EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000015427 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162396 (1 of many)
Alias: fb62c07|si:ch211-31o18.2|wu:fb62c07
Full Name: zgc:162396
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4629 bases
Position: chrCCOE01001155.1:1178477-1183105
Accession: ZDB-GENE-030131-1190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000019851	Methyltransf_31	PF13847.6	2.7e-15	1	1
ENSACIP00000019851	Methyltransf_8	PF05148.15	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000020379	-	819	-	ENSACIP00000019851	272 (aa)	-	-

Gene Model

Click here to download ENSACIG00000015427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000015427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000015427	zgc:162396	60	51.829	ENSACIG00000024058	si:ch211-93g23.2	87	51.829
ENSACIG00000015427	zgc:162396	100	45.985	ENSACIG00000015409	zgc:162780	97	45.985

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000015427	zgc:162396	100	74.632	ENSAPOG00000015421	zgc:162396	100	74.632	Acanthochromis_polyacanthus
ENSACIG00000015427	zgc:162396	100	76.838	ENSAOCG00000004131	zgc:162396	100	76.838	Amphiprion_ocellaris
ENSACIG00000015427	zgc:162396	100	76.103	ENSAPEG00000008189	zgc:162396	100	76.103	Amphiprion_percula
ENSACIG00000015427	zgc:162396	100	72.059	ENSATEG00000011813	zgc:162396	99	72.059	Anabas_testudineus
ENSACIG00000015427	zgc:162396	97	44.151	ENSAPLG00000012593	-	98	44.151	Anas_platyrhynchos
ENSACIG00000015427	zgc:162396	100	85.662	ENSACLG00000006906	zgc:162396	100	85.662	Astatotilapia_calliptera
ENSACIG00000015427	zgc:162396	86	52.321	ENSAMXG00000037578	zgc:162396	93	52.743	Astyanax_mexicanus
ENSACIG00000015427	zgc:162396	100	61.765	ENSAMXG00000030552	zgc:162396	100	61.765	Astyanax_mexicanus
ENSACIG00000015427	zgc:162396	98	46.816	ENSCPBG00000002804	-	98	46.816	Chrysemys_picta_bellii
ENSACIG00000015427	zgc:162396	99	32.482	ENSCING00000012960	-	99	32.482	Ciona_intestinalis
ENSACIG00000015427	zgc:162396	76	30.806	ENSCING00000014393	-	90	30.806	Ciona_intestinalis
ENSACIG00000015427	zgc:162396	99	74.539	ENSCVAG00000021429	zgc:162396	99	74.539	Cyprinodon_variegatus
ENSACIG00000015427	zgc:162396	99	59.779	ENSDARG00000069549	zgc:162396	99	70.370	Danio_rerio
ENSACIG00000015427	zgc:162396	99	63.838	ENSELUG00000005372	zgc:162396	99	63.838	Esox_lucius
ENSACIG00000015427	zgc:162396	99	43.657	ENSFALG00000012826	-	99	43.657	Ficedula_albicollis
ENSACIG00000015427	zgc:162396	99	74.539	ENSFHEG00000005224	-	99	74.539	Fundulus_heteroclitus
ENSACIG00000015427	zgc:162396	99	43.284	ENSGALG00000050548	-	99	43.284	Gallus_gallus
ENSACIG00000015427	zgc:162396	99	43.284	ENSGALG00000042073	-	99	43.284	Gallus_gallus
ENSACIG00000015427	zgc:162396	99	43.284	ENSGALG00000047535	-	99	43.284	Gallus_gallus
ENSACIG00000015427	zgc:162396	100	73.897	ENSGAFG00000018387	-	100	73.897	Gambusia_affinis
ENSACIG00000015427	zgc:162396	99	74.908	ENSGACG00000002200	zgc:162396	96	74.908	Gasterosteus_aculeatus
ENSACIG00000015427	zgc:162396	100	85.294	ENSHBUG00000017584	zgc:162396	100	85.294	Haplochromis_burtoni
ENSACIG00000015427	zgc:162396	99	61.255	ENSIPUG00000001213	-	99	61.255	Ictalurus_punctatus
ENSACIG00000015427	zgc:162396	100	60.294	ENSIPUG00000001159	zgc:162396	100	60.294	Ictalurus_punctatus
ENSACIG00000015427	zgc:162396	100	61.029	ENSIPUG00000001171	-	100	61.029	Ictalurus_punctatus
ENSACIG00000015427	zgc:162396	99	74.170	ENSKMAG00000018426	-	99	74.170	Kryptolebias_marmoratus
ENSACIG00000015427	zgc:162396	100	74.632	ENSLBEG00000026502	zgc:162396	100	74.632	Labrus_bergylta
ENSACIG00000015427	zgc:162396	99	45.387	ENSLACG00000009261	-	99	45.387	Latimeria_chalumnae
ENSACIG00000015427	zgc:162396	100	74.632	ENSMAMG00000013213	zgc:162396	100	74.632	Mastacembelus_armatus
