EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000015175 (Gene tree)
Gene ID: -
Gene Symbol: csde1
Alias: fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name: cold shock domain containing E1%2C RNA-binding
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 3183 bases
Position: chrCCOE01001110.1:1023803-1026985
Accession: ZDB-GENE-030131-8623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000019537	CSD	PF00313.22	1.9e-34	1	3
ENSACIP00000019537	CSD	PF00313.22	1.9e-34	2	3
ENSACIP00000019537	CSD	PF00313.22	1.9e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000020059	-	1107	-	ENSACIP00000019537	369 (aa)	-	-

Gene Model

Click here to download ENSACIG00000015175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000015175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000015175	csde1	100	76.757	ENSG00000009307	CSDE1	94	93.750	Homo_sapiens
ENSACIG00000015175	csde1	100	93.243	ENSAPOG00000015538	csde1	91	92.246	Acanthochromis_polyacanthus
ENSACIG00000015175	csde1	100	75.405	ENSAMEG00000017129	CSDE1	85	75.405	Ailuropoda_melanoleuca
ENSACIG00000015175	csde1	100	93.243	ENSAOCG00000011510	csde1	90	93.243	Amphiprion_ocellaris
ENSACIG00000015175	csde1	100	93.243	ENSAPEG00000007194	csde1	91	93.243	Amphiprion_percula
ENSACIG00000015175	csde1	100	94.324	ENSATEG00000003864	csde1	90	94.324	Anabas_testudineus
ENSACIG00000015175	csde1	100	80.811	ENSAPLG00000008797	CSDE1	87	80.811	Anas_platyrhynchos
ENSACIG00000015175	csde1	100	80.541	ENSACAG00000003120	CSDE1	87	80.541	Anolis_carolinensis
ENSACIG00000015175	csde1	100	76.486	ENSANAG00000024665	CSDE1	92	76.991	Aotus_nancymaae
ENSACIG00000015175	csde1	99	55.263	ENSANAG00000028396	-	91	55.263	Aotus_nancymaae
ENSACIG00000015175	csde1	100	95.676	ENSACLG00000013296	csde1	90	95.676	Astatotilapia_calliptera
ENSACIG00000015175	csde1	99	84.595	ENSAMXG00000007436	csde1	90	84.595	Astyanax_mexicanus
ENSACIG00000015175	csde1	100	76.486	ENSBTAG00000000678	CSDE1	90	76.486	Bos_taurus
ENSACIG00000015175	csde1	100	76.486	ENSCJAG00000012565	CSDE1	86	76.486	Callithrix_jacchus
ENSACIG00000015175	csde1	100	77.027	ENSCAFG00000009618	CSDE1	87	77.027	Canis_familiaris
ENSACIG00000015175	csde1	100	77.027	ENSCAFG00020000481	CSDE1	90	77.027	Canis_lupus_dingo
ENSACIG00000015175	csde1	100	76.757	ENSCHIG00000017250	CSDE1	90	76.757	Capra_hircus
ENSACIG00000015175	csde1	100	77.027	ENSTSYG00000003747	CSDE1	91	77.027	Carlito_syrichta
ENSACIG00000015175	csde1	98	73.476	ENSCAPG00000015128	CSDE1	67	73.476	Cavia_aperea
ENSACIG00000015175	csde1	100	76.486	ENSCPOG00000040388	CSDE1	90	76.486	Cavia_porcellus
ENSACIG00000015175	csde1	100	76.486	ENSCCAG00000036794	CSDE1	92	76.549	Cebus_capucinus
