013400	zgc:56699	97	68.571	ENSXMAG00000011692	zgc:56699	98	68.571	Xiphophorus_maculatus