EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000013747 (Gene tree)
Gene ID: -
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 56
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 18421 bases
Position: chrCCOE01001389.1:434081-452501
Accession: ZDB-GENE-040825-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000017635	ResIII	PF04851.15	5.6e-07	1	1
ENSACIP00000017689	ResIII	PF04851.15	8.8e-07	1	1
ENSACIP00000017689	DEAD	PF00270.29	1.3e-38	1	1
ENSACIP00000017635	DEAD	PF00270.29	2.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000018111	-	555	-	ENSACIP00000017635	184 (aa)	-	-
ENSACIT00000018165	-	1548	-	ENSACIP00000017689	515 (aa)	-	-

Gene Model

Click here to download ENSACIG00000013747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000013747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000013747	ddx56	97	37.430	ENSACIG00000014378	ddx27	97	36.735
ENSACIG00000013747	ddx56	52	43.548	ENSACIG00000001068	-	55	43.548
ENSACIG00000013747	ddx56	95	39.205	ENSACIG00000022802	ddx47	54	42.623
ENSACIG00000013747	ddx56	96	36.313	ENSACIG00000011029	ddx49	78	31.671
ENSACIG00000013747	ddx56	82	32.237	ENSACIG00000006033	ddx31	64	33.846
ENSACIG00000013747	ddx56	92	34.706	ENSACIG00000018534	ddx18	60	30.500
ENSACIG00000013747	ddx56	80	35.135	ENSACIG00000014917	-	89	34.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000013747	ddx56	98	66.667	ENSG00000136271	DDX56	98	67.403	Homo_sapiens
ENSACIG00000013747	ddx56	99	86.885	ENSAPOG00000017113	ddx56	99	72.983	Acanthochromis_polyacanthus
ENSACIG00000013747	ddx56	98	66.298	ENSAMEG00000017711	DDX56	92	59.369	Ailuropoda_melanoleuca
ENSACIG00000013747	ddx56	99	86.813	ENSAOCG00000015447	-	87	74.642	Amphiprion_ocellaris
ENSACIG00000013747	ddx56	99	86.813	ENSAOCG00000018059	ddx56	94	75.100	Amphiprion_ocellaris
ENSACIG00000013747	ddx56	99	86.339	ENSAPEG00000007267	ddx56	95	73.970	Amphiprion_percula
ENSACIG00000013747	ddx56	99	84.699	ENSATEG00000005279	ddx56	96	75.830	Anabas_testudineus
ENSACIG00000013747	ddx56	99	90.710	ENSACLG00000020113	ddx56	95	77.715	Astatotilapia_calliptera
ENSACIG00000013747	ddx56	99	79.121	ENSAMXG00000019357	ddx56	96	65.863	Astyanax_mexicanus
ENSACIG00000013747	ddx56	98	66.484	ENSBTAG00000010602	DDX56	92	60.511	Bos_taurus
ENSACIG00000013747	ddx56	98	35.897	WBGene00016073	C24H12.4	85	34.854	Caenorhabditis_elegans
ENSACIG00000013747	ddx56	98	66.120	ENSCJAG00000012233	DDX56	92	60.196	Callithrix_jacchus
ENSACIG00000013747	ddx56	75	56.934	ENSCAFG00000029295	DDX56	91	56.934	Canis_familiaris
ENSACIG00000013747	ddx56	98	65.193	ENSCAFG00020019695	DDX56	92	58.468	Canis_lupus_dingo
ENSACIG00000013747	ddx56	98	67.033	ENSCHIG00000014261	DDX56	92	60.511	Capra_hircus
