EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000015117 (Gene tree)
Gene ID: -
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 19173 bases
Position: chrCCOE01000268.1:567912-587084
Accession: ZDB-GENE-040426-2854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000019473	rRNA_proc-arch	PF13234.6	1.3e-86	1	1
ENSACIP00000019473	DEAD	PF00270.29	9.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000019992	-	2985	-	ENSACIP00000019473	994 (aa)	-	-

Gene Model

Click here to download ENSACIG00000015117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000015117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000015117	mtrex	93	35.031	ENSACIG00000016719	skiv2l	77	35.447

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000015117	mtrex	96	87.879	ENSG00000039123	MTREX	91	87.879	Homo_sapiens
ENSACIG00000015117	mtrex	100	90.453	ENSAPOG00000007814	mtrex	100	90.646	Acanthochromis_polyacanthus
ENSACIG00000015117	mtrex	96	87.787	ENSAMEG00000013856	MTREX	91	87.787	Ailuropoda_melanoleuca
ENSACIG00000015117	mtrex	100	90.743	ENSAOCG00000011884	mtrex	100	90.743	Amphiprion_ocellaris
ENSACIG00000015117	mtrex	100	90.453	ENSAPEG00000019384	mtrex	100	90.646	Amphiprion_percula
ENSACIG00000015117	mtrex	100	90.251	ENSATEG00000015117	mtrex	100	90.347	Anabas_testudineus
ENSACIG00000015117	mtrex	96	87.448	ENSAPLG00000009694	MTREX	96	87.448	Anas_platyrhynchos
ENSACIG00000015117	mtrex	100	82.646	ENSACAG00000015200	MTREX	96	82.646	Anolis_carolinensis
ENSACIG00000015117	mtrex	96	87.983	ENSANAG00000023095	MTREX	94	87.983	Aotus_nancymaae
ENSACIG00000015117	mtrex	100	92.189	ENSACLG00000001921	mtrex	100	92.189	Astatotilapia_calliptera
ENSACIG00000015117	mtrex	95	85.891	ENSAMXG00000018751	mtrex	99	84.397	Astyanax_mexicanus
ENSACIG00000015117	mtrex	100	82.184	ENSBTAG00000010518	MTREX	100	82.184	Bos_taurus
ENSACIG00000015117	mtrex	94	53.503	WBGene00012342	mtr-4	91	53.518	Caenorhabditis_elegans
ENSACIG00000015117	mtrex	96	87.983	ENSCJAG00000001773	MTREX	100	81.611	Callithrix_jacchus
ENSACIG00000015117	mtrex	96	87.983	ENSCAFG00000006818	MTREX	91	87.983	Canis_familiaris
ENSACIG00000015117	mtrex	96	87.983	ENSCAFG00020024352	MTREX	91	87.983	Canis_lupus_dingo
ENSACIG00000015117	mtrex	100	82.218	ENSCHIG00000024413	MTREX	100	82.218	Capra_hircus
ENSACIG00000015117	mtrex	89	91.131	ENSTSYG00000007389	MTREX	91	91.131	Carlito_syrichta
ENSACIG00000015117	mtrex	87	76.147	ENSCAPG00000008696	MTREX	91	75.917	Cavia_aperea
ENSACIG00000015117	mtrex	96	87.879	ENSCPOG00000009797	MTREX	91	87.879	Cavia_porcellus
ENSACIG00000015117	mtrex	96	87.983	ENSCCAG00000014177	MTREX	100	81.611	Cebus_capucinus
ENSACIG00000015117	mtrex	96	87.879	ENSCATG00000042153	MTREX	91	87.879	Cercocebus_atys
