EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000015047 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 44109 bases
Position: chrCCOE01000338.1:470754-514862
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000019446	XRN_N	PF03159.18	2.2e-91	1	1
ENSACIP00000019439	XRN_N	PF03159.18	6.7e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000019965	-	1635	-	ENSACIP00000019446	544 (aa)	-	-
ENSACIT00000019958	-	2781	-	ENSACIP00000019439	926 (aa)	-	-

Gene Model

Click here to download ENSACIG00000015047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000015047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000015047	xrn2	95	74.280	ENSG00000088930	XRN2	90	70.535	Homo_sapiens
ENSACIG00000015047	xrn2	95	90.192	ENSAPOG00000009818	xrn2	89	84.068	Acanthochromis_polyacanthus
ENSACIG00000015047	xrn2	95	74.664	ENSAMEG00000012581	XRN2	90	70.387	Ailuropoda_melanoleuca
ENSACIG00000015047	xrn2	95	91.346	ENSAOCG00000023632	xrn2	89	85.294	Amphiprion_ocellaris
ENSACIG00000015047	xrn2	95	91.154	ENSAPEG00000014871	xrn2	89	85.181	Amphiprion_percula
ENSACIG00000015047	xrn2	95	88.550	ENSATEG00000001273	xrn2	91	83.221	Anabas_testudineus
ENSACIG00000015047	xrn2	90	75.050	ENSAPLG00000013869	XRN2	90	70.292	Anas_platyrhynchos
ENSACIG00000015047	xrn2	95	73.714	ENSACAG00000005565	XRN2	90	70.475	Anolis_carolinensis
ENSACIG00000015047	xrn2	95	74.664	ENSANAG00000020126	XRN2	90	70.648	Aotus_nancymaae
ENSACIG00000015047	xrn2	95	89.655	ENSACLG00000010522	xrn2	95	89.655	Astatotilapia_calliptera
ENSACIG00000015047	xrn2	95	84.762	ENSAMXG00000018301	xrn2	91	79.101	Astyanax_mexicanus
ENSACIG00000015047	xrn2	95	74.856	ENSBTAG00000011304	XRN2	90	71.231	Bos_taurus
ENSACIG00000015047	xrn2	96	53.309	WBGene00006964	xrn-2	89	52.268	Caenorhabditis_elegans
ENSACIG00000015047	xrn2	95	74.664	ENSCJAG00000005611	XRN2	90	70.421	Callithrix_jacchus
ENSACIG00000015047	xrn2	95	74.664	ENSCAFG00000005185	XRN2	90	70.159	Canis_familiaris
ENSACIG00000015047	xrn2	95	74.664	ENSCAFG00020027479	XRN2	90	70.159	Canis_lupus_dingo
ENSACIG00000015047	xrn2	95	73.896	ENSCHIG00000006921	XRN2	90	70.656	Capra_hircus
ENSACIG00000015047	xrn2	95	74.664	ENSTSYG00000008315	XRN2	90	70.421	Carlito_syrichta
ENSACIG00000015047	xrn2	90	63.489	ENSCAPG00000010773	XRN2	88	61.105	Cavia_aperea
ENSACIG00000015047	xrn2	95	74.664	ENSCPOG00000009407	XRN2	90	71.104	Cavia_porcellus
ENSACIG00000015047	xrn2	95	74.280	ENSCATG00000040350	XRN2	91	70.421	Cercocebus_atys
ENSACIG00000015047	xrn2	95	75.048	ENSCLAG00000013419	XRN2	90	71.217	Chinchilla_lanigera
ENSACIG00000015047	xrn2	95	74.280	ENSCSAG00000011094	XRN2	90	70.421	Chlorocebus_sabaeus
