EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000014943 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 6541 bases
Position: chrCCOE01000370.1:2144890-2151430
Accession: ZDB-GENE-030131-6428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000019219	RRM_1	PF00076.22	8.3e-28	1	2
ENSACIP00000019219	RRM_1	PF00076.22	8.3e-28	2	2
ENSACIP00000019199	RRM_1	PF00076.22	9.2e-19	1	1
ENSACIP00000019233	RRM_1	PF00076.22	5.6e-18	1	1
ENSACIP00000019226	RRM_1	PF00076.22	4.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000019738	-	1308	-	ENSACIP00000019219	435 (aa)	-	-
ENSACIT00000019751	-	1056	-	ENSACIP00000019233	351 (aa)	-	-
ENSACIT00000019717	-	1017	-	ENSACIP00000019199	338 (aa)	-	-
ENSACIT00000019745	-	876	-	ENSACIP00000019226	291 (aa)	-	-

Gene Model

Click here to download ENSACIG00000014943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000014943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000014943	rbm12b	99	40.127	ENSG00000183808	RBM12B	99	76.250	Homo_sapiens
ENSACIG00000014943	rbm12b	99	32.934	ENSAPOG00000008836	zgc:153215	95	30.464	Acanthochromis_polyacanthus
ENSACIG00000014943	rbm12b	97	74.333	ENSAPOG00000013963	rbm12b	93	74.333	Acanthochromis_polyacanthus
ENSACIG00000014943	rbm12b	99	40.184	ENSAMEG00000007134	RBM12B	57	39.630	Ailuropoda_melanoleuca
ENSACIG00000014943	rbm12b	97	75.667	ENSAOCG00000024270	rbm12b	93	75.667	Amphiprion_ocellaris
ENSACIG00000014943	rbm12b	98	31.549	ENSAOCG00000010819	zgc:153215	89	31.831	Amphiprion_ocellaris
ENSACIG00000014943	rbm12b	97	79.152	ENSAPEG00000022079	rbm12b	97	79.152	Amphiprion_percula
ENSACIG00000014943	rbm12b	88	53.750	ENSATEG00000001886	zgc:153215	77	51.136	Anabas_testudineus
ENSACIG00000014943	rbm12b	97	69.231	ENSATEG00000004578	rbm12b	97	69.231	Anabas_testudineus
ENSACIG00000014943	rbm12b	91	73.864	ENSAPLG00000002020	RBM12B	62	73.864	Anas_platyrhynchos
ENSACIG00000014943	rbm12b	99	39.490	ENSANAG00000034015	RBM12B	64	39.490	Aotus_nancymaae
ENSACIG00000014943	rbm12b	96	47.727	ENSACLG00000007675	zgc:153215	83	47.727	Astatotilapia_calliptera
ENSACIG00000014943	rbm12b	76	82.000	ENSACLG00000005578	rbm12b	54	93.939	Astatotilapia_calliptera
ENSACIG00000014943	rbm12b	98	82.550	ENSACLG00000005575	rbm12b	85	77.987	Astatotilapia_calliptera
ENSACIG00000014943	rbm12b	97	72.973	ENSAMXG00000041973	rbm12b	74	51.542	Astyanax_mexicanus
ENSACIG00000014943	rbm12b	97	57.143	ENSAMXG00000020853	zgc:153215	75	57.143	Astyanax_mexicanus
ENSACIG00000014943	rbm12b	99	40.635	ENSBTAG00000013408	RBM12B	56	40.000	Bos_taurus
ENSACIG00000014943	rbm12b	99	40.566	ENSCAFG00020012203	RBM12B	55	40.326	Canis_lupus_dingo