ENSACIG00000015175	csde1	99	55.405	ENSCCAG00000030878	-	84	55.405	Cebus_capucinus
ENSACIG00000015175	csde1	99	55.924	ENSCCAG00000033677	-	94	55.924	Cebus_capucinus
ENSACIG00000015175	csde1	100	76.757	ENSCATG00000036962	CSDE1	87	76.757	Cercocebus_atys
ENSACIG00000015175	csde1	100	77.027	ENSCLAG00000006618	CSDE1	91	77.027	Chinchilla_lanigera
ENSACIG00000015175	csde1	100	76.757	ENSCSAG00000001658	CSDE1	86	76.757	Chlorocebus_sabaeus
ENSACIG00000015175	csde1	100	80.270	ENSCPBG00000016547	CSDE1	87	80.270	Chrysemys_picta_bellii
ENSACIG00000015175	csde1	99	43.490	ENSCING00000014465	-	87	43.490	Ciona_intestinalis
ENSACIG00000015175	csde1	99	43.370	ENSCSAVG00000008100	-	92	43.370	Ciona_savignyi
ENSACIG00000015175	csde1	100	76.757	ENSCANG00000035096	CSDE1	87	76.757	Colobus_angolensis_palliatus
ENSACIG00000015175	csde1	99	81.633	ENSCANG00000031069	-	91	81.633	Colobus_angolensis_palliatus
ENSACIG00000015175	csde1	100	76.757	ENSCGRG00001016833	-	91	76.757	Cricetulus_griseus_chok1gshd
ENSACIG00000015175	csde1	100	61.081	ENSCGRG00001014011	-	89	61.081	Cricetulus_griseus_chok1gshd
ENSACIG00000015175	csde1	100	91.525	ENSCGRG00000005831	-	85	91.525	Cricetulus_griseus_crigri
ENSACIG00000015175	csde1	99	71.622	ENSCGRG00000002225	-	89	71.622	Cricetulus_griseus_crigri
ENSACIG00000015175	csde1	100	90.270	ENSCSEG00000002620	csde1	90	90.270	Cynoglossus_semilaevis
ENSACIG00000015175	csde1	100	91.892	ENSCVAG00000001344	csde1	88	90.909	Cyprinodon_variegatus
ENSACIG00000015175	csde1	99	96.610	ENSDARG00000074758	csde1	91	96.610	Danio_rerio
ENSACIG00000015175	csde1	100	77.358	ENSDNOG00000010287	-	84	77.358	Dasypus_novemcinctus
ENSACIG00000015175	csde1	100	77.297	ENSDORG00000011609	Csde1	91	77.297	Dipodomys_ordii
ENSACIG00000015175	csde1	100	45.981	FBgn0263352	Unr	72	45.687	Drosophila_melanogaster
ENSACIG00000015175	csde1	99	61.351	ENSETEG00000013678	-	63	61.351	Echinops_telfairi
ENSACIG00000015175	csde1	100	68.293	ENSETEG00000006280	-	80	68.293	Echinops_telfairi
ENSACIG00000015175	csde1	99	55.586	ENSETEG00000007109	-	61	55.586	Echinops_telfairi
ENSACIG00000015175	csde1	99	81.967	ENSETEG00000002491	-	51	81.967	Echinops_telfairi
ENSACIG00000015175	csde1	100	57.520	ENSEBUG00000008647	csde1	93	54.478	Eptatretus_burgeri
ENSACIG00000015175	csde1	100	77.297	ENSEASG00005006284	CSDE1	91	77.297	Equus_asinus_asinus
ENSACIG00000015175	csde1	100	77.297	ENSECAG00000020885	CSDE1	92	77.297	Equus_caballus
ENSACIG00000015175	csde1	99	82.550	ENSEEUG00000006286	CSDE1	62	82.550	Erinaceus_europaeus
ENSACIG00000015175	csde1	100	86.022	ENSELUG00000015507	csde1	87	86.022	Esox_lucius
ENSACIG00000015175	csde1	100	77.027	ENSFCAG00000029266	CSDE1	90	77.027	Felis_catus