ENSACIG00000013747	ddx56	98	65.385	ENSTSYG00000008048	DDX56	92	59.725	Carlito_syrichta
ENSACIG00000013747	ddx56	85	57.792	ENSCAPG00000006286	DDX56	91	59.770	Cavia_aperea
ENSACIG00000013747	ddx56	98	68.681	ENSCPOG00000003359	DDX56	92	61.417	Cavia_porcellus
ENSACIG00000013747	ddx56	98	64.481	ENSCCAG00000025303	DDX56	92	58.824	Cebus_capucinus
ENSACIG00000013747	ddx56	98	65.574	ENSCATG00000039389	DDX56	92	60.000	Cercocebus_atys
ENSACIG00000013747	ddx56	98	68.132	ENSCLAG00000007666	DDX56	92	60.433	Chinchilla_lanigera
ENSACIG00000013747	ddx56	98	65.574	ENSCSAG00000015636	DDX56	92	60.000	Chlorocebus_sabaeus
ENSACIG00000013747	ddx56	96	74.011	ENSCPBG00000024556	DDX56	95	61.423	Chrysemys_picta_bellii
ENSACIG00000013747	ddx56	97	59.890	ENSCING00000005185	-	98	53.516	Ciona_intestinalis
ENSACIG00000013747	ddx56	99	59.563	ENSCSAVG00000011266	-	99	52.988	Ciona_savignyi
ENSACIG00000013747	ddx56	98	65.574	ENSCANG00000028187	DDX56	92	60.000	Colobus_angolensis_palliatus
ENSACIG00000013747	ddx56	98	67.956	ENSCGRG00001019019	Ddx56	92	60.672	Cricetulus_griseus_chok1gshd
ENSACIG00000013747	ddx56	98	67.956	ENSCGRG00000011870	Ddx56	92	60.672	Cricetulus_griseus_crigri
ENSACIG00000013747	ddx56	99	84.699	ENSCSEG00000008368	ddx56	95	71.776	Cynoglossus_semilaevis
ENSACIG00000013747	ddx56	99	88.525	ENSCVAG00000006499	ddx56	95	72.180	Cyprinodon_variegatus
ENSACIG00000013747	ddx56	99	78.689	ENSDARG00000020913	ddx56	95	69.346	Danio_rerio
ENSACIG00000013747	ddx56	83	56.674	ENSDNOG00000036526	DDX56	90	58.028	Dasypus_novemcinctus
ENSACIG00000013747	ddx56	98	66.851	ENSDORG00000026173	-	98	66.851	Dipodomys_ordii
ENSACIG00000013747	ddx56	99	52.717	FBgn0001565	Hlc	90	45.825	Drosophila_melanogaster
ENSACIG00000013747	ddx56	89	51.220	ENSETEG00000019559	-	99	43.077	Echinops_telfairi
ENSACIG00000013747	ddx56	70	73.214	ENSETEG00000002969	-	64	70.833	Echinops_telfairi
ENSACIG00000013747	ddx56	97	68.156	ENSEBUG00000009986	ddx56	96	57.692	Eptatretus_burgeri
ENSACIG00000013747	ddx56	98	66.298	ENSEASG00005017795	DDX56	92	59.332	Equus_asinus_asinus
ENSACIG00000013747	ddx56	98	65.746	ENSECAG00000019897	DDX56	92	59.136	Equus_caballus
ENSACIG00000013747	ddx56	81	57.240	ENSEEUG00000004849	DDX56	91	57.373	Erinaceus_europaeus
ENSACIG00000013747	ddx56	99	80.328	ENSELUG00000004150	ddx56	95	71.161	Esox_lucius
ENSACIG00000013747	ddx56	98	66.298	ENSFCAG00000010261	DDX56	92	59.172	Felis_catus
ENSACIG00000013747	ddx56	98	65.934	ENSFDAG00000007128	DDX56	92	59.843	Fukomys_damarensis
ENSACIG00000013747	ddx56	99	87.432	ENSFHEG00000018008	ddx56	98	72.584	Fundulus_heteroclitus
ENSACIG00000013747	ddx56	99	87.978	ENSGAFG00000006906	ddx56	93	70.101	Gambusia_affinis
ENSACIG00000013747	ddx56	95	72.727	ENSGAGG00000006789	DDX56	93	61.714	Gopherus_agassizii