ENSACIG00000014943	rbm12b	99	40.635	ENSCHIG00000006790	RBM12B	74	40.635	Capra_hircus
ENSACIG00000014943	rbm12b	99	39.339	ENSTSYG00000012515	RBM12B	55	39.692	Carlito_syrichta
ENSACIG00000014943	rbm12b	99	40.952	ENSCAPG00000003543	RBM12B	51	40.041	Cavia_aperea
ENSACIG00000014943	rbm12b	99	40.952	ENSCPOG00000007815	RBM12B	51	40.041	Cavia_porcellus
ENSACIG00000014943	rbm12b	99	40.127	ENSCATG00000030769	RBM12B	62	40.127	Cercocebus_atys
ENSACIG00000014943	rbm12b	99	40.764	ENSCLAG00000017617	RBM12B	52	41.273	Chinchilla_lanigera
ENSACIG00000014943	rbm12b	99	40.127	ENSCSAG00000018559	RBM12B	54	40.127	Chlorocebus_sabaeus
ENSACIG00000014943	rbm12b	99	38.344	ENSCHOG00000008934	RBM12B	51	37.854	Choloepus_hoffmanni
ENSACIG00000014943	rbm12b	99	43.413	ENSCPBG00000003061	RBM12B	98	43.413	Chrysemys_picta_bellii
ENSACIG00000014943	rbm12b	99	40.127	ENSCANG00000030379	RBM12B	62	40.127	Colobus_angolensis_palliatus
ENSACIG00000014943	rbm12b	99	39.077	ENSCGRG00001008710	-	56	38.462	Cricetulus_griseus_chok1gshd
ENSACIG00000014943	rbm12b	97	63.455	ENSCSEG00000004610	rbm12b	91	63.455	Cynoglossus_semilaevis
ENSACIG00000014943	rbm12b	98	31.077	ENSCSEG00000001575	-	97	31.077	Cynoglossus_semilaevis
ENSACIG00000014943	rbm12b	97	57.807	ENSCVAG00000011047	rbm12b	93	58.140	Cyprinodon_variegatus
ENSACIG00000014943	rbm12b	71	38.647	ENSCVAG00000009259	-	72	42.246	Cyprinodon_variegatus
ENSACIG00000014943	rbm12b	94	69.444	ENSDARG00000079717	rbm12b	98	46.488	Danio_rerio
ENSACIG00000014943	rbm12b	99	40.575	ENSDORG00000024034	-	53	40.575	Dipodomys_ordii
ENSACIG00000014943	rbm12b	99	39.498	ENSETEG00000013005	-	65	40.041	Echinops_telfairi
ENSACIG00000014943	rbm12b	93	33.916	ENSEBUG00000009015	-	100	30.211	Eptatretus_burgeri
ENSACIG00000014943	rbm12b	98	30.688	ENSEBUG00000004292	-	68	30.688	Eptatretus_burgeri
ENSACIG00000014943	rbm12b	97	32.181	ENSEBUG00000010930	-	84	33.254	Eptatretus_burgeri
ENSACIG00000014943	rbm12b	99	40.566	ENSEASG00005016297	RBM12B	55	41.031	Equus_asinus_asinus
ENSACIG00000014943	rbm12b	99	40.881	ENSECAG00000017870	RBM12B	50	40.452	Equus_caballus
ENSACIG00000014943	rbm12b	99	40.566	ENSFCAG00000029274	RBM12B	56	40.535	Felis_catus
ENSACIG00000014943	rbm12b	99	42.136	ENSFALG00000014893	RBM12B	98	43.917	Ficedula_albicollis
ENSACIG00000014943	rbm12b	99	40.635	ENSFDAG00000005576	RBM12B	50	40.657	Fukomys_damarensis
ENSACIG00000014943	rbm12b	94	33.333	ENSFHEG00000014539	zgc:153215	96	33.092	Fundulus_heteroclitus
ENSACIG00000014943	rbm12b	97	59.333	ENSFHEG00000016425	rbm12b	75	57.442	Fundulus_heteroclitus
ENSACIG00000014943	rbm12b	97	60.000	ENSGMOG00000013467	rbm12b	93	68.571	Gadus_morhua