ENSACIG00000015117	mtrex	96	87.879	ENSCLAG00000006622	MTREX	91	87.879	Chinchilla_lanigera
ENSACIG00000015117	mtrex	96	84.062	ENSCSAG00000016445	MTREX	91	84.062	Chlorocebus_sabaeus
ENSACIG00000015117	mtrex	64	97.222	ENSCHOG00000010936	-	62	97.222	Choloepus_hoffmanni
ENSACIG00000015117	mtrex	100	83.044	ENSCPBG00000026551	MTREX	94	82.948	Chrysemys_picta_bellii
ENSACIG00000015117	mtrex	96	68.750	ENSCING00000003239	-	93	68.750	Ciona_intestinalis
ENSACIG00000015117	mtrex	96	68.158	ENSCSAVG00000009304	-	100	69.066	Ciona_savignyi
ENSACIG00000015117	mtrex	96	87.879	ENSCANG00000035770	MTREX	91	87.879	Colobus_angolensis_palliatus
ENSACIG00000015117	mtrex	96	88.088	ENSCGRG00001024680	Mtrex	100	82.201	Cricetulus_griseus_chok1gshd
ENSACIG00000015117	mtrex	96	88.088	ENSCGRG00000000307	Mtrex	100	82.201	Cricetulus_griseus_crigri
ENSACIG00000015117	mtrex	100	89.331	ENSCSEG00000018621	mtrex	100	89.428	Cynoglossus_semilaevis
ENSACIG00000015117	mtrex	100	90.550	ENSCVAG00000004556	mtrex	100	90.646	Cyprinodon_variegatus
ENSACIG00000015117	mtrex	100	84.913	ENSDARG00000013457	mtrex	100	84.913	Danio_rerio
ENSACIG00000015117	mtrex	96	87.879	ENSDNOG00000015375	MTREX	91	87.879	Dasypus_novemcinctus
ENSACIG00000015117	mtrex	96	87.879	ENSDORG00000006782	Mtrex	100	82.139	Dipodomys_ordii
ENSACIG00000015117	mtrex	94	66.914	FBgn0001986	Mtr4	89	66.914	Drosophila_melanogaster
ENSACIG00000015117	mtrex	84	74.919	ENSETEG00000000727	MTREX	80	74.919	Echinops_telfairi
ENSACIG00000015117	mtrex	96	77.092	ENSEBUG00000012869	mtrex	92	77.092	Eptatretus_burgeri
ENSACIG00000015117	mtrex	96	87.866	ENSEASG00005013270	MTREX	91	87.866	Equus_asinus_asinus
ENSACIG00000015117	mtrex	96	87.971	ENSECAG00000023723	MTREX	90	89.767	Equus_caballus
ENSACIG00000015117	mtrex	94	79.574	ENSEEUG00000000527	MTREX	91	79.574	Erinaceus_europaeus
ENSACIG00000015117	mtrex	100	86.760	ENSELUG00000004898	mtrex	100	90.756	Esox_lucius
ENSACIG00000015117	mtrex	96	87.983	ENSFCAG00000010575	MTREX	91	87.983	Felis_catus
ENSACIG00000015117	mtrex	96	87.343	ENSFALG00000010850	MTREX	100	82.081	Ficedula_albicollis
ENSACIG00000015117	mtrex	100	81.801	ENSFDAG00000011199	MTREX	100	81.801	Fukomys_damarensis
ENSACIG00000015117	mtrex	100	91.139	ENSFHEG00000023014	mtrex	100	91.237	Fundulus_heteroclitus
ENSACIG00000015117	mtrex	100	84.399	ENSGMOG00000014702	mtrex	100	84.578	Gadus_morhua
ENSACIG00000015117	mtrex	100	82.769	ENSGALG00000014709	MTREX	86	82.769	Gallus_gallus
ENSACIG00000015117	mtrex	100	93.474	ENSGAFG00000012425	mtrex	100	93.675	Gambusia_affinis
ENSACIG00000015117	mtrex	100	85.814	ENSGACG00000016260	mtrex	100	85.010	Gasterosteus_aculeatus
ENSACIG00000015117	mtrex	100	83.044	ENSGAGG00000020036	MTREX	100	82.948	Gopherus_agassizii
ENSACIG00000015117	mtrex	96	87.879	ENSGGOG00000001867	MTREX	91	87.879	Gorilla_gorilla