ENSACIG00000013747	ddx56	98	66.120	ENSGGOG00000012031	DDX56	92	60.000	Gorilla_gorilla
ENSACIG00000013747	ddx56	99	91.209	ENSHBUG00000015246	ddx56	97	72.305	Haplochromis_burtoni
ENSACIG00000013747	ddx56	97	65.746	ENSHGLG00000017271	DDX56	92	59.566	Heterocephalus_glaber_female
ENSACIG00000013747	ddx56	97	65.746	ENSHGLG00100015731	DDX56	92	59.566	Heterocephalus_glaber_male
ENSACIG00000013747	ddx56	100	85.326	ENSHCOG00000001685	ddx56	96	71.161	Hippocampus_comes
ENSACIG00000013747	ddx56	99	74.863	ENSIPUG00000006602	ddx56	94	64.935	Ictalurus_punctatus
ENSACIG00000013747	ddx56	98	68.132	ENSSTOG00000000464	DDX56	92	60.511	Ictidomys_tridecemlineatus
ENSACIG00000013747	ddx56	98	66.851	ENSJJAG00000014269	Ddx56	93	59.763	Jaculus_jaculus
ENSACIG00000013747	ddx56	99	84.615	ENSKMAG00000016611	ddx56	96	73.000	Kryptolebias_marmoratus
ENSACIG00000013747	ddx56	99	85.246	ENSLBEG00000026281	ddx56	96	74.164	Labrus_bergylta
ENSACIG00000013747	ddx56	96	75.141	ENSLACG00000015551	DDX56	93	64.962	Latimeria_chalumnae
ENSACIG00000013747	ddx56	99	79.121	ENSLOCG00000015185	ddx56	96	66.851	Lepisosteus_oculatus
ENSACIG00000013747	ddx56	99	64.865	ENSLAFG00000018206	DDX56	93	58.984	Loxodonta_africana
ENSACIG00000013747	ddx56	98	65.574	ENSMFAG00000041001	DDX56	92	60.000	Macaca_fascicularis
ENSACIG00000013747	ddx56	98	65.574	ENSMMUG00000002645	DDX56	92	60.000	Macaca_mulatta
ENSACIG00000013747	ddx56	98	65.574	ENSMNEG00000028492	DDX56	92	59.804	Macaca_nemestrina
ENSACIG00000013747	ddx56	98	65.574	ENSMLEG00000043591	DDX56	92	60.000	Mandrillus_leucophaeus
ENSACIG00000013747	ddx56	99	86.339	ENSMAMG00000007776	ddx56	95	74.953	Mastacembelus_armatus
ENSACIG00000013747	ddx56	99	90.710	ENSMZEG00005009813	ddx56	95	77.715	Maylandia_zebra
ENSACIG00000013747	ddx56	98	66.484	ENSMICG00000005550	DDX56	92	59.725	Microcebus_murinus
ENSACIG00000013747	ddx56	98	66.851	ENSMOCG00000016782	Ddx56	92	58.546	Microtus_ochrogaster
ENSACIG00000013747	ddx56	99	85.792	ENSMMOG00000009654	ddx56	95	73.506	Mola_mola
ENSACIG00000013747	ddx56	95	53.950	ENSMODG00000016137	DDX56	91	54.012	Monodelphis_domestica
ENSACIG00000013747	ddx56	99	81.720	ENSMALG00000016910	ddx56	99	65.000	Monopterus_albus
ENSACIG00000013747	ddx56	98	67.403	MGP_CAROLIEiJ_G0016069	Ddx56	92	58.974	Mus_caroli
ENSACIG00000013747	ddx56	98	67.403	ENSMUSG00000004393	Ddx56	92	58.546	Mus_musculus
ENSACIG00000013747	ddx56	98	67.403	MGP_PahariEiJ_G0016822	Ddx56	92	59.763	Mus_pahari
ENSACIG00000013747	ddx56	98	67.403	MGP_SPRETEiJ_G0016911	Ddx56	92	58.546	Mus_spretus
ENSACIG00000013747	ddx56	97	66.667	ENSMPUG00000018196	DDX56	81	59.055	Mustela_putorius_furo
ENSACIG00000013747	ddx56	98	64.835	ENSMLUG00000003509	DDX56	92	58.546	Myotis_lucifugus
ENSACIG00000013747	ddx56	98	69.231	ENSNGAG00000018785	Ddx56	92	61.220	Nannospalax_galili