ENSACIG00000014943	rbm12b	99	44.413	ENSGALG00000035129	RBM12B	61	72.727	Gallus_gallus
ENSACIG00000014943	rbm12b	97	63.333	ENSGAFG00000007224	rbm12b	98	61.006	Gambusia_affinis
ENSACIG00000014943	rbm12b	97	31.339	ENSGAFG00000007845	zgc:153215	70	31.339	Gambusia_affinis
ENSACIG00000014943	rbm12b	97	65.667	ENSGACG00000008682	rbm12b	85	61.331	Gasterosteus_aculeatus
ENSACIG00000014943	rbm12b	99	42.407	ENSGAGG00000009774	RBM12B	76	38.168	Gopherus_agassizii
ENSACIG00000014943	rbm12b	99	40.127	ENSGGOG00000011909	RBM12B	61	40.127	Gorilla_gorilla
ENSACIG00000014943	rbm12b	97	47.727	ENSHBUG00000016150	zgc:153215	79	47.727	Haplochromis_burtoni
ENSACIG00000014943	rbm12b	98	82.215	ENSHBUG00000016227	rbm12b	99	77.987	Haplochromis_burtoni
ENSACIG00000014943	rbm12b	99	39.748	ENSHGLG00000009063	RBM12B	51	39.877	Heterocephalus_glaber_female
ENSACIG00000014943	rbm12b	99	39.748	ENSHGLG00100021324	RBM12B	51	39.877	Heterocephalus_glaber_male
ENSACIG00000014943	rbm12b	99	58.900	ENSHCOG00000014952	rbm12b	98	54.412	Hippocampus_comes
ENSACIG00000014943	rbm12b	97	51.333	ENSIPUG00000001167	RBM12B	72	47.771	Ictalurus_punctatus
ENSACIG00000014943	rbm12b	99	40.256	ENSSTOG00000027445	RBM12B	64	40.256	Ictidomys_tridecemlineatus
ENSACIG00000014943	rbm12b	99	40.810	ENSJJAG00000004165	-	67	40.351	Jaculus_jaculus
ENSACIG00000014943	rbm12b	97	32.624	ENSKMAG00000004958	zgc:153215	99	33.030	Kryptolebias_marmoratus
ENSACIG00000014943	rbm12b	97	60.870	ENSKMAG00000013704	rbm12b	74	60.128	Kryptolebias_marmoratus
ENSACIG00000014943	rbm12b	97	60.870	ENSKMAG00000013715	rbm12b	83	78.788	Kryptolebias_marmoratus
ENSACIG00000014943	rbm12b	97	32.143	ENSLBEG00000002597	zgc:153215	99	31.111	Labrus_bergylta
ENSACIG00000014943	rbm12b	96	75.824	ENSLACG00000007177	RBM12B	97	38.035	Latimeria_chalumnae
ENSACIG00000014943	rbm12b	97	50.309	ENSLOCG00000018344	rbm12b	93	50.309	Lepisosteus_oculatus
ENSACIG00000014943	rbm12b	97	40.895	ENSLAFG00000029949	RBM12B	57	39.918	Loxodonta_africana
ENSACIG00000014943	rbm12b	99	40.127	ENSMFAG00000045430	RBM12B	62	40.127	Macaca_fascicularis
ENSACIG00000014943	rbm12b	99	40.127	ENSMMUG00000005558	RBM12B	61	40.127	Macaca_mulatta
ENSACIG00000014943	rbm12b	99	40.127	ENSMNEG00000041292	RBM12B	62	40.127	Macaca_nemestrina
ENSACIG00000014943	rbm12b	99	40.446	ENSMLEG00000037288	RBM12B	61	40.446	Mandrillus_leucophaeus
ENSACIG00000014943	rbm12b	100	51.136	ENSMAMG00000012038	zgc:153215	73	51.136	Mastacembelus_armatus
ENSACIG00000014943	rbm12b	97	72.000	ENSMAMG00000011998	rbm12b	93	72.000	Mastacembelus_armatus
ENSACIG00000014943	rbm12b	97	78.523	ENSMZEG00005014845	rbm12b	87	72.537	Maylandia_zebra
