EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000013752 (Gene tree)
Gene ID: -
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 14947 bases
Position: chrCCOE01001526.1:1016458-1031404
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000017677	Val_tRNA-synt_C	PF10458.9	1.3e-05	1	1
ENSACIP00000017677	tRNA-synt_1g	PF09334.11	4e-13	1	1
ENSACIP00000017677	Anticodon_1	PF08264.13	3.2e-36	1	1
ENSACIP00000017677	tRNA-synt_1	PF00133.22	4.2e-206	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000018153	-	3753	-	ENSACIP00000017677	1250 (aa)	-	-

Gene Model

Click here to download ENSACIG00000013752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000013752's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000013752	vars	81	48.269	ENSACIG00000004344	vars2	94	49.402

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000013752	vars	100	65.330	ENSG00000204394	VARS	99	73.313	Homo_sapiens
ENSACIG00000013752	vars	98	88.374	ENSAPOG00000020691	vars	99	88.374	Acanthochromis_polyacanthus
ENSACIG00000013752	vars	98	88.374	ENSAPOG00000020921	vars	99	88.374	Acanthochromis_polyacanthus
ENSACIG00000013752	vars	100	65.515	ENSAMEG00000006417	VARS	100	65.571	Ailuropoda_melanoleuca
ENSACIG00000013752	vars	100	91.059	ENSAOCG00000002447	vars	100	90.685	Amphiprion_ocellaris
ENSACIG00000013752	vars	100	91.137	ENSAPEG00000010638	vars	99	91.137	Amphiprion_percula
ENSACIG00000013752	vars	100	88.278	ENSATEG00000020219	vars	100	88.278	Anabas_testudineus
ENSACIG00000013752	vars	90	70.808	ENSACAG00000029133	-	99	70.808	Anolis_carolinensis
ENSACIG00000013752	vars	100	65.173	ENSANAG00000015453	VARS	100	65.412	Aotus_nancymaae
ENSACIG00000013752	vars	100	93.427	ENSACLG00000025699	vars	97	93.427	Astatotilapia_calliptera
ENSACIG00000013752	vars	96	81.750	ENSAMXG00000017716	vars	96	81.818	Astyanax_mexicanus
ENSACIG00000013752	vars	100	65.723	ENSBTAG00000005631	VARS	100	65.961	Bos_taurus
ENSACIG00000013752	vars	100	65.016	ENSCJAG00000002604	VARS	100	65.255	Callithrix_jacchus
ENSACIG00000013752	vars	100	65.306	ENSCAFG00000000636	VARS	100	65.364	Canis_familiaris
ENSACIG00000013752	vars	94	66.583	ENSCAFG00020020790	VARS	96	66.639	Canis_lupus_dingo
ENSACIG00000013752	vars	100	65.566	ENSCHIG00000011008	VARS	100	65.804	Capra_hircus
ENSACIG00000013752	vars	100	65.228	ENSTSYG00000001567	VARS	100	65.466	Carlito_syrichta
ENSACIG00000013752	vars	91	68.380	ENSCAPG00000013736	VARS	98	68.233	Cavia_aperea
ENSACIG00000013752	vars	100	64.734	ENSCPOG00000000870	VARS	100	64.448	Cavia_porcellus
ENSACIG00000013752	vars	100	65.228	ENSCCAG00000035656	VARS	100	65.463	Cebus_capucinus
ENSACIG00000013752	vars	100	65.569	ENSCATG00000022394	VARS	100	65.882	Cercocebus_atys
ENSACIG00000013752	vars	92	64.628	ENSCLAG00000009470	VARS	97	64.492	Chinchilla_lanigera
ENSACIG00000013752	vars	100	65.333	ENSCSAG00000008784	VARS	100	65.647	Chlorocebus_sabaeus
ENSACIG00000013752	vars	79	73.631	ENSCPBG00000007943	VARS	96	74.131	Chrysemys_picta_bellii
ENSACIG00000013752	vars	100	65.490	ENSCANG00000033570	VARS	100	65.804	Colobus_angolensis_palliatus