ENSACIG00000015117	mtrex	100	92.189	ENSHBUG00000006229	mtrex	100	92.189	Haplochromis_burtoni
ENSACIG00000015117	mtrex	96	87.670	ENSHGLG00000019445	SKIV2L2	92	87.670	Heterocephalus_glaber_female
ENSACIG00000015117	mtrex	96	87.670	ENSHGLG00100011833	SKIV2L2	92	87.670	Heterocephalus_glaber_male
ENSACIG00000015117	mtrex	95	89.806	ENSHCOG00000019995	mtrex	100	89.806	Hippocampus_comes
ENSACIG00000015117	mtrex	96	88.819	ENSIPUG00000024348	skiv2l2	100	83.977	Ictalurus_punctatus
ENSACIG00000015117	mtrex	96	87.774	ENSSTOG00000010802	MTREX	91	87.774	Ictidomys_tridecemlineatus
ENSACIG00000015117	mtrex	96	82.600	ENSJJAG00000020975	Mtrex	100	77.531	Jaculus_jaculus
ENSACIG00000015117	mtrex	100	92.907	ENSKMAG00000012642	mtrex	100	93.207	Kryptolebias_marmoratus
ENSACIG00000015117	mtrex	100	89.778	ENSLBEG00000019367	mtrex	99	93.043	Labrus_bergylta
ENSACIG00000015117	mtrex	100	83.607	ENSLACG00000009075	MTREX	100	83.607	Latimeria_chalumnae
ENSACIG00000015117	mtrex	100	83.992	ENSLOCG00000010186	mtrex	100	83.992	Lepisosteus_oculatus
ENSACIG00000015117	mtrex	99	80.096	ENSLAFG00000010497	MTREX	100	80.096	Loxodonta_africana
ENSACIG00000015117	mtrex	96	87.879	ENSMFAG00000031610	MTREX	91	87.879	Macaca_fascicularis
ENSACIG00000015117	mtrex	96	87.774	ENSMMUG00000010379	MTREX	91	87.774	Macaca_mulatta
ENSACIG00000015117	mtrex	96	87.879	ENSMNEG00000032746	MTREX	91	87.879	Macaca_nemestrina
ENSACIG00000015117	mtrex	96	87.879	ENSMLEG00000041051	MTREX	91	87.879	Mandrillus_leucophaeus
ENSACIG00000015117	mtrex	100	94.774	ENSMAMG00000016753	mtrex	100	94.874	Mastacembelus_armatus
ENSACIG00000015117	mtrex	100	92.189	ENSMZEG00005000414	mtrex	100	92.189	Maylandia_zebra
ENSACIG00000015117	mtrex	95	63.560	ENSMGAG00000003980	MTREX	96	63.560	Meleagris_gallopavo
ENSACIG00000015117	mtrex	96	87.983	ENSMAUG00000010727	Mtrex	92	87.983	Mesocricetus_auratus
ENSACIG00000015117	mtrex	96	88.088	ENSMICG00000012779	MTREX	100	82.051	Microcebus_murinus
ENSACIG00000015117	mtrex	96	87.983	ENSMOCG00000019886	Mtrex	91	87.983	Microtus_ochrogaster
ENSACIG00000015117	mtrex	100	92.693	ENSMMOG00000002476	mtrex	100	92.893	Mola_mola
ENSACIG00000015117	mtrex	100	82.064	ENSMODG00000019494	MTREX	100	82.353	Monodelphis_domestica
ENSACIG00000015117	mtrex	100	87.858	ENSMALG00000002917	mtrex	100	87.957	Monopterus_albus
ENSACIG00000015117	mtrex	96	87.565	MGP_CAROLIEiJ_G0018896	Mtrex	92	87.565	Mus_caroli
ENSACIG00000015117	mtrex	96	87.565	ENSMUSG00000016018	Mtrex	92	87.565	Mus_musculus
ENSACIG00000015117	mtrex	96	87.565	MGP_PahariEiJ_G0015967	Mtrex	92	87.565	Mus_pahari
ENSACIG00000015117	mtrex	96	87.565	MGP_SPRETEiJ_G0019775	Mtrex	92	87.565	Mus_spretus
ENSACIG00000015117	mtrex	96	87.983	ENSMPUG00000007619	MTREX	91	87.983	Mustela_putorius_furo