ENSACIG00000014943	rbm12b	98	47.727	ENSMZEG00005005435	zgc:153215	79	47.727	Maylandia_zebra
ENSACIG00000014943	rbm12b	98	81.879	ENSMZEG00005015005	rbm12b	72	93.939	Maylandia_zebra
ENSACIG00000014943	rbm12b	99	44.413	ENSMGAG00000011985	RBM12B	98	41.379	Meleagris_gallopavo
ENSACIG00000014943	rbm12b	99	38.390	ENSMAUG00000021752	-	64	38.730	Mesocricetus_auratus
ENSACIG00000014943	rbm12b	99	39.172	ENSMICG00000036969	RBM12B	57	38.821	Microcebus_murinus
ENSACIG00000014943	rbm12b	99	39.441	ENSMOCG00000005603	-	58	38.193	Microtus_ochrogaster
ENSACIG00000014943	rbm12b	96	30.556	ENSMMOG00000003372	zgc:153215	80	30.606	Mola_mola
ENSACIG00000014943	rbm12b	97	65.342	ENSMMOG00000002404	rbm12b	94	65.342	Mola_mola
ENSACIG00000014943	rbm12b	99	44.411	ENSMODG00000007436	RBM12B	59	55.556	Monodelphis_domestica
ENSACIG00000014943	rbm12b	97	34.194	ENSMALG00000001222	zgc:153215	98	32.489	Monopterus_albus
ENSACIG00000014943	rbm12b	99	65.328	ENSMALG00000012059	rbm12b	93	66.890	Monopterus_albus
ENSACIG00000014943	rbm12b	99	39.759	ENSMUSG00000052137	Rbm12b2	66	38.462	Mus_musculus
ENSACIG00000014943	rbm12b	99	39.759	ENSMUSG00000046667	Rbm12b1	66	38.289	Mus_musculus
ENSACIG00000014943	rbm12b	99	39.441	MGP_SPRETEiJ_G0026765	-	60	38.462	Mus_spretus
ENSACIG00000014943	rbm12b	99	39.441	MGP_SPRETEiJ_G0026766	-	66	38.462	Mus_spretus
ENSACIG00000014943	rbm12b	99	40.881	ENSMPUG00000018637	RBM12B	54	40.881	Mustela_putorius_furo
ENSACIG00000014943	rbm12b	99	41.325	ENSMLUG00000002359	RBM12B	51	40.862	Myotis_lucifugus
ENSACIG00000014943	rbm12b	99	38.608	ENSNGAG00000002801	-	52	39.024	Nannospalax_galili
ENSACIG00000014943	rbm12b	97	46.591	ENSNBRG00000013644	zgc:153215	79	46.591	Neolamprologus_brichardi
ENSACIG00000014943	rbm12b	98	83.557	ENSNBRG00000015057	rbm12b	88	78.826	Neolamprologus_brichardi
ENSACIG00000014943	rbm12b	99	39.809	ENSNLEG00000032050	RBM12B	61	39.809	Nomascus_leucogenys
ENSACIG00000014943	rbm12b	99	40.635	ENSODEG00000019204	RBM12B	51	41.463	Octodon_degus
ENSACIG00000014943	rbm12b	98	84.228	ENSONIG00000020612	rbm12b	88	79.665	Oreochromis_niloticus
ENSACIG00000014943	rbm12b	96	47.727	ENSONIG00000006054	zgc:153215	84	47.727	Oreochromis_niloticus
ENSACIG00000014943	rbm12b	99	43.491	ENSOANG00000015735	-	91	44.985	Ornithorhynchus_anatinus
ENSACIG00000014943	rbm12b	99	38.658	ENSOCUG00000010353	RBM12B	56	38.337	Oryctolagus_cuniculus
ENSACIG00000014943	rbm12b	97	62.542	ENSORLG00000008228	rbm12b	84	61.407	Oryzias_latipes
ENSACIG00000014943	rbm12b	98	61.620	ENSORLG00020013619	rbm12b	82	61.620	Oryzias_latipes_hni
ENSACIG00000014943	rbm12b	98	61.620	ENSORLG00015019999	rbm12b	84	61.620	Oryzias_latipes_hsok