ENSACIG00000015175	csde1	100	80.000	ENSFALG00000003407	CSDE1	87	80.000	Ficedula_albicollis
ENSACIG00000015175	csde1	100	76.486	ENSFDAG00000007882	CSDE1	91	76.486	Fukomys_damarensis
ENSACIG00000015175	csde1	100	92.162	ENSFHEG00000010799	csde1	87	92.162	Fundulus_heteroclitus
ENSACIG00000015175	csde1	100	87.601	ENSGMOG00000012731	csde1	91	87.601	Gadus_morhua
ENSACIG00000015175	csde1	100	80.541	ENSGALG00000002139	CSDE1	88	80.541	Gallus_gallus
ENSACIG00000015175	csde1	100	92.432	ENSGAFG00000005241	csde1	90	92.432	Gambusia_affinis
ENSACIG00000015175	csde1	100	91.622	ENSGACG00000004544	csde1	90	91.622	Gasterosteus_aculeatus
ENSACIG00000015175	csde1	100	80.000	ENSGAGG00000017685	CSDE1	87	80.000	Gopherus_agassizii
ENSACIG00000015175	csde1	99	80.383	ENSGGOG00000002164	CSDE1	90	80.383	Gorilla_gorilla
ENSACIG00000015175	csde1	100	95.676	ENSHBUG00000020315	csde1	90	95.676	Haplochromis_burtoni
ENSACIG00000015175	csde1	99	76.923	ENSHGLG00000009620	-	69	76.923	Heterocephalus_glaber_female
ENSACIG00000015175	csde1	100	67.838	ENSHGLG00000008555	-	93	67.838	Heterocephalus_glaber_female
ENSACIG00000015175	csde1	98	69.006	ENSHGLG00000007471	-	65	69.006	Heterocephalus_glaber_female
ENSACIG00000015175	csde1	99	67.568	ENSHGLG00000010039	-	86	67.568	Heterocephalus_glaber_female
ENSACIG00000015175	csde1	99	62.338	ENSHGLG00000000650	-	63	62.338	Heterocephalus_glaber_female
ENSACIG00000015175	csde1	100	60.647	ENSHGLG00000019549	-	90	60.647	Heterocephalus_glaber_female
ENSACIG00000015175	csde1	99	71.585	ENSHGLG00000003829	-	90	71.585	Heterocephalus_glaber_female
ENSACIG00000015175	csde1	98	69.341	ENSHGLG00100007287	-	66	69.341	Heterocephalus_glaber_male
ENSACIG00000015175	csde1	100	76.757	ENSHGLG00100019438	-	91	76.757	Heterocephalus_glaber_male
ENSACIG00000015175	csde1	99	67.117	ENSHGLG00100006910	-	86	67.117	Heterocephalus_glaber_male
ENSACIG00000015175	csde1	99	70.468	ENSHGLG00100012072	-	87	70.468	Heterocephalus_glaber_male
ENSACIG00000015175	csde1	100	65.405	ENSHGLG00100004195	-	96	65.405	Heterocephalus_glaber_male
ENSACIG00000015175	csde1	99	70.645	ENSHGLG00100002245	-	65	70.645	Heterocephalus_glaber_male
ENSACIG00000015175	csde1	98	64.384	ENSHGLG00100004833	-	85	64.384	Heterocephalus_glaber_male
ENSACIG00000015175	csde1	100	56.757	ENSHGLG00100001846	-	90	56.757	Heterocephalus_glaber_male
ENSACIG00000015175	csde1	100	88.378	ENSHCOG00000004158	csde1	90	88.378	Hippocampus_comes
ENSACIG00000015175	csde1	100	83.871	ENSIPUG00000000355	csde1	87	83.871	Ictalurus_punctatus
ENSACIG00000015175	csde1	100	62.703	ENSSTOG00000030994	-	82	62.703	Ictidomys_tridecemlineatus
ENSACIG00000015175	csde1	99	59.561	ENSSTOG00000032722	-	75	59.561	Ictidomys_tridecemlineatus
