EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000013806 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 7648 bases
Position: chrCCOE01000317.1:99335-106982
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000017729	S10_plectin	PF03501.15	7.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000018208	-	543	-	ENSACIP00000017729	180 (aa)	-	-

Gene Model

Click here to download ENSACIG00000013806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000013806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000013806	-	74	57.143	ENSACIG00000019704	-	65	57.143
ENSACIG00000013806	-	73	55.147	ENSACIG00000010800	rps10	80	52.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000013806	-	58	61.905	ENSAPOG00000016494	-	54	61.905	Acanthochromis_polyacanthus
ENSACIG00000013806	-	66	92.437	ENSAPOG00000014059	-	82	92.437	Acanthochromis_polyacanthus
ENSACIG00000013806	-	80	87.500	ENSAOCG00000011000	-	83	88.028	Amphiprion_ocellaris
ENSACIG00000013806	-	62	63.964	ENSAOCG00000007730	-	65	63.964	Amphiprion_ocellaris
ENSACIG00000013806	-	60	91.667	ENSAPEG00000019531	-	61	91.667	Amphiprion_percula
ENSACIG00000013806	-	57	69.608	ENSATEG00000004340	-	72	69.608	Anabas_testudineus
ENSACIG00000013806	-	73	56.818	ENSACLG00000001013	-	73	56.818	Astatotilapia_calliptera
ENSACIG00000013806	-	69	81.600	ENSAMXG00000037914	-	75	81.600	Astyanax_mexicanus
ENSACIG00000013806	-	52	55.319	WBGene00004479	rps-10	62	55.319	Caenorhabditis_elegans
ENSACIG00000013806	-	57	59.223	ENSCING00000006180	-	64	59.223	Ciona_intestinalis
ENSACIG00000013806	-	76	85.294	ENSCSEG00000009179	-	80	85.294	Cynoglossus_semilaevis
ENSACIG00000013806	-	56	57.426	FBgn0027494	RpS10a	61	57.426	Drosophila_melanogaster
ENSACIG00000013806	-	53	64.211	FBgn0285947	RpS10b	59	64.211	Drosophila_melanogaster
ENSACIG00000013806	-	57	56.250	ENSEBUG00000015221	-	97	46.358	Eptatretus_burgeri
ENSACIG00000013806	-	92	52.273	ENSEASG00005009727	-	53	64.286	Equus_asinus_asinus
ENSACIG00000013806	-	76	86.131	ENSFHEG00000008769	-	89	83.803	Fundulus_heteroclitus
ENSACIG00000013806	-	94	66.667	ENSGAFG00000001335	-	65	88.889	Gambusia_affinis
ENSACIG00000013806	-	78	88.194	ENSHBUG00000023819	-	87	88.194	Haplochromis_burtoni
ENSACIG00000013806	-	73	56.818	ENSHBUG00000018067	-	73	56.818	Haplochromis_burtoni
ENSACIG00000013806	-	73	65.672	ENSLBEG00000020432	-	84	65.672	Labrus_bergylta
ENSACIG00000013806	-	69	66.400	ENSLACG00000010998	-	76	64.394	Latimeria_chalumnae
ENSACIG00000013806	-	73	56.818	ENSMZEG00005026198	-	73	56.818	Maylandia_zebra
ENSACIG00000013806	-	73	94.656	ENSMZEG00005007838	-	87	88.194	Maylandia_zebra
ENSACIG00000013806	-	63	77.049	ENSMMOG00000003228	-	69	77.049	Mola_mola
ENSACIG00000013806	-	95	53.143	ENSMMOG00000014380	-	62	65.079	Mola_mola
ENSACIG00000013806	-	68	60.656	ENSMALG00000015614	-	76	60.656	Monopterus_albus
ENSACIG00000013806	-	73	56.818	ENSNBRG00000016554	-	73	56.818	Neolamprologus_brichardi
ENSACIG00000013806	-	70	96.825	ENSNBRG00000008848	-	95	94.161	Neolamprologus_brichardi
ENSACIG00000013806	-	88	65.031	ENSPKIG00000013061	-	76	71.014	Paramormyrops_kingsleyae
ENSACIG00000013806	-	83	78.523	ENSPMGG00000017071	-	73	83.212	Periophthalmus_magnuspinnatus
ENSACIG00000013806	-	55	70.707	ENSPMAG00000010266	-	53	70.707	Petromyzon_marinus
ENSACIG00000013806	-	57	62.136	ENSPMAG00000003064	-	61	64.646	Petromyzon_marinus
ENSACIG00000013806	-	59	88.679	ENSPLAG00000012690	-	65	86.364	Poecilia_latipinna
ENSACIG00000013806	-	78	88.889	ENSPNYG00000012665	-	87	88.889	Pundamilia_nyererei
ENSACIG00000013806	-	73	56.061	ENSPNYG00000006286	-	73	56.061	Pundamilia_nyererei
ENSACIG00000013806	-	72	63.636	ENSPNAG00000021290	-	71	63.636	Pygocentrus_nattereri
ENSACIG00000013806	-	56	47.000	YMR230W	RPS10B	93	47.000	Saccharomyces_cerevisiae
ENSACIG00000013806	-	56	48.000	YOR293W	RPS10A	93	48.000	Saccharomyces_cerevisiae
ENSACIG00000013806	-	56	78.218	ENSSFOG00015012004	-	57	78.218	Scleropages_formosus
ENSACIG00000013806	-	80	67.361	ENSSFOG00015009603	-	68	71.111	Scleropages_formosus
ENSACIG00000013806	-	82	58.667	ENSSDUG00000011052	-	80	62.406	Seriola_dumerili
ENSACIG00000013806	-	76	91.176	ENSSDUG00000010997	-	81	91.176	Seriola_dumerili
ENSACIG00000013806	-	83	86.000	ENSSLDG00000012473	-	92	87.413	Seriola_lalandi_dorsalis
ENSACIG00000013806	-	74	60.448	ENSSLDG00000016257	-	73	60.448	Seriola_lalandi_dorsalis
ENSACIG00000013806	-	64	83.621	ENSSPAG00000015615	-	91	83.621	Stegastes_partitus
ENSACIG00000013806	-	53	67.368	ENSSPAG00000012512	-	50	67.368	Stegastes_partitus
ENSACIG00000013806	-	55	75.758	ENSSSCG00000033521	-	61	75.758	Sus_scrofa
ENSACIG00000013806	-	89	55.030	ENSXETG00000032983	-	71	63.704	Xenopus_tropicalis
ENSACIG00000013806	-	82	84.354	ENSXCOG00000016917	-	85	88.321	Xiphophorus_couchianus
ENSACIG00000013806	-	61	72.727	ENSXMAG00000029046	-	70	72.727	Xiphophorus_maculatus