ENSACIG00000014943	rbm12b	97	32.715	ENSOMEG00000004220	zgc:153215	97	32.488	Oryzias_melastigma
ENSACIG00000014943	rbm12b	97	64.667	ENSOMEG00000022523	rbm12b	90	64.667	Oryzias_melastigma
ENSACIG00000014943	rbm12b	99	40.566	ENSPTIG00000020071	RBM12B	56	40.535	Panthera_tigris_altaica
ENSACIG00000014943	rbm12b	99	40.127	ENSPTRG00000020420	RBM12B	61	40.127	Pan_troglodytes
ENSACIG00000014943	rbm12b	99	40.127	ENSPANG00000035535	RBM12B	61	40.127	Papio_anubis
ENSACIG00000014943	rbm12b	97	51.090	ENSPKIG00000018719	rbm12b	73	49.797	Paramormyrops_kingsleyae
ENSACIG00000014943	rbm12b	98	33.233	ENSPKIG00000014851	zgc:153215	99	33.400	Paramormyrops_kingsleyae
ENSACIG00000014943	rbm12b	99	44.277	ENSPSIG00000001348	RBM12B	75	40.541	Pelodiscus_sinensis
ENSACIG00000014943	rbm12b	99	51.266	ENSPMGG00000012348	-	95	50.943	Periophthalmus_magnuspinnatus
ENSACIG00000014943	rbm12b	99	39.365	ENSPEMG00000008279	-	57	39.228	Peromyscus_maniculatus_bairdii
ENSACIG00000014943	rbm12b	99	45.015	ENSPCIG00000008556	RBM12B	60	55.556	Phascolarctos_cinereus
ENSACIG00000014943	rbm12b	96	54.651	ENSPFOG00000017451	zgc:153215	66	54.651	Poecilia_formosa
ENSACIG00000014943	rbm12b	97	66.434	ENSPFOG00000020937	rbm12b	95	63.283	Poecilia_formosa
ENSACIG00000014943	rbm12b	97	33.841	ENSPLAG00000000232	zgc:153215	99	31.087	Poecilia_latipinna
ENSACIG00000014943	rbm12b	97	63.333	ENSPLAG00000018782	rbm12b	98	61.635	Poecilia_latipinna
ENSACIG00000014943	rbm12b	97	33.434	ENSPMEG00000016662	zgc:153215	99	31.102	Poecilia_mexicana
ENSACIG00000014943	rbm12b	97	64.000	ENSPMEG00000011418	rbm12b	75	61.635	Poecilia_mexicana
ENSACIG00000014943	rbm12b	97	63.667	ENSPREG00000020770	rbm12b	93	63.667	Poecilia_reticulata
ENSACIG00000014943	rbm12b	97	30.986	ENSPREG00000018608	zgc:153215	70	30.702	Poecilia_reticulata
ENSACIG00000014943	rbm12b	99	39.683	ENSPCOG00000023546	RBM12B	57	39.024	Propithecus_coquereli
ENSACIG00000014943	rbm12b	99	41.009	ENSPVAG00000011803	RBM12B	52	40.535	Pteropus_vampyrus
ENSACIG00000014943	rbm12b	97	31.935	ENSPNYG00000018125	zgc:153215	99	31.235	Pundamilia_nyererei
ENSACIG00000014943	rbm12b	98	82.886	ENSPNYG00000016696	rbm12b	86	78.197	Pundamilia_nyererei
ENSACIG00000014943	rbm12b	96	57.143	ENSPNAG00000025628	zgc:153215	76	57.143	Pygocentrus_nattereri
ENSACIG00000014943	rbm12b	97	67.568	ENSPNAG00000008126	rbm12b	74	48.466	Pygocentrus_nattereri
ENSACIG00000014943	rbm12b	98	40.557	ENSRNOG00000055292	LOC679087	63	41.176	Rattus_norvegicus
ENSACIG00000014943	rbm12b	99	39.077	ENSRNOG00000016330	Rbm12b	65	38.462	Rattus_norvegicus
ENSACIG00000014943	rbm12b	99	40.127	ENSRBIG00000035046	RBM12B	71	40.127	Rhinopithecus_bieti