ENSACIG00000015427	zgc:162396	100	85.662	ENSMZEG00005000798	zgc:162396	100	85.662	Maylandia_zebra
ENSACIG00000015427	zgc:162396	98	43.704	ENSMGAG00000003269	-	98	43.704	Meleagris_gallopavo
ENSACIG00000015427	zgc:162396	99	64.945	ENSMMOG00000005445	zgc:162396	99	64.945	Mola_mola
ENSACIG00000015427	zgc:162396	100	84.559	ENSNBRG00000014954	zgc:162396	100	84.559	Neolamprologus_brichardi
ENSACIG00000015427	zgc:162396	100	85.662	ENSONIG00000004463	zgc:162396	100	85.662	Oreochromis_niloticus
ENSACIG00000015427	zgc:162396	64	42.529	ENSOANG00000015675	-	98	42.529	Ornithorhynchus_anatinus
ENSACIG00000015427	zgc:162396	99	45.896	ENSOANG00000021828	-	96	45.896	Ornithorhynchus_anatinus
ENSACIG00000015427	zgc:162396	63	64.912	ENSORLG00000018107	zgc:162396	98	64.912	Oryzias_latipes
ENSACIG00000015427	zgc:162396	99	69.373	ENSORLG00015008543	zgc:162396	99	69.373	Oryzias_latipes_hsok
ENSACIG00000015427	zgc:162396	99	70.480	ENSOMEG00000010640	zgc:162396	98	72.016	Oryzias_melastigma
ENSACIG00000015427	zgc:162396	99	61.940	ENSPKIG00000014798	zgc:162396	99	61.940	Paramormyrops_kingsleyae
ENSACIG00000015427	zgc:162396	99	43.657	ENSPSIG00000016701	-	99	43.657	Pelodiscus_sinensis
ENSACIG00000015427	zgc:162396	74	40.976	ENSPMAG00000006166	zgc:162396	100	40.976	Petromyzon_marinus
ENSACIG00000015427	zgc:162396	83	36.087	ENSPMAG00000004744	zgc:162396	97	36.087	Petromyzon_marinus
ENSACIG00000015427	zgc:162396	89	38.272	ENSPMAG00000003743	zgc:162396	99	38.272	Petromyzon_marinus
ENSACIG00000015427	zgc:162396	100	73.162	ENSPFOG00000002666	zgc:162396	100	73.162	Poecilia_formosa
ENSACIG00000015427	zgc:162396	100	73.529	ENSPLAG00000010281	zgc:162396	100	73.529	Poecilia_latipinna
ENSACIG00000015427	zgc:162396	100	73.529	ENSPMEG00000002349	zgc:162396	100	73.529	Poecilia_mexicana
ENSACIG00000015427	zgc:162396	100	73.897	ENSPREG00000016491	zgc:162396	100	73.897	Poecilia_reticulata
ENSACIG00000015427	zgc:162396	100	85.294	ENSPNYG00000009858	zgc:162396	100	85.294	Pundamilia_nyererei
ENSACIG00000015427	zgc:162396	100	62.500	ENSPNAG00000026074	zgc:162396	100	62.500	Pygocentrus_nattereri
ENSACIG00000015427	zgc:162396	99	60.517	ENSPNAG00000004920	zgc:162396	100	60.517	Pygocentrus_nattereri
ENSACIG00000015427	zgc:162396	99	35.379	ENSSHAG00000000950	-	98	35.379	Sarcophilus_harrisii
ENSACIG00000015427	zgc:162396	100	59.926	ENSSFOG00015023495	zgc:162396	100	59.926	Scleropages_formosus
ENSACIG00000015427	zgc:162396	99	59.410	ENSSFOG00015023503	zgc:162396	99	59.410	Scleropages_formosus
ENSACIG00000015427	zgc:162396	99	73.801	ENSSMAG00000004484	zgc:162396	99	73.801	Scophthalmus_maximus
ENSACIG00000015427	zgc:162396	100	75.368	ENSSDUG00000010278	zgc:162396	100	75.368	Seriola_dumerili
ENSACIG00000015427	zgc:162396	100	75.735	ENSSLDG00000021423	zgc:162396	100	75.735	Seriola_lalandi_dorsalis
ENSACIG00000015427	zgc:162396	99	44.403	ENSSPUG00000015532	-	83	44.403	Sphenodon_punctatus
ENSACIG00000015427	zgc:162396	99	74.170	ENSSPAG00000005505	zgc:162396	99	74.170	Stegastes_partitus
ENSACIG00000015427	zgc:162396	99	44.030	ENSTGUG00000003861	-	99	44.030	Taeniopygia_guttata
ENSACIG00000015427	zgc:162396	67	37.912	ENSTGUG00000015044	-	97	37.912	Taeniopygia_guttata
ENSACIG00000015427	zgc:162396	100	57.721	ENSTRUG00000010648	-	99	57.721	Takifugu_rubripes
ENSACIG00000015427	zgc:162396	99	65.428	ENSTRUG00000007506	zgc:162396	99	65.428	Takifugu_rubripes
ENSACIG00000015427	zgc:162396	99	62.132	ENSTNIG00000001485	zgc:162396	100	62.132	Tetraodon_nigroviridis
ENSACIG00000015427	zgc:162396	99	39.852	ENSXETG00000033236	-	97	39.852	Xenopus_tropicalis
ENSACIG00000015427	zgc:162396	100	73.897	ENSXCOG00000014529	zgc:162396	100	73.897	Xiphophorus_couchianus
ENSACIG00000015427	zgc:162396	100	75.368	ENSXMAG00000023129	zgc:162396	100	75.368	Xiphophorus_maculatus