ENSACIG00000015047	xrn2	61	88.172	ENSCHOG00000013404	XRN2	63	88.172	Choloepus_hoffmanni
ENSACIG00000015047	xrn2	95	75.717	ENSCPBG00000023533	XRN2	90	71.202	Chrysemys_picta_bellii
ENSACIG00000015047	xrn2	91	63.673	ENSCING00000022336	-	100	59.053	Ciona_intestinalis
ENSACIG00000015047	xrn2	96	58.824	ENSCSAVG00000011217	-	95	66.827	Ciona_savignyi
ENSACIG00000015047	xrn2	95	74.280	ENSCANG00000040240	XRN2	90	70.421	Colobus_angolensis_palliatus
ENSACIG00000015047	xrn2	95	75.240	ENSCGRG00001010676	Xrn2	92	71.331	Cricetulus_griseus_chok1gshd
ENSACIG00000015047	xrn2	90	74.343	ENSCGRG00000006378	Xrn2	89	70.012	Cricetulus_griseus_crigri
ENSACIG00000015047	xrn2	94	80.934	ENSCSEG00000005628	xrn2	100	80.777	Cynoglossus_semilaevis
ENSACIG00000015047	xrn2	95	89.313	ENSCVAG00000018999	xrn2	98	89.504	Cyprinodon_variegatus
ENSACIG00000015047	xrn2	97	82.959	ENSDARG00000101900	xrn2	99	82.959	Danio_rerio
ENSACIG00000015047	xrn2	95	74.472	ENSDNOG00000001895	XRN2	90	70.648	Dasypus_novemcinctus
ENSACIG00000015047	xrn2	95	74.472	ENSDORG00000005434	Xrn2	90	71.231	Dipodomys_ordii
ENSACIG00000015047	xrn2	85	61.407	FBgn0031868	Rat1	97	50.273	Drosophila_melanogaster
ENSACIG00000015047	xrn2	95	65.318	ENSETEG00000001740	XRN2	90	61.003	Echinops_telfairi
ENSACIG00000015047	xrn2	95	70.467	ENSEBUG00000016136	xrn2	100	67.233	Eptatretus_burgeri
ENSACIG00000015047	xrn2	95	74.856	ENSEASG00005002484	XRN2	89	71.330	Equus_asinus_asinus
ENSACIG00000015047	xrn2	87	92.308	ENSECAG00000018988	XRN2	85	92.308	Equus_caballus
ENSACIG00000015047	xrn2	73	96.000	ENSEEUG00000009265	XRN2	62	96.000	Erinaceus_europaeus
ENSACIG00000015047	xrn2	95	84.030	ENSELUG00000000552	xrn2	88	78.846	Esox_lucius
ENSACIG00000015047	xrn2	95	74.664	ENSFCAG00000007970	XRN2	90	70.159	Felis_catus
ENSACIG00000015047	xrn2	95	75.915	ENSFALG00000004508	XRN2	90	70.924	Ficedula_albicollis
ENSACIG00000015047	xrn2	95	74.664	ENSFDAG00000016311	XRN2	90	70.648	Fukomys_damarensis
ENSACIG00000015047	xrn2	95	81.574	ENSFHEG00000013039	xrn2	98	81.731	Fundulus_heteroclitus
ENSACIG00000015047	xrn2	99	74.101	ENSGMOG00000013436	xrn2	100	75.899	Gadus_morhua
ENSACIG00000015047	xrn2	95	75.816	ENSGALG00000008372	XRN2	90	71.185	Gallus_gallus
ENSACIG00000015047	xrn2	95	87.429	ENSGAFG00000014284	xrn2	99	81.900	Gambusia_affinis
ENSACIG00000015047	xrn2	94	86.074	ENSGACG00000011870	xrn2	96	85.907	Gasterosteus_aculeatus
ENSACIG00000015047	xrn2	95	75.526	ENSGAGG00000004884	XRN2	90	71.104	Gopherus_agassizii
ENSACIG00000015047	xrn2	95	74.280	ENSGGOG00000013738	XRN2	90	70.421	Gorilla_gorilla