ENSACIG00000013752	vars	100	65.094	ENSCGRG00001005686	Vars	100	65.412	Cricetulus_griseus_chok1gshd
ENSACIG00000013752	vars	93	63.311	ENSCGRG00000013352	Vars	78	63.651	Cricetulus_griseus_crigri
ENSACIG00000013752	vars	100	84.382	ENSCSEG00000019652	vars	100	84.382	Cynoglossus_semilaevis
ENSACIG00000013752	vars	100	90.376	ENSCVAG00000022398	vars	100	90.376	Cyprinodon_variegatus
ENSACIG00000013752	vars	100	83.034	ENSDARG00000044575	vars	100	83.034	Danio_rerio
ENSACIG00000013752	vars	84	70.388	ENSDORG00000016433	Vars	94	70.472	Dipodomys_ordii
ENSACIG00000013752	vars	68	74.141	ENSETEG00000003824	VARS	77	74.141	Echinops_telfairi
ENSACIG00000013752	vars	58	66.347	ENSEBUG00000004637	vars	100	66.347	Eptatretus_burgeri
ENSACIG00000013752	vars	53	74.177	ENSEBUG00000007086	vars	83	74.177	Eptatretus_burgeri
ENSACIG00000013752	vars	100	65.566	ENSEASG00005015673	VARS	100	65.804	Equus_asinus_asinus
ENSACIG00000013752	vars	100	65.357	ENSECAG00000014620	VARS	100	65.517	Equus_caballus
ENSACIG00000013752	vars	72	71.178	ENSEEUG00000004116	VARS	73	71.178	Erinaceus_europaeus
ENSACIG00000013752	vars	100	83.476	ENSELUG00000006550	vars	97	83.476	Esox_lucius
ENSACIG00000013752	vars	100	65.566	ENSFCAG00000004510	VARS	100	65.725	Felis_catus
ENSACIG00000013752	vars	82	71.808	ENSFDAG00000011401	VARS	100	71.429	Fukomys_damarensis
ENSACIG00000013752	vars	100	88.341	ENSFHEG00000010672	vars	100	88.498	Fundulus_heteroclitus
ENSACIG00000013752	vars	100	80.560	ENSGMOG00000014908	vars	100	80.560	Gadus_morhua
ENSACIG00000013752	vars	100	89.812	ENSGAFG00000021630	vars	100	89.812	Gambusia_affinis
ENSACIG00000013752	vars	93	88.852	ENSGACG00000009601	vars	99	88.182	Gasterosteus_aculeatus
ENSACIG00000013752	vars	100	65.412	ENSGGOG00000011364	VARS	100	65.725	Gorilla_gorilla
ENSACIG00000013752	vars	100	93.349	ENSHBUG00000017151	vars	97	93.349	Haplochromis_burtoni
ENSACIG00000013752	vars	100	65.067	ENSHGLG00000011646	VARS	100	65.067	Heterocephalus_glaber_female
ENSACIG00000013752	vars	93	61.948	ENSHGLG00100018062	VARS	99	61.699	Heterocephalus_glaber_male
ENSACIG00000013752	vars	99	84.754	ENSHCOG00000012198	vars	99	84.754	Hippocampus_comes
ENSACIG00000013752	vars	100	82.330	ENSIPUG00000005218	vars	100	82.408	Ictalurus_punctatus
ENSACIG00000013752	vars	100	65.515	ENSSTOG00000013112	VARS	100	65.439	Ictidomys_tridecemlineatus
ENSACIG00000013752	vars	100	65.043	ENSJJAG00000019749	-	100	64.803	Jaculus_jaculus
ENSACIG00000013752	vars	100	53.591	ENSJJAG00000015343	-	100	53.639	Jaculus_jaculus
ENSACIG00000013752	vars	100	88.016	ENSKMAG00000009455	vars	100	88.016	Kryptolebias_marmoratus
ENSACIG00000013752	vars	100	92.426	ENSLBEG00000010341	vars	100	87.959	Labrus_bergylta
ENSACIG00000013752	vars	94	66.174	ENSLACG00000015232	VARS	99	66.366	Latimeria_chalumnae
ENSACIG00000013752	vars	100	74.824	ENSLOCG00000004240	vars	100	75.059	Lepisosteus_oculatus
ENSACIG00000013752	vars	100	65.146	ENSLAFG00000023090	VARS	100	65.146	Loxodonta_africana
ENSACIG00000013752	vars	100	65.412	ENSMFAG00000001032	VARS	100	65.725	Macaca_fascicularis
ENSACIG00000013752	vars	100	65.412	ENSMMUG00000006828	VARS	100	65.725	Macaca_mulatta
