EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000014621 (Gene tree)
Gene ID: -
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4584 bases
Position: chrCCOE01001696.1:515152-519735
Accession: ZDB-GENE-040718-311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000018765	MMR_HSR1	PF01926.23	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000019270	-	801	-	ENSACIP00000018765	266 (aa)	-	-

Gene Model

Click here to download ENSACIG00000014621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000014621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000014621	srprb	52	30.435	ENSACIG00000016782	-	78	30.435
ENSACIG00000014621	srprb	60	30.625	ENSACIG00000012912	arf2b	68	30.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000014621	srprb	100	90.672	ENSAPOG00000021219	srprb	97	90.672	Acanthochromis_polyacanthus
ENSACIG00000014621	srprb	100	91.045	ENSAOCG00000017265	srprb	97	91.045	Amphiprion_ocellaris
ENSACIG00000014621	srprb	100	91.045	ENSAPEG00000024541	srprb	86	91.045	Amphiprion_percula
ENSACIG00000014621	srprb	100	87.970	ENSATEG00000014016	srprb	97	87.970	Anabas_testudineus
ENSACIG00000014621	srprb	100	94.382	ENSACLG00000016748	srprb	97	94.382	Astatotilapia_calliptera
ENSACIG00000014621	srprb	100	71.053	ENSAMXG00000044118	srprb	100	71.053	Astyanax_mexicanus
ENSACIG00000014621	srprb	100	86.466	ENSCSEG00000017194	srprb	97	86.466	Cynoglossus_semilaevis
ENSACIG00000014621	srprb	100	86.466	ENSCVAG00000004221	srprb	100	86.466	Cyprinodon_variegatus
ENSACIG00000014621	srprb	100	69.173	ENSDARG00000030949	srprb	100	69.173	Danio_rerio
ENSACIG00000014621	srprb	95	83.004	ENSELUG00000009740	srprb	93	83.004	Esox_lucius
ENSACIG00000014621	srprb	100	86.842	ENSFHEG00000006004	srprb	100	86.842	Fundulus_heteroclitus
ENSACIG00000014621	srprb	100	80.451	ENSGMOG00000002081	srprb	94	82.745	Gadus_morhua
ENSACIG00000014621	srprb	99	85.985	ENSGAFG00000012593	srprb	99	85.985	Gambusia_affinis
ENSACIG00000014621	srprb	100	88.722	ENSGACG00000009891	srprb	98	88.722	Gasterosteus_aculeatus
ENSACIG00000014621	srprb	100	94.382	ENSHBUG00000002145	srprb	97	94.382	Haplochromis_burtoni
ENSACIG00000014621	srprb	100	83.083	ENSHCOG00000007732	srprb	99	83.083	Hippocampus_comes
ENSACIG00000014621	srprb	95	68.651	ENSIPUG00000004177	srprb	94	68.651	Ictalurus_punctatus
ENSACIG00000014621	srprb	100	84.962	ENSKMAG00000020736	srprb	100	84.962	Kryptolebias_marmoratus
ENSACIG00000014621	srprb	100	88.722	ENSLBEG00000021483	srprb	97	88.722	Labrus_bergylta
ENSACIG00000014621	srprb	98	71.264	ENSLOCG00000009740	srprb	86	73.152	Lepisosteus_oculatus
ENSACIG00000014621	srprb	100	90.602	ENSMAMG00000011876	srprb	97	90.602	Mastacembelus_armatus
ENSACIG00000014621	srprb	97	93.822	ENSMZEG00005016621	srprb	100	93.822	Maylandia_zebra
ENSACIG00000014621	srprb	100	87.970	ENSMMOG00000012550	srprb	98	87.970	Mola_mola
ENSACIG00000014621	srprb	100	87.218	ENSMALG00000012595	srprb	97	87.218	Monopterus_albus
ENSACIG00000014621	srprb	74	95.431	ENSNBRG00000004699	srprb	84	95.431	Neolamprologus_brichardi
ENSACIG00000014621	srprb	100	94.361	ENSONIG00000003788	srprb	79	94.361	Oreochromis_niloticus
ENSACIG00000014621	srprb	100	80.827	ENSORLG00000006430	srprb	97	80.827	Oryzias_latipes
ENSACIG00000014621	srprb	100	81.203	ENSORLG00020003413	srprb	97	81.203	Oryzias_latipes_hni
ENSACIG00000014621	srprb	100	81.203	ENSORLG00015000166	srprb	97	81.203	Oryzias_latipes_hsok
ENSACIG00000014621	srprb	100	83.459	ENSOMEG00000012735	srprb	97	83.459	Oryzias_melastigma
ENSACIG00000014621	srprb	100	68.914	ENSPKIG00000013147	srprb	99	68.914	Paramormyrops_kingsleyae
ENSACIG00000014621	srprb	100	83.083	ENSPMGG00000014061	srprb	97	83.083	Periophthalmus_magnuspinnatus
ENSACIG00000014621	srprb	99	86.742	ENSPFOG00000011347	srprb	96	86.742	Poecilia_formosa
ENSACIG00000014621	srprb	96	88.235	ENSPLAG00000001156	srprb	99	88.235	Poecilia_latipinna
ENSACIG00000014621	srprb	96	87.843	ENSPMEG00000012169	srprb	99	87.843	Poecilia_mexicana
ENSACIG00000014621	srprb	96	87.059	ENSPREG00000001449	srprb	99	87.059	Poecilia_reticulata
ENSACIG00000014621	srprb	100	94.382	ENSPNYG00000005911	srprb	97	94.382	Pundamilia_nyererei
ENSACIG00000014621	srprb	100	71.805	ENSPNAG00000009983	srprb	100	71.805	Pygocentrus_nattereri
ENSACIG00000014621	srprb	95	75.197	ENSSFOG00015019355	srprb	95	75.197	Scleropages_formosus
ENSACIG00000014621	srprb	100	88.722	ENSSMAG00000013202	srprb	97	88.722	Scophthalmus_maximus
ENSACIG00000014621	srprb	100	90.226	ENSSDUG00000018746	srprb	91	90.226	Seriola_dumerili
ENSACIG00000014621	srprb	100	90.602	ENSSLDG00000020560	srprb	97	90.602	Seriola_lalandi_dorsalis
ENSACIG00000014621	srprb	100	90.672	ENSSPAG00000008898	srprb	97	90.672	Stegastes_partitus
ENSACIG00000014621	srprb	100	87.218	ENSTRUG00000022463	srprb	97	87.218	Takifugu_rubripes
ENSACIG00000014621	srprb	98	82.061	ENSTNIG00000007725	srprb	100	82.061	Tetraodon_nigroviridis
ENSACIG00000014621	srprb	96	88.235	ENSXCOG00000012585	srprb	99	88.235	Xiphophorus_couchianus
ENSACIG00000014621	srprb	96	87.843	ENSXMAG00000028725	srprb	99	87.843	Xiphophorus_maculatus