ENSACIG00000015047	xrn2	95	89.464	ENSHBUG00000005077	xrn2	95	89.464	Haplochromis_burtoni
ENSACIG00000015047	xrn2	95	72.937	ENSHGLG00000014831	XRN2	90	69.852	Heterocephalus_glaber_female
ENSACIG00000015047	xrn2	95	72.937	ENSHGLG00100013130	XRN2	90	69.852	Heterocephalus_glaber_male
ENSACIG00000015047	xrn2	95	85.851	ENSHCOG00000011994	xrn2	95	76.629	Hippocampus_comes
ENSACIG00000015047	xrn2	95	85.143	ENSIPUG00000006639	xrn2	96	75.761	Ictalurus_punctatus
ENSACIG00000015047	xrn2	95	74.472	ENSSTOG00000000589	XRN2	90	70.421	Ictidomys_tridecemlineatus
ENSACIG00000015047	xrn2	95	75.287	ENSJJAG00000022128	Xrn2	90	71.136	Jaculus_jaculus
ENSACIG00000015047	xrn2	94	85.880	ENSLBEG00000010041	xrn2	100	85.907	Labrus_bergylta
ENSACIG00000015047	xrn2	92	74.803	ENSLACG00000008307	XRN2	97	72.963	Latimeria_chalumnae
ENSACIG00000015047	xrn2	95	79.507	ENSLOCG00000016874	xrn2	91	78.021	Lepisosteus_oculatus
ENSACIG00000015047	xrn2	95	74.856	ENSLAFG00000014624	XRN2	90	70.762	Loxodonta_africana
ENSACIG00000015047	xrn2	95	74.280	ENSMFAG00000038122	XRN2	90	70.421	Macaca_fascicularis
ENSACIG00000015047	xrn2	95	74.280	ENSMMUG00000011405	XRN2	90	70.421	Macaca_mulatta
ENSACIG00000015047	xrn2	95	74.280	ENSMNEG00000040626	XRN2	90	70.421	Macaca_nemestrina
ENSACIG00000015047	xrn2	95	74.088	ENSMLEG00000041897	XRN2	90	70.307	Mandrillus_leucophaeus
ENSACIG00000015047	xrn2	95	88.168	ENSMAMG00000008633	xrn2	90	83.446	Mastacembelus_armatus
ENSACIG00000015047	xrn2	95	92.131	ENSMZEG00005022362	xrn2	98	86.981	Maylandia_zebra
ENSACIG00000015047	xrn2	95	75.000	ENSMGAG00000003196	XRN2	90	70.455	Meleagris_gallopavo
ENSACIG00000015047	xrn2	95	74.664	ENSMAUG00000021842	Xrn2	90	71.104	Mesocricetus_auratus
ENSACIG00000015047	xrn2	95	74.856	ENSMICG00000008126	XRN2	90	70.615	Microcebus_murinus
ENSACIG00000015047	xrn2	95	75.240	ENSMOCG00000012588	Xrn2	90	71.266	Microtus_ochrogaster
ENSACIG00000015047	xrn2	95	87.214	ENSMMOG00000017576	xrn2	96	83.429	Mola_mola
ENSACIG00000015047	xrn2	95	74.952	ENSMODG00000006163	XRN2	90	70.387	Monodelphis_domestica
ENSACIG00000015047	xrn2	95	89.313	ENSMALG00000011355	xrn2	95	89.655	Monopterus_albus
ENSACIG00000015047	xrn2	95	75.048	MGP_CAROLIEiJ_G0024400	Xrn2	90	71.071	Mus_caroli
ENSACIG00000015047	xrn2	95	75.048	ENSMUSG00000027433	Xrn2	90	70.957	Mus_musculus
ENSACIG00000015047	xrn2	95	75.048	MGP_PahariEiJ_G0025843	Xrn2	90	70.843	Mus_pahari
ENSACIG00000015047	xrn2	95	75.048	MGP_SPRETEiJ_G0025318	Xrn2	94	82.727	Mus_spretus
ENSACIG00000015047	xrn2	95	74.664	ENSMPUG00000001198	XRN2	84	68.750	Mustela_putorius_furo
ENSACIG00000015047	xrn2	95	74.808	ENSMLUG00000001536	XRN2	90	70.615	Myotis_lucifugus