ENSACIG00000013752	vars	100	65.412	ENSMNEG00000042072	VARS	100	65.725	Macaca_nemestrina
ENSACIG00000013752	vars	100	65.490	ENSMLEG00000039307	VARS	100	65.804	Mandrillus_leucophaeus
ENSACIG00000013752	vars	100	89.945	ENSMAMG00000003949	vars	100	89.945	Mastacembelus_armatus
ENSACIG00000013752	vars	100	93.349	ENSMZEG00005018327	vars	97	93.349	Maylandia_zebra
ENSACIG00000013752	vars	100	64.780	ENSMAUG00000006715	Vars	100	65.098	Mesocricetus_auratus
ENSACIG00000013752	vars	100	65.463	ENSMICG00000003548	VARS	100	65.255	Microcebus_murinus
ENSACIG00000013752	vars	100	64.190	ENSMOCG00000015404	Vars	100	64.303	Microtus_ochrogaster
ENSACIG00000013752	vars	100	87.550	ENSMMOG00000015801	vars	100	87.550	Mola_mola
ENSACIG00000013752	vars	100	65.804	ENSMODG00000015204	-	100	65.725	Monodelphis_domestica
ENSACIG00000013752	vars	99	88.898	ENSMALG00000022532	vars	99	88.898	Monopterus_albus
ENSACIG00000013752	vars	100	65.460	MGP_CAROLIEiJ_G0021491	Vars	100	65.569	Mus_caroli
ENSACIG00000013752	vars	100	65.224	ENSMUSG00000007029	Vars	100	65.333	Mus_musculus
ENSACIG00000013752	vars	100	65.224	MGP_PahariEiJ_G0020486	Vars	100	65.224	Mus_pahari
ENSACIG00000013752	vars	100	65.303	MGP_SPRETEiJ_G0022396	Vars	100	65.412	Mus_spretus
ENSACIG00000013752	vars	100	65.409	ENSMPUG00000010821	VARS	100	65.466	Mustela_putorius_furo
ENSACIG00000013752	vars	77	68.548	ENSMLUG00000013126	VARS	100	68.442	Myotis_lucifugus
ENSACIG00000013752	vars	100	65.303	ENSNGAG00000012151	Vars	100	65.385	Nannospalax_galili
ENSACIG00000013752	vars	100	93.192	ENSNBRG00000020520	vars	100	93.192	Neolamprologus_brichardi
ENSACIG00000013752	vars	100	65.330	ENSNLEG00000006351	VARS	100	65.569	Nomascus_leucogenys
ENSACIG00000013752	vars	100	63.836	ENSMEUG00000011378	VARS	100	63.502	Notamacropus_eugenii
ENSACIG00000013752	vars	100	65.566	ENSOPRG00000003607	VARS	100	65.882	Ochotona_princeps
ENSACIG00000013752	vars	100	64.673	ENSODEG00000017681	VARS	100	64.595	Octodon_degus
ENSACIG00000013752	vars	100	94.090	ENSONIG00000013064	vars	100	94.174	Oreochromis_niloticus
ENSACIG00000013752	vars	77	67.542	ENSOANG00000005400	VARS	98	67.303	Ornithorhynchus_anatinus
ENSACIG00000013752	vars	100	63.780	ENSOCUG00000022463	VARS	100	63.594	Oryctolagus_cuniculus
ENSACIG00000013752	vars	100	88.190	ENSORLG00000013063	vars	100	88.190	Oryzias_latipes
ENSACIG00000013752	vars	100	88.759	ENSORLG00020003504	vars	100	88.759	Oryzias_latipes_hni
ENSACIG00000013752	vars	100	88.672	ENSORLG00015009001	vars	100	88.906	Oryzias_latipes_hsok
ENSACIG00000013752	vars	100	89.375	ENSOMEG00000015016	vars	100	89.375	Oryzias_melastigma
ENSACIG00000013752	vars	100	65.122	ENSOGAG00000007515	VARS	100	65.023	Otolemur_garnettii
ENSACIG00000013752	vars	100	65.330	ENSPPAG00000034012	VARS	100	65.569	Pan_paniscus
ENSACIG00000013752	vars	100	65.566	ENSPPRG00000014855	VARS	100	65.725	Panthera_pardus
ENSACIG00000013752	vars	85	69.703	ENSPTIG00000010462	VARS	95	69.189	Panthera_tigris_altaica
ENSACIG00000013752	vars	100	65.252	ENSPTRG00000017985	VARS	100	65.490	Pan_troglodytes
ENSACIG00000013752	vars	100	63.913	ENSPANG00000014565	VARS	100	64.224	Papio_anubis