ENSACIG00000015175	csde1	100	76.757	ENSJJAG00000019571	Csde1	91	76.757	Jaculus_jaculus
ENSACIG00000015175	csde1	100	92.183	ENSKMAG00000005685	csde1	88	91.200	Kryptolebias_marmoratus
ENSACIG00000015175	csde1	100	92.162	ENSLBEG00000014770	csde1	90	92.162	Labrus_bergylta
ENSACIG00000015175	csde1	100	81.622	ENSLACG00000018452	CSDE1	93	81.622	Latimeria_chalumnae
ENSACIG00000015175	csde1	100	84.595	ENSLOCG00000010413	csde1	85	84.595	Lepisosteus_oculatus
ENSACIG00000015175	csde1	100	76.757	ENSLAFG00000007150	CSDE1	86	76.757	Loxodonta_africana
ENSACIG00000015175	csde1	100	76.757	ENSMFAG00000003674	CSDE1	90	76.757	Macaca_fascicularis
ENSACIG00000015175	csde1	100	76.757	ENSMMUG00000001974	CSDE1	94	76.757	Macaca_mulatta
ENSACIG00000015175	csde1	100	76.757	ENSMNEG00000045247	CSDE1	87	76.757	Macaca_nemestrina
ENSACIG00000015175	csde1	100	76.757	ENSMLEG00000038673	CSDE1	86	76.757	Mandrillus_leucophaeus
ENSACIG00000015175	csde1	100	94.324	ENSMAMG00000008821	csde1	87	94.324	Mastacembelus_armatus
ENSACIG00000015175	csde1	100	95.676	ENSMZEG00005021675	csde1	90	95.676	Maylandia_zebra
ENSACIG00000015175	csde1	100	80.811	ENSMGAG00000016381	CSDE1	88	80.811	Meleagris_gallopavo
ENSACIG00000015175	csde1	100	76.757	ENSMAUG00000014031	Csde1	91	76.757	Mesocricetus_auratus
ENSACIG00000015175	csde1	100	76.486	ENSMICG00000002050	CSDE1	86	76.486	Microcebus_murinus
ENSACIG00000015175	csde1	100	76.757	ENSMOCG00000018960	Csde1	91	76.757	Microtus_ochrogaster
ENSACIG00000015175	csde1	100	94.324	ENSMMOG00000015075	csde1	90	94.324	Mola_mola
ENSACIG00000015175	csde1	100	78.378	ENSMODG00000004685	CSDE1	91	78.378	Monodelphis_domestica
ENSACIG00000015175	csde1	100	92.162	ENSMALG00000007132	csde1	90	92.162	Monopterus_albus
ENSACIG00000015175	csde1	89	91.026	MGP_CAROLIEiJ_G0025444	Csde1	94	91.026	Mus_caroli
ENSACIG00000015175	csde1	89	91.026	ENSMUSG00000068823	Csde1	94	91.026	Mus_musculus
ENSACIG00000015175	csde1	89	91.026	MGP_PahariEiJ_G0026888	Csde1	94	91.026	Mus_pahari
ENSACIG00000015175	csde1	89	91.026	MGP_SPRETEiJ_G0026394	Csde1	94	91.026	Mus_spretus
ENSACIG00000015175	csde1	100	77.027	ENSMPUG00000005753	CSDE1	92	77.027	Mustela_putorius_furo
ENSACIG00000015175	csde1	100	76.216	ENSMLUG00000005681	CSDE1	85	76.216	Myotis_lucifugus
ENSACIG00000015175	csde1	99	47.297	ENSNGAG00000012599	-	82	47.297	Nannospalax_galili
ENSACIG00000015175	csde1	100	76.486	ENSNGAG00000021929	Csde1	91	76.486	Nannospalax_galili
ENSACIG00000015175	csde1	100	95.676	ENSNBRG00000020808	csde1	90	95.676	Neolamprologus_brichardi
ENSACIG00000015175	csde1	99	80.383	ENSNLEG00000004842	CSDE1	90	80.383	Nomascus_leucogenys
ENSACIG00000015175	csde1	100	78.649	ENSMEUG00000002677	CSDE1	77	78.649	Notamacropus_eugenii
