EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000015799 (Gene tree)
Gene ID: -
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 3509 bases
Position: chrCCOE01001229.1:1010402-1013910
Accession: ZDB-GENE-061110-91
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000020326	MMR_HSR1	PF01926.23	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000020862	-	1356	-	ENSACIP00000020326	451 (aa)	-	-

Gene Model

Click here to download ENSACIG00000015799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000015799's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000015799	srl	99	75.670	ENSACIG00000015419	SRL	99	75.670
ENSACIG00000015799	srl	91	33.413	ENSACIG00000024056	bicra	74	33.253
ENSACIG00000015799	srl	56	38.189	ENSACIG00000011074	-	75	30.260
ENSACIG00000015799	srl	82	33.244	ENSACIG00000015462	ehd3	70	33.592
ENSACIG00000015799	srl	86	31.795	ENSACIG00000022182	ehd1a	71	31.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000015799	srl	100	81.898	ENSG00000185739	SRL	99	83.256	Homo_sapiens
ENSACIG00000015799	srl	100	97.118	ENSAPOG00000018093	srl	99	97.279	Acanthochromis_polyacanthus
ENSACIG00000015799	srl	98	77.652	ENSAPOG00000012432	SRL	99	77.652	Acanthochromis_polyacanthus
ENSACIG00000015799	srl	100	82.340	ENSAMEG00000010862	SRL	51	82.340	Ailuropoda_melanoleuca
ENSACIG00000015799	srl	98	77.928	ENSAOCG00000017049	SRL	97	78.153	Amphiprion_ocellaris
ENSACIG00000015799	srl	96	97.696	ENSAOCG00000007574	srl	100	97.696	Amphiprion_ocellaris
ENSACIG00000015799	srl	100	97.339	ENSAPEG00000006911	srl	96	97.339	Amphiprion_percula
ENSACIG00000015799	srl	98	74.492	ENSAPEG00000006533	SRL	96	75.000	Amphiprion_percula
ENSACIG00000015799	srl	98	76.535	ENSATEG00000009643	SRL	52	76.754	Anabas_testudineus
ENSACIG00000015799	srl	100	97.561	ENSATEG00000024315	srl	96	97.561	Anabas_testudineus
ENSACIG00000015799	srl	98	81.898	ENSACAG00000016380	SRL	85	80.645	Anolis_carolinensis
ENSACIG00000015799	srl	100	98.670	ENSACLG00000027685	srl	98	98.441	Astatotilapia_calliptera
ENSACIG00000015799	srl	99	74.298	ENSACLG00000024674	SRL	58	74.514	Astatotilapia_calliptera
ENSACIG00000015799	srl	100	92.905	ENSAMXG00000018789	srl	88	92.905	Astyanax_mexicanus
ENSACIG00000015799	srl	93	77.857	ENSAMXG00000038693	SRL	100	73.951	Astyanax_mexicanus
ENSACIG00000015799	srl	99	83.407	ENSBTAG00000001078	SRL	57	83.407	Bos_taurus
ENSACIG00000015799	srl	98	83.032	ENSCJAG00000019750	SRL	96	81.898	Callithrix_jacchus
ENSACIG00000015799	srl	100	82.119	ENSCAFG00000019233	SRL	84	82.119	Canis_familiaris
ENSACIG00000015799	srl	100	82.119	ENSCAFG00020025024	SRL	56	82.119	Canis_lupus_dingo
ENSACIG00000015799	srl	99	83.407	ENSCHIG00000017927	SRL	56	83.407	Capra_hircus
ENSACIG00000015799	srl	100	82.561	ENSTSYG00000007919	SRL	99	83.953	Carlito_syrichta
ENSACIG00000015799	srl	99	82.301	ENSCPOG00000012643	SRL	96	82.301	Cavia_porcellus