ENSACIG00000013752	vars	100	80.264	ENSPKIG00000016304	vars	100	80.264	Paramormyrops_kingsleyae
ENSACIG00000013752	vars	100	85.771	ENSPMGG00000023909	vars	100	85.771	Periophthalmus_magnuspinnatus
ENSACIG00000013752	vars	100	65.016	ENSPEMG00000006639	Vars	100	65.333	Peromyscus_maniculatus_bairdii
ENSACIG00000013752	vars	100	65.647	ENSPCIG00000018553	VARS	100	65.725	Phascolarctos_cinereus
ENSACIG00000013752	vars	100	89.498	ENSPFOG00000015690	vars	100	89.498	Poecilia_formosa
ENSACIG00000013752	vars	100	89.342	ENSPLAG00000009590	vars	100	89.342	Poecilia_latipinna
ENSACIG00000013752	vars	100	89.420	ENSPMEG00000004708	vars	100	89.420	Poecilia_mexicana
ENSACIG00000013752	vars	100	87.200	ENSPREG00000013264	vars	100	87.280	Poecilia_reticulata
ENSACIG00000013752	vars	100	64.072	ENSPPYG00000016460	VARS	100	63.900	Pongo_abelii
ENSACIG00000013752	vars	86	66.252	ENSPCAG00000013565	VARS	86	66.252	Procavia_capensis
ENSACIG00000013752	vars	100	65.200	ENSPCOG00000010942	VARS	100	65.361	Propithecus_coquereli
ENSACIG00000013752	vars	100	63.108	ENSPVAG00000012403	VARS	100	63.451	Pteropus_vampyrus
ENSACIG00000013752	vars	100	93.427	ENSPNYG00000022511	vars	100	93.427	Pundamilia_nyererei
ENSACIG00000013752	vars	100	82.995	ENSPNAG00000020962	vars	100	83.229	Pygocentrus_nattereri
ENSACIG00000013752	vars	100	65.173	ENSRNOG00000000867	Vars	100	64.996	Rattus_norvegicus
ENSACIG00000013752	vars	100	65.412	ENSRBIG00000041669	VARS	100	65.725	Rhinopithecus_bieti
ENSACIG00000013752	vars	100	65.412	ENSRROG00000045490	VARS	100	65.725	Rhinopithecus_roxellana
ENSACIG00000013752	vars	100	64.937	ENSSBOG00000035402	VARS	100	65.176	Saimiri_boliviensis_boliviensis
ENSACIG00000013752	vars	100	65.285	ENSSHAG00000006937	VARS	100	65.520	Sarcophilus_harrisii
ENSACIG00000013752	vars	100	79.455	ENSSFOG00015014272	vars	100	79.455	Scleropages_formosus
ENSACIG00000013752	vars	100	87.891	ENSSMAG00000009596	vars	99	87.891	Scophthalmus_maximus
ENSACIG00000013752	vars	100	91.016	ENSSDUG00000014177	vars	100	91.094	Seriola_dumerili
ENSACIG00000013752	vars	100	90.625	ENSSLDG00000025316	vars	100	90.703	Seriola_lalandi_dorsalis
ENSACIG00000013752	vars	100	90.431	ENSSPAG00000017068	vars	100	90.431	Stegastes_partitus
ENSACIG00000013752	vars	100	65.200	ENSSSCG00000038950	VARS	100	65.361	Sus_scrofa
ENSACIG00000013752	vars	82	82.415	ENSTRUG00000012307	vars	98	82.387	Takifugu_rubripes
ENSACIG00000013752	vars	100	87.599	ENSTNIG00000008011	vars	100	87.599	Tetraodon_nigroviridis
ENSACIG00000013752	vars	100	59.481	ENSTTRG00000014128	VARS	100	59.481	Tursiops_truncatus
ENSACIG00000013752	vars	100	63.672	ENSUAMG00000010424	VARS	100	63.735	Ursus_americanus
ENSACIG00000013752	vars	100	59.876	ENSUMAG00000013486	VARS	98	64.678	Ursus_maritimus
ENSACIG00000013752	vars	100	65.517	ENSVVUG00000021323	VARS	100	65.336	Vulpes_vulpes
ENSACIG00000013752	vars	100	64.886	ENSXETG00000024076	vars	100	64.839	Xenopus_tropicalis
ENSACIG00000013752	vars	100	90.032	ENSXCOG00000019172	vars	100	90.032	Xiphophorus_couchianus
ENSACIG00000013752	vars	100	89.734	ENSXMAG00000010927	vars	100	89.734	Xiphophorus_maculatus