ENSACIG00000015047	xrn2	95	75.240	ENSNGAG00000018138	Xrn2	90	71.217	Nannospalax_galili
ENSACIG00000015047	xrn2	95	92.500	ENSNBRG00000008062	xrn2	98	87.191	Neolamprologus_brichardi
ENSACIG00000015047	xrn2	95	74.280	ENSNLEG00000009991	XRN2	90	70.421	Nomascus_leucogenys
ENSACIG00000015047	xrn2	52	88.889	ENSMEUG00000008622	-	53	88.889	Notamacropus_eugenii
ENSACIG00000015047	xrn2	62	72.632	ENSOPRG00000001397	-	63	72.632	Ochotona_princeps
ENSACIG00000015047	xrn2	95	74.664	ENSODEG00000010745	-	90	70.762	Octodon_degus
ENSACIG00000015047	xrn2	92	68.173	ENSODEG00000000860	-	91	65.308	Octodon_degus
ENSACIG00000015047	xrn2	95	91.538	ENSONIG00000018720	xrn2	89	85.488	Oreochromis_niloticus
ENSACIG00000015047	xrn2	95	74.904	ENSOANG00000015673	XRN2	90	70.501	Ornithorhynchus_anatinus
ENSACIG00000015047	xrn2	95	74.664	ENSOCUG00000013468	XRN2	90	70.876	Oryctolagus_cuniculus
ENSACIG00000015047	xrn2	95	86.882	ENSORLG00000017213	xrn2	97	82.106	Oryzias_latipes
ENSACIG00000015047	xrn2	95	86.882	ENSORLG00020001824	xrn2	91	81.941	Oryzias_latipes_hni
ENSACIG00000015047	xrn2	95	86.502	ENSORLG00015019747	xrn2	91	81.736	Oryzias_latipes_hsok
ENSACIG00000015047	xrn2	95	86.641	ENSOMEG00000019820	xrn2	89	81.623	Oryzias_melastigma
ENSACIG00000015047	xrn2	95	74.856	ENSOGAG00000001068	XRN2	90	70.615	Otolemur_garnettii
ENSACIG00000015047	xrn2	90	72.929	ENSOARG00000004443	XRN2	90	69.402	Ovis_aries
ENSACIG00000015047	xrn2	95	74.280	ENSPPAG00000033549	XRN2	90	70.421	Pan_paniscus
ENSACIG00000015047	xrn2	95	74.664	ENSPPRG00000008732	XRN2	90	70.159	Panthera_pardus
ENSACIG00000015047	xrn2	90	73.737	ENSPTIG00000015683	XRN2	87	69.484	Panthera_tigris_altaica
ENSACIG00000015047	xrn2	95	74.280	ENSPTRG00000013308	XRN2	90	70.421	Pan_troglodytes
ENSACIG00000015047	xrn2	95	74.280	ENSPANG00000018088	XRN2	90	70.421	Papio_anubis
ENSACIG00000015047	xrn2	95	81.559	ENSPKIG00000016889	xrn2	90	76.543	Paramormyrops_kingsleyae
ENSACIG00000015047	xrn2	85	74.364	ENSPSIG00000014666	XRN2	100	72.494	Pelodiscus_sinensis
ENSACIG00000015047	xrn2	95	75.432	ENSPEMG00000000111	Xrn2	90	71.445	Peromyscus_maniculatus_bairdii
ENSACIG00000015047	xrn2	60	69.940	ENSPMAG00000002576	xrn2	98	69.940	Petromyzon_marinus
ENSACIG00000015047	xrn2	95	86.857	ENSPFOG00000004182	xrn2	90	81.194	Poecilia_formosa
ENSACIG00000015047	xrn2	95	87.048	ENSPLAG00000007351	xrn2	97	81.561	Poecilia_latipinna
ENSACIG00000015047	xrn2	85	85.563	ENSPMEG00000011798	xrn2	90	79.976	Poecilia_mexicana
ENSACIG00000015047	xrn2	95	87.238	ENSPREG00000012452	xrn2	97	80.947	Poecilia_reticulata