ENSACIG00000015799	srl	98	77.602	ENSCCAG00000032646	SRL	100	84.433	Cebus_capucinus
ENSACIG00000015799	srl	100	81.898	ENSCATG00000032227	-	96	81.898	Cercocebus_atys
ENSACIG00000015799	srl	99	82.965	ENSCLAG00000016242	SRL	96	82.965	Chinchilla_lanigera
ENSACIG00000015799	srl	85	85.974	ENSCHOG00000001618	SRL	52	85.974	Choloepus_hoffmanni
ENSACIG00000015799	srl	99	86.010	ENSCPBG00000026371	SRL	96	80.778	Chrysemys_picta_bellii
ENSACIG00000015799	srl	92	61.391	ENSCING00000005231	-	93	61.391	Ciona_intestinalis
ENSACIG00000015799	srl	100	81.898	ENSCANG00000035872	SRL	99	83.256	Colobus_angolensis_palliatus
ENSACIG00000015799	srl	100	83.223	ENSCGRG00001016630	Srl	96	83.186	Cricetulus_griseus_chok1gshd
ENSACIG00000015799	srl	100	83.223	ENSCGRG00000005458	Srl	96	83.186	Cricetulus_griseus_crigri
ENSACIG00000015799	srl	100	96.674	ENSCSEG00000016151	srl	96	96.889	Cynoglossus_semilaevis
ENSACIG00000015799	srl	100	75.221	ENSCSEG00000011866	SRL	91	75.442	Cynoglossus_semilaevis
ENSACIG00000015799	srl	99	76.522	ENSCVAG00000022465	SRL	61	76.522	Cyprinodon_variegatus
ENSACIG00000015799	srl	99	94.866	ENSCVAG00000003513	srl	97	94.866	Cyprinodon_variegatus
ENSACIG00000015799	srl	100	92.683	ENSDARG00000104587	srl	96	92.683	Danio_rerio
ENSACIG00000015799	srl	84	78.906	ENSDARG00000112959	CABZ01072309.1	100	78.906	Danio_rerio
ENSACIG00000015799	srl	99	82.444	ENSDNOG00000011643	SRL	54	82.340	Dasypus_novemcinctus
ENSACIG00000015799	srl	99	82.965	ENSDORG00000014807	Srl	96	82.965	Dipodomys_ordii
ENSACIG00000015799	srl	82	66.043	ENSEBUG00000015937	srl	94	66.043	Eptatretus_burgeri
ENSACIG00000015799	srl	98	83.900	ENSEASG00005000942	SRL	54	82.965	Equus_asinus_asinus
ENSACIG00000015799	srl	99	82.965	ENSECAG00000024219	SRL	96	82.965	Equus_caballus
ENSACIG00000015799	srl	100	86.752	ENSELUG00000015616	srl	96	86.752	Esox_lucius
ENSACIG00000015799	srl	98	83.032	ENSFCAG00000022075	SRL	96	82.119	Felis_catus
ENSACIG00000015799	srl	99	82.483	ENSFALG00000004328	SRL	63	83.636	Ficedula_albicollis
ENSACIG00000015799	srl	99	83.186	ENSFDAG00000006199	SRL	96	83.186	Fukomys_damarensis
ENSACIG00000015799	srl	99	95.312	ENSFHEG00000011239	srl	97	95.312	Fundulus_heteroclitus
ENSACIG00000015799	srl	98	77.252	ENSFHEG00000011854	SRL	99	77.477	Fundulus_heteroclitus
ENSACIG00000015799	srl	98	89.427	ENSGMOG00000014954	srl	100	89.427	Gadus_morhua
ENSACIG00000015799	srl	98	83.864	ENSGALG00000038884	SRL	93	83.864	Gallus_gallus
ENSACIG00000015799	srl	100	94.900	ENSGAFG00000000010	srl	98	94.900	Gambusia_affinis
ENSACIG00000015799	srl	99	77.951	ENSGAFG00000016984	SRL	100	77.951	Gambusia_affinis
ENSACIG00000015799	srl	98	94.505	ENSGACG00000011332	srl	100	94.505	Gasterosteus_aculeatus
ENSACIG00000015799	srl	100	81.898	ENSGGOG00000011312	-	96	81.898	Gorilla_gorilla
ENSACIG00000015799	srl	99	74.730	ENSHBUG00000015710	SRL	58	74.946	Haplochromis_burtoni
ENSACIG00000015799	srl	100	98.670	ENSHBUG00000007581	srl	98	98.441	Haplochromis_burtoni
