EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000014549 (Gene tree)
Gene ID: -
Gene Symbol: POLR2J2
Alias: RPB11b1
Full Name: RNA polymerase II subunit J2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5579 bases
Position: chrCCOE01001734.1:191155-196733
Accession: 23208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000018714	RNA_pol_L_2	PF13656.6	5.6e-20	1	1
ENSACIP00000018714	RNA_pol_L	PF01193.24	0.00084	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000019218	POLR2J2-201	339	-	ENSACIP00000018714	112 (aa)	-	-

Gene Model

Click here to download ENSACIG00000014549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000014549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000014549	POLR2J2	54	43.750	ENSACIG00000013328	polr1d	56	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000014549	POLR2J2	91	71.818	ENSG00000005075	POLR2J	93	71.818	Homo_sapiens
ENSACIG00000014549	POLR2J2	91	69.091	ENSG00000228049	POLR2J2	94	69.091	Homo_sapiens
ENSACIG00000014549	POLR2J2	91	77.273	ENSAPOG00000019538	polr2j	93	77.273	Acanthochromis_polyacanthus
ENSACIG00000014549	POLR2J2	90	70.642	ENSAMEG00000015480	-	85	70.642	Ailuropoda_melanoleuca
ENSACIG00000014549	POLR2J2	91	77.273	ENSAOCG00000006937	polr2j	93	77.273	Amphiprion_ocellaris
ENSACIG00000014549	POLR2J2	91	77.273	ENSAPEG00000021761	polr2j	93	77.273	Amphiprion_percula
ENSACIG00000014549	POLR2J2	91	77.273	ENSATEG00000013312	-	93	77.273	Anabas_testudineus
ENSACIG00000014549	POLR2J2	91	77.273	ENSATEG00000009731	polr2j	93	77.273	Anabas_testudineus
ENSACIG00000014549	POLR2J2	77	64.894	ENSAPLG00000003744	-	92	64.894	Anas_platyrhynchos
ENSACIG00000014549	POLR2J2	91	65.455	ENSACAG00000000251	POLR2J	93	65.455	Anolis_carolinensis
ENSACIG00000014549	POLR2J2	91	77.273	ENSACLG00000014564	polr2j	93	77.273	Astatotilapia_calliptera
ENSACIG00000014549	POLR2J2	91	74.545	ENSAMXG00000007517	polr2j	93	74.545	Astyanax_mexicanus
ENSACIG00000014549	POLR2J2	54	68.852	ENSBTAG00000048046	-	51	68.852	Bos_taurus
ENSACIG00000014549	POLR2J2	66	72.973	WBGene00012187	rpb-11	60	72.973	Caenorhabditis_elegans
ENSACIG00000014549	POLR2J2	91	71.818	ENSCJAG00000016203	-	99	66.116	Callithrix_jacchus
ENSACIG00000014549	POLR2J2	91	71.818	ENSCAFG00000013683	-	93	71.818	Canis_familiaris
ENSACIG00000014549	POLR2J2	75	66.304	ENSTSYG00000029243	-	78	66.304	Carlito_syrichta
ENSACIG00000014549	POLR2J2	91	71.818	ENSCPOG00000001401	-	93	71.818	Cavia_porcellus
ENSACIG00000014549	POLR2J2	91	49.091	ENSCATG00000016595	-	88	55.294	Cercocebus_atys
ENSACIG00000014549	POLR2J2	91	71.818	ENSCLAG00000005238	-	93	71.818	Chinchilla_lanigera
ENSACIG00000014549	POLR2J2	91	71.818	ENSCSAG00000018092	-	93	71.818	Chlorocebus_sabaeus
ENSACIG00000014549	POLR2J2	91	63.636	ENSCING00000020531	-	93	63.636	Ciona_intestinalis