ENSACIG00000015175	csde1	99	68.259	ENSOPRG00000005002	CSDE1	59	68.259	Ochotona_princeps
ENSACIG00000015175	csde1	100	75.946	ENSODEG00000007383	-	91	75.946	Octodon_degus
ENSACIG00000015175	csde1	98	59.910	ENSODEG00000005979	-	71	59.910	Octodon_degus
ENSACIG00000015175	csde1	100	95.676	ENSONIG00000009309	csde1	90	95.676	Oreochromis_niloticus
ENSACIG00000015175	csde1	100	78.919	ENSOANG00000003346	-	69	78.919	Ornithorhynchus_anatinus
ENSACIG00000015175	csde1	100	76.486	ENSOCUG00000016438	CSDE1	86	76.486	Oryctolagus_cuniculus
ENSACIG00000015175	csde1	100	91.351	ENSORLG00000000707	csde1	88	91.351	Oryzias_latipes
ENSACIG00000015175	csde1	100	91.081	ENSORLG00020005148	csde1	90	91.081	Oryzias_latipes_hni
ENSACIG00000015175	csde1	100	91.081	ENSORLG00015019415	csde1	90	91.081	Oryzias_latipes_hsok
ENSACIG00000015175	csde1	100	91.081	ENSOMEG00000015656	csde1	90	91.081	Oryzias_melastigma
ENSACIG00000015175	csde1	100	76.757	ENSOGAG00000012127	CSDE1	85	76.757	Otolemur_garnettii
ENSACIG00000015175	csde1	100	76.757	ENSOARG00000020034	CSDE1	85	76.757	Ovis_aries
ENSACIG00000015175	csde1	99	80.383	ENSPPAG00000025861	CSDE1	90	80.383	Pan_paniscus
ENSACIG00000015175	csde1	100	77.027	ENSPPRG00000006747	CSDE1	86	77.027	Panthera_pardus
ENSACIG00000015175	csde1	100	77.027	ENSPTIG00000015468	CSDE1	91	77.027	Panthera_tigris_altaica
ENSACIG00000015175	csde1	99	80.383	ENSPTRG00000033721	CSDE1	90	80.383	Pan_troglodytes
ENSACIG00000015175	csde1	100	76.757	ENSPANG00000018873	CSDE1	90	76.757	Papio_anubis
ENSACIG00000015175	csde1	100	83.514	ENSPKIG00000009459	csde1	86	83.514	Paramormyrops_kingsleyae
ENSACIG00000015175	csde1	99	82.677	ENSPSIG00000003823	CSDE1	90	82.677	Pelodiscus_sinensis
ENSACIG00000015175	csde1	100	90.566	ENSPMGG00000000772	csde1	90	90.566	Periophthalmus_magnuspinnatus
ENSACIG00000015175	csde1	100	76.757	ENSPEMG00000020357	-	91	76.757	Peromyscus_maniculatus_bairdii
ENSACIG00000015175	csde1	100	78.649	ENSPCIG00000022587	CSDE1	91	78.649	Phascolarctos_cinereus
ENSACIG00000015175	csde1	100	91.892	ENSPFOG00000012664	csde1	89	91.892	Poecilia_formosa
ENSACIG00000015175	csde1	100	81.622	ENSPLAG00000017680	csde1	84	81.622	Poecilia_latipinna
ENSACIG00000015175	csde1	100	82.162	ENSPMEG00000005094	csde1	85	82.162	Poecilia_mexicana
ENSACIG00000015175	csde1	100	90.957	ENSPREG00000011631	csde1	88	90.000	Poecilia_reticulata
ENSACIG00000015175	csde1	100	76.757	ENSPPYG00000000996	CSDE1	91	76.757	Pongo_abelii
ENSACIG00000015175	csde1	100	77.027	ENSPCAG00000014368	CSDE1	71	77.027	Procavia_capensis
ENSACIG00000015175	csde1	99	73.333	ENSPCOG00000008223	-	90	73.333	Propithecus_coquereli
ENSACIG00000015175	csde1	100	77.027	ENSPCOG00000017893	CSDE1	91	77.027	Propithecus_coquereli