ENSACIG00000015117	mtrex	96	87.396	ENSMLUG00000001152	MTREX	92	87.396	Myotis_lucifugus
ENSACIG00000015117	mtrex	96	87.774	ENSNGAG00000011938	Mtrex	91	87.774	Nannospalax_galili
ENSACIG00000015117	mtrex	100	92.093	ENSNBRG00000011293	mtrex	100	92.093	Neolamprologus_brichardi
ENSACIG00000015117	mtrex	96	83.837	ENSNLEG00000001494	MTREX	91	83.837	Nomascus_leucogenys
ENSACIG00000015117	mtrex	82	96.078	ENSMEUG00000006496	-	83	96.078	Notamacropus_eugenii
ENSACIG00000015117	mtrex	96	73.563	ENSOPRG00000008009	MTREX	100	69.128	Ochotona_princeps
ENSACIG00000015117	mtrex	96	87.356	ENSODEG00000017234	MTREX	91	87.356	Octodon_degus
ENSACIG00000015117	mtrex	100	91.996	ENSONIG00000007587	mtrex	100	91.996	Oreochromis_niloticus
ENSACIG00000015117	mtrex	52	82.913	ENSOANG00000004885	-	99	82.913	Ornithorhynchus_anatinus
ENSACIG00000015117	mtrex	96	87.983	ENSOCUG00000004463	MTREX	100	82.280	Oryctolagus_cuniculus
ENSACIG00000015117	mtrex	100	89.286	ENSORLG00000005443	mtrex	100	89.479	Oryzias_latipes
ENSACIG00000015117	mtrex	98	92.559	ENSORLG00020006329	mtrex	98	92.661	Oryzias_latipes_hni
ENSACIG00000015117	mtrex	98	92.464	ENSORLG00015012924	mtrex	98	92.566	Oryzias_latipes_hsok
ENSACIG00000015117	mtrex	100	89.220	ENSOMEG00000008825	mtrex	100	89.220	Oryzias_melastigma
ENSACIG00000015117	mtrex	96	88.088	ENSOGAG00000002886	MTREX	100	82.505	Otolemur_garnettii
ENSACIG00000015117	mtrex	100	81.983	ENSOARG00000007764	MTREX	100	81.983	Ovis_aries
ENSACIG00000015117	mtrex	96	87.879	ENSPPAG00000039291	MTREX	91	87.879	Pan_paniscus
ENSACIG00000015117	mtrex	96	87.983	ENSPPRG00000019701	MTREX	91	87.983	Panthera_pardus
ENSACIG00000015117	mtrex	96	86.416	ENSPTIG00000009313	MTREX	91	86.416	Panthera_tigris_altaica
ENSACIG00000015117	mtrex	96	87.879	ENSPTRG00000016878	MTREX	91	87.879	Pan_troglodytes
ENSACIG00000015117	mtrex	96	87.774	ENSPANG00000009697	MTREX	91	87.774	Papio_anubis
ENSACIG00000015117	mtrex	100	85.271	ENSPKIG00000020833	mtrex	100	85.271	Paramormyrops_kingsleyae
ENSACIG00000015117	mtrex	100	83.205	ENSPSIG00000012150	MTREX	100	83.301	Pelodiscus_sinensis
ENSACIG00000015117	mtrex	100	90.396	ENSPMGG00000002582	mtrex	100	90.495	Periophthalmus_magnuspinnatus
ENSACIG00000015117	mtrex	95	64.467	ENSPMAG00000009668	mtrex	100	64.467	Petromyzon_marinus
ENSACIG00000015117	mtrex	95	87.487	ENSPCIG00000024730	MTREX	100	87.487	Phascolarctos_cinereus
ENSACIG00000015117	mtrex	79	94.162	ENSPFOG00000003141	mtrex	100	94.289	Poecilia_formosa
ENSACIG00000015117	mtrex	100	90.265	ENSPLAG00000021311	mtrex	100	90.364	Poecilia_latipinna
ENSACIG00000015117	mtrex	96	94.549	ENSPMEG00000010597	mtrex	99	94.759	Poecilia_mexicana
ENSACIG00000015117	mtrex	100	92.217	ENSPREG00000003089	mtrex	100	92.315	Poecilia_reticulata