ENSACIG00000013747	ddx56	99	90.710	ENSNBRG00000002656	ddx56	97	75.624	Neolamprologus_brichardi
ENSACIG00000013747	ddx56	98	66.120	ENSNLEG00000003816	DDX56	92	60.630	Nomascus_leucogenys
ENSACIG00000013747	ddx56	98	67.582	ENSMEUG00000006788	DDX56	99	53.119	Notamacropus_eugenii
ENSACIG00000013747	ddx56	97	65.363	ENSOPRG00000000292	-	91	58.103	Ochotona_princeps
ENSACIG00000013747	ddx56	98	68.132	ENSODEG00000014807	DDX56	99	57.067	Octodon_degus
ENSACIG00000013747	ddx56	99	90.164	ENSONIG00000011509	ddx56	96	76.190	Oreochromis_niloticus
ENSACIG00000013747	ddx56	98	56.593	ENSOANG00000015987	-	94	48.020	Ornithorhynchus_anatinus
ENSACIG00000013747	ddx56	89	67.879	ENSOANG00000006320	-	92	50.505	Ornithorhynchus_anatinus
ENSACIG00000013747	ddx56	59	56.881	ENSOANG00000020827	-	100	56.881	Ornithorhynchus_anatinus
ENSACIG00000013747	ddx56	97	67.039	ENSOCUG00000022918	DDX56	92	59.604	Oryctolagus_cuniculus
ENSACIG00000013747	ddx56	99	81.868	ENSORLG00000001434	ddx56	95	70.654	Oryzias_latipes
ENSACIG00000013747	ddx56	100	82.065	ENSORLG00020015718	ddx56	92	70.841	Oryzias_latipes_hni
ENSACIG00000013747	ddx56	99	81.967	ENSORLG00015003004	ddx56	91	70.654	Oryzias_latipes_hsok
ENSACIG00000013747	ddx56	99	82.514	ENSOMEG00000022072	ddx56	95	70.841	Oryzias_melastigma
ENSACIG00000013747	ddx56	98	67.582	ENSOGAG00000009981	DDX56	92	59.725	Otolemur_garnettii
ENSACIG00000013747	ddx56	98	67.033	ENSOARG00000015240	DDX56	95	58.129	Ovis_aries
ENSACIG00000013747	ddx56	96	48.566	ENSPPAG00000031263	-	92	48.638	Pan_paniscus
ENSACIG00000013747	ddx56	94	64.000	ENSPPAG00000029147	DDX56	92	57.225	Pan_paniscus
ENSACIG00000013747	ddx56	98	66.298	ENSPPRG00000014594	DDX56	92	58.580	Panthera_pardus
ENSACIG00000013747	ddx56	79	56.552	ENSPTIG00000019500	DDX56	84	56.481	Panthera_tigris_altaica
ENSACIG00000013747	ddx56	98	66.120	ENSPTRG00000019147	DDX56	92	60.000	Pan_troglodytes
ENSACIG00000013747	ddx56	89	49.388	ENSPTRG00000052765	-	92	49.794	Pan_troglodytes
ENSACIG00000013747	ddx56	98	65.574	ENSPANG00000002446	DDX56	92	59.804	Papio_anubis
ENSACIG00000013747	ddx56	99	81.967	ENSPKIG00000018998	ddx56	95	69.101	Paramormyrops_kingsleyae
ENSACIG00000013747	ddx56	99	84.699	ENSPMGG00000017421	ddx56	99	72.812	Periophthalmus_magnuspinnatus
ENSACIG00000013747	ddx56	97	62.011	ENSPEMG00000018351	-	82	66.190	Peromyscus_maniculatus_bairdii
ENSACIG00000013747	ddx56	99	67.760	ENSPCIG00000009336	DDX56	91	60.665	Phascolarctos_cinereus
ENSACIG00000013747	ddx56	99	89.011	ENSPFOG00000018658	ddx56	95	73.684	Poecilia_formosa
ENSACIG00000013747	ddx56	99	89.011	ENSPLAG00000019208	ddx56	95	73.684	Poecilia_latipinna
ENSACIG00000013747	ddx56	99	89.011	ENSPMEG00000001775	ddx56	95	73.684	Poecilia_mexicana