ENSACIG00000014549	POLR2J2	82	69.565	ENSCSAVG00000006948	-	78	69.565	Ciona_savignyi
ENSACIG00000014549	POLR2J2	91	71.818	ENSCGRG00001012814	Polr2j	93	71.818	Cricetulus_griseus_chok1gshd
ENSACIG00000014549	POLR2J2	52	87.931	ENSCGRG00000008433	Polr2j	51	87.931	Cricetulus_griseus_crigri
ENSACIG00000014549	POLR2J2	91	75.455	ENSCSEG00000020352	polr2j	93	75.455	Cynoglossus_semilaevis
ENSACIG00000014549	POLR2J2	91	77.273	ENSCVAG00000014267	polr2j	93	77.273	Cyprinodon_variegatus
ENSACIG00000014549	POLR2J2	91	73.636	ENSDARG00000035146	polr2j	93	73.636	Danio_rerio
ENSACIG00000014549	POLR2J2	91	71.818	ENSDORG00000005934	Polr2j	93	71.818	Dipodomys_ordii
ENSACIG00000014549	POLR2J2	91	62.727	FBgn0032634	Rpb11	93	62.727	Drosophila_melanogaster
ENSACIG00000014549	POLR2J2	91	46.364	ENSEBUG00000016100	polr2j	91	46.364	Eptatretus_burgeri
ENSACIG00000014549	POLR2J2	91	71.818	ENSEASG00005016864	-	93	71.818	Equus_asinus_asinus
ENSACIG00000014549	POLR2J2	91	74.545	ENSELUG00000012822	polr2j	93	74.545	Esox_lucius
ENSACIG00000014549	POLR2J2	91	71.818	ENSFCAG00000000377	-	93	71.818	Felis_catus
ENSACIG00000014549	POLR2J2	91	71.818	ENSFALG00000009523	POLR2J	93	71.818	Ficedula_albicollis
ENSACIG00000014549	POLR2J2	91	71.818	ENSFDAG00000010507	-	93	71.818	Fukomys_damarensis
ENSACIG00000014549	POLR2J2	91	77.273	ENSFHEG00000006625	polr2j	93	77.273	Fundulus_heteroclitus
ENSACIG00000014549	POLR2J2	91	74.545	ENSGMOG00000018207	polr2j	93	74.545	Gadus_morhua
ENSACIG00000014549	POLR2J2	91	71.818	ENSGALG00000030808	-	93	71.818	Gallus_gallus
ENSACIG00000014549	POLR2J2	91	77.273	ENSGAFG00000019555	polr2j	93	77.273	Gambusia_affinis
ENSACIG00000014549	POLR2J2	91	77.273	ENSGACG00000003310	polr2j	93	77.273	Gasterosteus_aculeatus
ENSACIG00000014549	POLR2J2	88	60.377	ENSGAGG00000018304	-	89	60.377	Gopherus_agassizii
ENSACIG00000014549	POLR2J2	67	70.667	ENSGGOG00000004519	-	59	70.667	Gorilla_gorilla
ENSACIG00000014549	POLR2J2	91	77.273	ENSHBUG00000008467	polr2j	93	77.273	Haplochromis_burtoni
ENSACIG00000014549	POLR2J2	91	71.818	ENSHGLG00000013598	POLR2J	96	71.963	Heterocephalus_glaber_female
ENSACIG00000014549	POLR2J2	91	71.818	ENSHGLG00100011242	POLR2J	96	71.963	Heterocephalus_glaber_male
ENSACIG00000014549	POLR2J2	91	74.545	ENSHCOG00000014827	polr2j	63	74.545	Hippocampus_comes
ENSACIG00000014549	POLR2J2	91	74.545	ENSIPUG00000023960	polr2j	93	74.545	Ictalurus_punctatus
ENSACIG00000014549	POLR2J2	91	71.818	ENSSTOG00000006377	POLR2J	95	71.963	Ictidomys_tridecemlineatus
ENSACIG00000014549	POLR2J2	91	68.182	ENSJJAG00000018834	-	93	68.182	Jaculus_jaculus
ENSACIG00000014549	POLR2J2	91	71.818	ENSJJAG00000013854	-	93	71.818	Jaculus_jaculus
ENSACIG00000014549	POLR2J2	91	77.273	ENSKMAG00000014581	polr2j	73	77.273	Kryptolebias_marmoratus
ENSACIG00000014549	POLR2J2	91	76.364	ENSLBEG00000005885	polr2j	93	76.364	Labrus_bergylta