ENSACIG00000015117	mtrex	94	87.660	ENSPPYG00000015469	MTREX	89	87.660	Pongo_abelii
ENSACIG00000015117	mtrex	90	74.419	ENSPCAG00000013120	MTREX	94	74.419	Procavia_capensis
ENSACIG00000015117	mtrex	95	81.871	ENSPCOG00000018092	MTREX	100	76.285	Propithecus_coquereli
ENSACIG00000015117	mtrex	96	87.879	ENSPVAG00000002445	MTREX	91	87.879	Pteropus_vampyrus
ENSACIG00000015117	mtrex	100	92.093	ENSPNYG00000006164	mtrex	100	92.093	Pundamilia_nyererei
ENSACIG00000015117	mtrex	100	85.572	ENSPNAG00000008794	mtrex	100	85.347	Pygocentrus_nattereri
ENSACIG00000015117	mtrex	95	87.182	ENSRNOG00000010125	Mtrex	88	87.182	Rattus_norvegicus
ENSACIG00000015117	mtrex	96	85.998	ENSRBIG00000034930	MTREX	91	85.998	Rhinopithecus_bieti
ENSACIG00000015117	mtrex	96	87.879	ENSRROG00000039895	MTREX	91	87.879	Rhinopithecus_roxellana
ENSACIG00000015117	mtrex	94	55.950	YJL050W	MTR4	89	55.846	Saccharomyces_cerevisiae
ENSACIG00000015117	mtrex	96	87.983	ENSSBOG00000026693	MTREX	100	81.611	Saimiri_boliviensis_boliviensis
ENSACIG00000015117	mtrex	96	87.448	ENSSHAG00000004600	MTREX	95	87.448	Sarcophilus_harrisii
ENSACIG00000015117	mtrex	100	86.706	ENSSFOG00015014355	skiv2l2	100	86.706	Scleropages_formosus
ENSACIG00000015117	mtrex	100	90.338	ENSSMAG00000007572	mtrex	100	90.531	Scophthalmus_maximus
ENSACIG00000015117	mtrex	100	93.465	ENSSDUG00000023789	mtrex	100	93.663	Seriola_dumerili
ENSACIG00000015117	mtrex	100	94.411	ENSSLDG00000006301	mtrex	100	94.611	Seriola_lalandi_dorsalis
ENSACIG00000015117	mtrex	96	87.749	ENSSARG00000008387	MTREX	91	87.749	Sorex_araneus
ENSACIG00000015117	mtrex	89	84.909	ENSSPUG00000007071	MTREX	96	84.909	Sphenodon_punctatus
ENSACIG00000015117	mtrex	100	90.560	ENSSPAG00000011319	mtrex	100	91.052	Stegastes_partitus
ENSACIG00000015117	mtrex	96	87.983	ENSSSCG00000016911	MTREX	91	87.983	Sus_scrofa
ENSACIG00000015117	mtrex	100	81.521	ENSTGUG00000002480	MTREX	100	81.521	Taeniopygia_guttata
ENSACIG00000015117	mtrex	99	90.361	ENSTRUG00000014571	mtrex	98	90.562	Takifugu_rubripes
ENSACIG00000015117	mtrex	91	75.548	ENSTBEG00000007769	MTREX	87	75.548	Tupaia_belangeri
ENSACIG00000015117	mtrex	96	87.670	ENSTTRG00000008678	MTREX	100	81.992	Tursiops_truncatus
ENSACIG00000015117	mtrex	96	87.879	ENSUAMG00000023061	MTREX	100	81.931	Ursus_americanus
ENSACIG00000015117	mtrex	96	87.174	ENSUMAG00000009373	MTREX	99	88.444	Ursus_maritimus
ENSACIG00000015117	mtrex	100	73.136	ENSVPAG00000011174	MTREX	100	73.136	Vicugna_pacos
ENSACIG00000015117	mtrex	96	88.088	ENSVVUG00000021337	MTREX	91	88.088	Vulpes_vulpes
ENSACIG00000015117	mtrex	100	82.995	ENSXETG00000032798	MTREX	100	82.995	Xenopus_tropicalis
ENSACIG00000015117	mtrex	100	92.757	ENSXMAG00000004799	mtrex	100	93.159	Xiphophorus_maculatus