ENSACIG00000013747	ddx56	99	89.071	ENSPREG00000015142	ddx56	95	73.872	Poecilia_reticulata
ENSACIG00000013747	ddx56	98	66.120	ENSPPYG00000017591	DDX56	92	60.196	Pongo_abelii
ENSACIG00000013747	ddx56	89	65.663	ENSPCAG00000011499	DDX56	92	58.621	Procavia_capensis
ENSACIG00000013747	ddx56	98	66.484	ENSPCOG00000024864	DDX56	92	60.118	Propithecus_coquereli
ENSACIG00000013747	ddx56	98	64.641	ENSPVAG00000000791	DDX56	79	68.246	Pteropus_vampyrus
ENSACIG00000013747	ddx56	99	90.164	ENSPNYG00000019212	ddx56	95	77.528	Pundamilia_nyererei
ENSACIG00000013747	ddx56	99	79.235	ENSPNAG00000025446	ddx56	98	67.468	Pygocentrus_nattereri
ENSACIG00000013747	ddx56	98	66.851	ENSRNOG00000004670	Ddx56	92	59.566	Rattus_norvegicus
ENSACIG00000013747	ddx56	98	65.574	ENSRBIG00000030140	DDX56	92	60.196	Rhinopithecus_bieti
ENSACIG00000013747	ddx56	98	65.027	ENSRROG00000044428	DDX56	92	60.000	Rhinopithecus_roxellana
ENSACIG00000013747	ddx56	95	46.067	YLR276C	-	90	40.782	Saccharomyces_cerevisiae
ENSACIG00000013747	ddx56	98	64.481	ENSSBOG00000034339	DDX56	92	59.608	Saimiri_boliviensis_boliviensis
ENSACIG00000013747	ddx56	81	59.459	ENSSHAG00000016615	DDX56	90	59.633	Sarcophilus_harrisii
ENSACIG00000013747	ddx56	99	79.670	ENSSFOG00015012795	ddx56	94	67.041	Scleropages_formosus
ENSACIG00000013747	ddx56	99	86.413	ENSSMAG00000011280	ddx56	99	75.556	Scophthalmus_maximus
ENSACIG00000013747	ddx56	99	87.432	ENSSDUG00000023597	ddx56	95	76.536	Seriola_dumerili
ENSACIG00000013747	ddx56	99	86.885	ENSSLDG00000018369	ddx56	95	76.164	Seriola_lalandi_dorsalis
ENSACIG00000013747	ddx56	70	74.138	ENSSARG00000014363	DDX56	72	69.565	Sorex_araneus
ENSACIG00000013747	ddx56	99	71.739	ENSSPUG00000000784	DDX56	89	62.167	Sphenodon_punctatus
ENSACIG00000013747	ddx56	99	87.432	ENSSPAG00000009392	ddx56	99	75.881	Stegastes_partitus
ENSACIG00000013747	ddx56	98	65.746	ENSSSCG00000016745	DDX56	92	59.332	Sus_scrofa
ENSACIG00000013747	ddx56	100	85.870	ENSTRUG00000018623	ddx56	95	70.240	Takifugu_rubripes
ENSACIG00000013747	ddx56	99	86.885	ENSTNIG00000013593	ddx56	96	70.534	Tetraodon_nigroviridis
ENSACIG00000013747	ddx56	98	64.286	ENSTBEG00000007119	DDX56	92	59.608	Tupaia_belangeri
ENSACIG00000013747	ddx56	79	58.391	ENSTTRG00000010552	DDX56	91	58.295	Tursiops_truncatus
ENSACIG00000013747	ddx56	98	66.851	ENSUAMG00000014194	DDX56	92	59.566	Ursus_americanus
ENSACIG00000013747	ddx56	98	66.851	ENSUMAG00000009666	DDX56	92	59.566	Ursus_maritimus
ENSACIG00000013747	ddx56	98	65.193	ENSVVUG00000011905	DDX56	92	58.974	Vulpes_vulpes
ENSACIG00000013747	ddx56	97	71.348	ENSXETG00000019000	ddx56	91	65.600	Xenopus_tropicalis
ENSACIG00000013747	ddx56	99	89.011	ENSXCOG00000017413	ddx56	92	73.939	Xiphophorus_couchianus
ENSACIG00000013747	ddx56	99	89.011	ENSXMAG00000018749	ddx56	95	72.744	Xiphophorus_maculatus