ENSACIG00000015175	csde1	100	75.946	ENSPVAG00000008225	CSDE1	82	75.946	Pteropus_vampyrus
ENSACIG00000015175	csde1	100	95.676	ENSPNYG00000013745	csde1	90	95.676	Pundamilia_nyererei
ENSACIG00000015175	csde1	99	85.405	ENSPNAG00000001958	csde1	90	85.405	Pygocentrus_nattereri
ENSACIG00000015175	csde1	100	76.757	ENSRNOG00000061058	Csde1	91	76.757	Rattus_norvegicus
ENSACIG00000015175	csde1	100	70.350	ENSRBIG00000038966	-	85	70.350	Rhinopithecus_bieti
ENSACIG00000015175	csde1	100	72.162	ENSRBIG00000038088	-	93	71.622	Rhinopithecus_bieti
ENSACIG00000015175	csde1	100	76.757	ENSRROG00000043101	CSDE1	87	76.757	Rhinopithecus_roxellana
ENSACIG00000015175	csde1	100	76.486	ENSSBOG00000035592	CSDE1	86	76.486	Saimiri_boliviensis_boliviensis
ENSACIG00000015175	csde1	100	78.649	ENSSHAG00000009831	CSDE1	90	78.649	Sarcophilus_harrisii
ENSACIG00000015175	csde1	100	83.558	ENSSFOG00015007498	csde1	88	82.667	Scleropages_formosus
ENSACIG00000015175	csde1	100	92.432	ENSSMAG00000007203	csde1	90	92.432	Scophthalmus_maximus
ENSACIG00000015175	csde1	100	94.324	ENSSDUG00000015380	csde1	90	94.324	Seriola_dumerili
ENSACIG00000015175	csde1	100	94.324	ENSSLDG00000008819	csde1	91	94.324	Seriola_lalandi_dorsalis
ENSACIG00000015175	csde1	100	75.946	ENSSARG00000000738	CSDE1	85	75.946	Sorex_araneus
ENSACIG00000015175	csde1	100	81.081	ENSSPUG00000008714	CSDE1	87	81.081	Sphenodon_punctatus
ENSACIG00000015175	csde1	100	93.784	ENSSPAG00000000716	csde1	90	93.784	Stegastes_partitus
ENSACIG00000015175	csde1	100	77.297	ENSSSCG00000006752	CSDE1	94	77.297	Sus_scrofa
ENSACIG00000015175	csde1	100	79.839	ENSTGUG00000000972	CSDE1	87	79.839	Taeniopygia_guttata
ENSACIG00000015175	csde1	100	87.568	ENSTRUG00000007996	csde1	90	87.568	Takifugu_rubripes
ENSACIG00000015175	csde1	99	100.000	ENSTNIG00000010878	csde1	91	100.000	Tetraodon_nigroviridis
ENSACIG00000015175	csde1	100	76.216	ENSTTRG00000015583	CSDE1	82	76.216	Tursiops_truncatus
ENSACIG00000015175	csde1	100	73.243	ENSUAMG00000024289	-	98	73.243	Ursus_americanus
ENSACIG00000015175	csde1	99	83.122	ENSUAMG00000021779	-	95	83.122	Ursus_americanus
ENSACIG00000015175	csde1	100	73.514	ENSUMAG00000009720	-	93	73.514	Ursus_maritimus
ENSACIG00000015175	csde1	99	69.072	ENSUMAG00000011714	-	87	69.072	Ursus_maritimus
ENSACIG00000015175	csde1	99	80.077	ENSVPAG00000000749	CSDE1	50	80.077	Vicugna_pacos
ENSACIG00000015175	csde1	100	77.027	ENSVVUG00000009890	CSDE1	74	77.027	Vulpes_vulpes
ENSACIG00000015175	csde1	100	79.839	ENSXETG00000021448	csde1	88	79.839	Xenopus_tropicalis
ENSACIG00000015175	csde1	99	93.127	ENSXCOG00000000035	csde1	72	93.127	Xiphophorus_couchianus
ENSACIG00000015175	csde1	100	92.432	ENSXMAG00000009080	csde1	88	91.444	Xiphophorus_maculatus