ENSACIG00000014943	rbm12b	99	40.127	ENSRROG00000023660	RBM12B	58	40.246	Rhinopithecus_roxellana
ENSACIG00000014943	rbm12b	99	39.490	ENSSBOG00000027592	RBM12B	61	39.490	Saimiri_boliviensis_boliviensis
ENSACIG00000014943	rbm12b	99	45.317	ENSSHAG00000015335	RBM12B	60	55.556	Sarcophilus_harrisii
ENSACIG00000014943	rbm12b	97	50.311	ENSSFOG00015001584	rbm12b	76	48.039	Scleropages_formosus
ENSACIG00000014943	rbm12b	97	35.514	ENSSFOG00015009427	zgc:153215	99	34.082	Scleropages_formosus
ENSACIG00000014943	rbm12b	97	68.333	ENSSMAG00000019708	rbm12b	93	68.333	Scophthalmus_maximus
ENSACIG00000014943	rbm12b	97	37.759	ENSSMAG00000019013	zgc:153215	86	37.759	Scophthalmus_maximus
ENSACIG00000014943	rbm12b	97	34.538	ENSSDUG00000012545	zgc:153215	87	34.538	Seriola_dumerili
ENSACIG00000014943	rbm12b	97	70.432	ENSSDUG00000006856	rbm12b	86	65.996	Seriola_dumerili
ENSACIG00000014943	rbm12b	97	70.432	ENSSLDG00000016156	rbm12b	94	70.432	Seriola_lalandi_dorsalis
ENSACIG00000014943	rbm12b	99	53.750	ENSSLDG00000013581	zgc:153215	78	38.255	Seriola_lalandi_dorsalis
ENSACIG00000014943	rbm12b	99	41.139	ENSSARG00000011845	-	66	40.041	Sorex_araneus
ENSACIG00000014943	rbm12b	99	38.776	ENSSPUG00000016954	RBM12B	91	40.116	Sphenodon_punctatus
ENSACIG00000014943	rbm12b	97	72.667	ENSSPAG00000006774	rbm12b	93	72.667	Stegastes_partitus
ENSACIG00000014943	rbm12b	97	35.816	ENSSPAG00000023584	zgc:153215	98	36.019	Stegastes_partitus
ENSACIG00000014943	rbm12b	99	39.458	ENSSSCG00000006110	RBM12B	57	40.246	Sus_scrofa
ENSACIG00000014943	rbm12b	99	44.377	ENSTGUG00000011860	RBM12B	96	41.141	Taeniopygia_guttata
ENSACIG00000014943	rbm12b	98	55.975	ENSTRUG00000013738	rbm12b	76	56.040	Takifugu_rubripes
ENSACIG00000014943	rbm12b	99	39.623	ENSTBEG00000000449	RBM12B	62	39.300	Tupaia_belangeri
ENSACIG00000014943	rbm12b	99	39.877	ENSUAMG00000023639	RBM12B	55	40.041	Ursus_americanus
ENSACIG00000014943	rbm12b	99	40.566	ENSUMAG00000016008	RBM12B	52	40.122	Ursus_maritimus
ENSACIG00000014943	rbm12b	99	40.566	ENSVVUG00000002694	RBM12B	55	40.530	Vulpes_vulpes
ENSACIG00000014943	rbm12b	96	36.054	ENSXETG00000014696	rbm12b	68	36.054	Xenopus_tropicalis
ENSACIG00000014943	rbm12b	97	40.667	ENSXETG00000014694	rbm12b	100	38.462	Xenopus_tropicalis
ENSACIG00000014943	rbm12b	98	30.769	ENSXETG00000025920	-	61	30.769	Xenopus_tropicalis
ENSACIG00000014943	rbm12b	97	30.499	ENSXCOG00000019654	zgc:153215	69	30.499	Xiphophorus_couchianus
ENSACIG00000014943	rbm12b	97	68.531	ENSXCOG00000019735	-	97	68.531	Xiphophorus_couchianus
ENSACIG00000014943	rbm12b	97	65.333	ENSXMAG00000014213	rbm12b	93	65.333	Xiphophorus_maculatus