ENSACIG00000015047	xrn2	95	74.280	ENSPPYG00000010755	XRN2	90	70.193	Pongo_abelii
ENSACIG00000015047	xrn2	95	74.856	ENSPCAG00000011191	XRN2	90	66.893	Procavia_capensis
ENSACIG00000015047	xrn2	95	65.835	ENSPCOG00000016468	XRN2	89	65.783	Propithecus_coquereli
ENSACIG00000015047	xrn2	95	61.612	ENSPVAG00000004596	XRN2	83	63.571	Pteropus_vampyrus
ENSACIG00000015047	xrn2	95	89.060	ENSPNYG00000001765	xrn2	98	85.185	Pundamilia_nyererei
ENSACIG00000015047	xrn2	95	83.302	ENSPNAG00000010956	xrn2	91	78.716	Pygocentrus_nattereri
ENSACIG00000015047	xrn2	95	75.240	ENSRNOG00000011785	Xrn2	90	71.445	Rattus_norvegicus
ENSACIG00000015047	xrn2	95	74.280	ENSRBIG00000036193	XRN2	100	72.672	Rhinopithecus_bieti
ENSACIG00000015047	xrn2	95	74.280	ENSRROG00000044400	XRN2	81	70.421	Rhinopithecus_roxellana
ENSACIG00000015047	xrn2	81	49.781	YOR048C	RAT1	64	52.068	Saccharomyces_cerevisiae
ENSACIG00000015047	xrn2	95	74.664	ENSSBOG00000021014	XRN2	90	70.648	Saimiri_boliviensis_boliviensis
ENSACIG00000015047	xrn2	95	83.840	ENSSFOG00015001091	xrn2	90	78.702	Scleropages_formosus
ENSACIG00000015047	xrn2	95	88.910	ENSSMAG00000007834	xrn2	89	82.486	Scophthalmus_maximus
ENSACIG00000015047	xrn2	95	87.332	ENSSDUG00000012802	xrn2	99	82.227	Seriola_dumerili
ENSACIG00000015047	xrn2	95	89.695	ENSSLDG00000021273	xrn2	98	83.446	Seriola_lalandi_dorsalis
ENSACIG00000015047	xrn2	64	96.000	ENSSARG00000005859	-	62	96.000	Sorex_araneus
ENSACIG00000015047	xrn2	95	76.392	ENSSPUG00000005485	XRN2	88	68.757	Sphenodon_punctatus
ENSACIG00000015047	xrn2	95	90.962	ENSSPAG00000016027	xrn2	89	84.842	Stegastes_partitus
ENSACIG00000015047	xrn2	95	74.472	ENSSSCG00000007109	XRN2	90	69.301	Sus_scrofa
ENSACIG00000015047	xrn2	95	74.280	ENSTGUG00000007535	XRN2	90	70.080	Taeniopygia_guttata
ENSACIG00000015047	xrn2	95	85.496	ENSTRUG00000015489	xrn2	88	80.405	Takifugu_rubripes
ENSACIG00000015047	xrn2	95	84.291	ENSTNIG00000010712	xrn2	90	80.385	Tetraodon_nigroviridis
ENSACIG00000015047	xrn2	95	74.664	ENSTBEG00000004119	XRN2	90	70.876	Tupaia_belangeri
ENSACIG00000015047	xrn2	95	74.088	ENSTTRG00000009087	XRN2	83	75.532	Tursiops_truncatus
ENSACIG00000015047	xrn2	95	74.664	ENSUAMG00000024634	XRN2	96	82.282	Ursus_americanus
ENSACIG00000015047	xrn2	90	73.737	ENSUMAG00000004012	XRN2	85	69.601	Ursus_maritimus
ENSACIG00000015047	xrn2	82	64.462	ENSVPAG00000010694	XRN2	81	64.462	Vicugna_pacos
ENSACIG00000015047	xrn2	95	74.664	ENSVVUG00000012178	XRN2	90	70.273	Vulpes_vulpes
ENSACIG00000015047	xrn2	95	77.927	ENSXETG00000023501	xrn2	91	72.654	Xenopus_tropicalis
ENSACIG00000015047	xrn2	95	88.145	ENSXMAG00000000242	xrn2	92	85.437	Xiphophorus_maculatus