ENSACIG00000014549	POLR2J2	91	74.545	ENSLOCG00000001885	polr2j	83	74.545	Lepisosteus_oculatus
ENSACIG00000014549	POLR2J2	91	71.818	ENSLAFG00000021507	-	93	71.818	Loxodonta_africana
ENSACIG00000014549	POLR2J2	88	71.963	ENSMMUG00000012019	POLR2J	82	71.963	Macaca_mulatta
ENSACIG00000014549	POLR2J2	91	76.364	ENSMAMG00000009374	polr2j	93	76.364	Mastacembelus_armatus
ENSACIG00000014549	POLR2J2	91	77.273	ENSMZEG00005011932	polr2j	93	77.273	Maylandia_zebra
ENSACIG00000014549	POLR2J2	91	71.818	ENSMGAG00000003534	POLR2J	93	71.818	Meleagris_gallopavo
ENSACIG00000014549	POLR2J2	91	71.818	ENSMAUG00000013049	Polr2j	93	71.818	Mesocricetus_auratus
ENSACIG00000014549	POLR2J2	78	65.957	ENSMICG00000026811	-	94	65.957	Microcebus_murinus
ENSACIG00000014549	POLR2J2	91	71.818	ENSMOCG00000001294	Polr2j	93	71.818	Microtus_ochrogaster
ENSACIG00000014549	POLR2J2	91	76.364	ENSMMOG00000013265	polr2j	93	76.364	Mola_mola
ENSACIG00000014549	POLR2J2	88	71.963	ENSMODG00000013617	-	83	71.963	Monodelphis_domestica
ENSACIG00000014549	POLR2J2	91	76.364	ENSMALG00000020749	polr2j	93	76.364	Monopterus_albus
ENSACIG00000014549	POLR2J2	91	71.818	MGP_CAROLIEiJ_G0027851	Polr2j	95	71.963	Mus_caroli
ENSACIG00000014549	POLR2J2	91	71.818	ENSMUSG00000039771	Polr2j	95	71.963	Mus_musculus
ENSACIG00000014549	POLR2J2	91	71.818	MGP_PahariEiJ_G0024434	Polr2j	93	71.818	Mus_pahari
ENSACIG00000014549	POLR2J2	91	71.818	MGP_SPRETEiJ_G0028853	Polr2j	95	71.963	Mus_spretus
ENSACIG00000014549	POLR2J2	91	71.818	ENSMLUG00000010467	POLR2J	93	71.818	Myotis_lucifugus
ENSACIG00000014549	POLR2J2	91	71.818	ENSNGAG00000023412	Polr2j	95	71.963	Nannospalax_galili
ENSACIG00000014549	POLR2J2	66	97.297	ENSNBRG00000006580	polr2j	56	97.297	Neolamprologus_brichardi
ENSACIG00000014549	POLR2J2	91	54.545	ENSODEG00000008559	-	93	54.545	Octodon_degus
ENSACIG00000014549	POLR2J2	91	71.818	ENSODEG00000015648	-	95	71.963	Octodon_degus
ENSACIG00000014549	POLR2J2	91	77.273	ENSONIG00000000259	polr2j	93	77.273	Oreochromis_niloticus
ENSACIG00000014549	POLR2J2	91	69.091	ENSOANG00000020912	POLR2J	93	69.091	Ornithorhynchus_anatinus
ENSACIG00000014549	POLR2J2	88	71.963	ENSOCUG00000023609	POLR2J	83	71.963	Oryctolagus_cuniculus
ENSACIG00000014549	POLR2J2	91	77.273	ENSORLG00000029046	polr2j	77	77.273	Oryzias_latipes
ENSACIG00000014549	POLR2J2	91	77.273	ENSORLG00020007625	polr2j	77	77.273	Oryzias_latipes_hni
ENSACIG00000014549	POLR2J2	91	77.273	ENSORLG00015003457	polr2j	77	77.273	Oryzias_latipes_hsok
ENSACIG00000014549	POLR2J2	91	78.182	ENSOMEG00000002097	polr2j	93	78.182	Oryzias_melastigma
ENSACIG00000014549	POLR2J2	88	53.704	ENSOGAG00000008250	-	84	53.704	Otolemur_garnettii
ENSACIG00000014549	POLR2J2	91	71.818	ENSOARG00000014204	-	91	71.818	Ovis_aries
ENSACIG00000014549	POLR2J2	91	71.818	ENSPPRG00000012439	-	93	71.818	Panthera_pardus
ENSACIG00000014549	POLR2J2	88	61.682	ENSPTIG00000018714	-	92	64.583	Panthera_tigris_altaica
ENSACIG00000014549	POLR2J2	76	65.591	ENSPSIG00000010173	-	92	65.591	Pelodiscus_sinensis
ENSACIG00000014549	POLR2J2	91	77.273	ENSPMGG00000021256	polr2j	93	77.273	Periophthalmus_magnuspinnatus
ENSACIG00000014549	POLR2J2	91	71.818	ENSPEMG00000015733	Polr2j	93	71.818	Peromyscus_maniculatus_bairdii
ENSACIG00000014549	POLR2J2	91	71.818	ENSPCIG00000009026	-	93	71.818	Phascolarctos_cinereus
ENSACIG00000014549	POLR2J2	91	77.273	ENSPFOG00000012001	polr2j	92	77.273	Poecilia_formosa
ENSACIG00000014549	POLR2J2	91	77.273	ENSPLAG00000014075	polr2j	93	77.273	Poecilia_latipinna
ENSACIG00000014549	POLR2J2	91	77.273	ENSPMEG00000020585	polr2j	93	77.273	Poecilia_mexicana
ENSACIG00000014549	POLR2J2	91	77.273	ENSPREG00000015255	polr2j	93	77.273	Poecilia_reticulata
ENSACIG00000014549	POLR2J2	91	71.818	ENSPCOG00000024573	-	93	71.818	Propithecus_coquereli
ENSACIG00000014549	POLR2J2	88	71.963	ENSPVAG00000017770	-	61	71.963	Pteropus_vampyrus
ENSACIG00000014549	POLR2J2	91	77.273	ENSPNYG00000014832	polr2j	93	77.273	Pundamilia_nyererei
ENSACIG00000014549	POLR2J2	91	72.727	ENSPNAG00000016595	polr2j	93	72.727	Pygocentrus_nattereri
ENSACIG00000014549	POLR2J2	91	71.818	ENSRNOG00000001430	Polr2j	93	71.818	Rattus_norvegicus
ENSACIG00000014549	POLR2J2	91	71.818	ENSSBOG00000025579	-	93	71.818	Saimiri_boliviensis_boliviensis
ENSACIG00000014549	POLR2J2	96	70.435	ENSSFOG00015003371	polr2j	86	70.435	Scleropages_formosus
ENSACIG00000014549	POLR2J2	91	77.273	ENSSMAG00000006729	polr2j	93	77.273	Scophthalmus_maximus
ENSACIG00000014549	POLR2J2	91	77.273	ENSSDUG00000018490	polr2j	93	77.273	Seriola_dumerili
ENSACIG00000014549	POLR2J2	91	77.273	ENSSLDG00000022354	polr2j	93	77.273	Seriola_lalandi_dorsalis
ENSACIG00000014549	POLR2J2	91	71.818	ENSSPUG00000010802	-	93	71.818	Sphenodon_punctatus
ENSACIG00000014549	POLR2J2	91	77.273	ENSSPAG00000021953	polr2j	93	77.273	Stegastes_partitus
ENSACIG00000014549	POLR2J2	91	71.818	ENSSSCG00000007688	-	93	71.818	Sus_scrofa
ENSACIG00000014549	POLR2J2	91	60.000	ENSSSCG00000003703	-	77	60.000	Sus_scrofa
ENSACIG00000014549	POLR2J2	76	65.591	ENSTGUG00000004501	-	92	65.591	Taeniopygia_guttata
ENSACIG00000014549	POLR2J2	91	76.364	ENSTRUG00000020842	polr2j	93	76.364	Takifugu_rubripes
ENSACIG00000014549	POLR2J2	91	75.455	ENSTNIG00000002994	polr2j	93	75.455	Tetraodon_nigroviridis
ENSACIG00000014549	POLR2J2	88	57.009	ENSTBEG00000005797	-	70	57.009	Tupaia_belangeri
ENSACIG00000014549	POLR2J2	91	71.818	ENSUAMG00000011310	-	93	71.818	Ursus_americanus
ENSACIG00000014549	POLR2J2	91	71.818	ENSUMAG00000012594	-	93	71.818	Ursus_maritimus
ENSACIG00000014549	POLR2J2	91	70.909	ENSXETG00000001108	polr2j	93	70.909	Xenopus_tropicalis
ENSACIG00000014549	POLR2J2	91	77.273	ENSXMAG00000012422	polr2j	93	77.273	Xiphophorus_maculatus