ENSACIG00000015799	srl	99	82.965	ENSHGLG00000015271	SRL	96	82.965	Heterocephalus_glaber_female
ENSACIG00000015799	srl	99	82.965	ENSHGLG00100019378	SRL	96	82.965	Heterocephalus_glaber_male
ENSACIG00000015799	srl	100	96.674	ENSHCOG00000008687	srl	99	96.652	Hippocampus_comes
ENSACIG00000015799	srl	98	74.945	ENSHCOG00000001012	SRL	50	74.945	Hippocampus_comes
ENSACIG00000015799	srl	97	70.183	ENSIPUG00000011609	SRL	95	70.183	Ictalurus_punctatus
ENSACIG00000015799	srl	100	92.018	ENSIPUG00000012513	srl	96	92.018	Ictalurus_punctatus
ENSACIG00000015799	srl	100	82.781	ENSSTOG00000021151	-	96	82.743	Ictidomys_tridecemlineatus
ENSACIG00000015799	srl	99	83.407	ENSJJAG00000016400	Srl	96	83.407	Jaculus_jaculus
ENSACIG00000015799	srl	98	77.324	ENSKMAG00000019537	SRL	100	77.324	Kryptolebias_marmoratus
ENSACIG00000015799	srl	98	95.909	ENSKMAG00000014115	srl	93	97.150	Kryptolebias_marmoratus
ENSACIG00000015799	srl	98	76.244	ENSLBEG00000013811	SRL	95	76.471	Labrus_bergylta
ENSACIG00000015799	srl	100	96.231	ENSLBEG00000026643	srl	96	96.231	Labrus_bergylta
ENSACIG00000015799	srl	100	84.513	ENSLACG00000002825	SRL	100	84.513	Latimeria_chalumnae
ENSACIG00000015799	srl	100	89.159	ENSLOCG00000002644	srl	96	89.159	Lepisosteus_oculatus
ENSACIG00000015799	srl	100	81.898	ENSLAFG00000006329	SRL	52	81.898	Loxodonta_africana
ENSACIG00000015799	srl	95	83.256	ENSMFAG00000037383	SRL	99	83.256	Macaca_fascicularis
ENSACIG00000015799	srl	98	83.032	ENSMNEG00000019236	-	93	83.032	Macaca_nemestrina
ENSACIG00000015799	srl	100	75.055	ENSMLEG00000032156	SRL	95	75.055	Mandrillus_leucophaeus
ENSACIG00000015799	srl	98	75.991	ENSMAMG00000013756	SRL	53	75.991	Mastacembelus_armatus
ENSACIG00000015799	srl	100	96.674	ENSMAMG00000023322	srl	96	96.674	Mastacembelus_armatus
ENSACIG00000015799	srl	100	98.670	ENSMZEG00005004548	srl	98	98.441	Maylandia_zebra
ENSACIG00000015799	srl	99	74.514	ENSMZEG00005004010	SRL	58	74.730	Maylandia_zebra
ENSACIG00000015799	srl	99	82.705	ENSMGAG00000009342	SRL	92	86.575	Meleagris_gallopavo
ENSACIG00000015799	srl	100	82.340	ENSMICG00000032307	SRL	96	82.340	Microcebus_murinus
ENSACIG00000015799	srl	99	82.522	ENSMOCG00000008208	Srl	96	82.522	Microtus_ochrogaster
ENSACIG00000015799	srl	98	74.945	ENSMMOG00000021572	SRL	99	74.945	Mola_mola
ENSACIG00000015799	srl	99	96.889	ENSMMOG00000013970	srl	100	96.889	Mola_mola
ENSACIG00000015799	srl	99	83.370	ENSMODG00000016380	-	51	83.370	Monodelphis_domestica
ENSACIG00000015799	srl	93	77.804	ENSMALG00000000670	SRL	98	77.804	Monopterus_albus
ENSACIG00000015799	srl	99	96.667	ENSMALG00000005039	srl	99	96.652	Monopterus_albus
ENSACIG00000015799	srl	100	83.664	MGP_CAROLIEiJ_G0020400	Srl	94	84.842	Mus_caroli
ENSACIG00000015799	srl	100	83.664	ENSMUSG00000022519	Srl	94	84.842	Mus_musculus
ENSACIG00000015799	srl	100	83.664	MGP_SPRETEiJ_G0021294	Srl	94	84.842	Mus_spretus
ENSACIG00000015799	srl	100	82.340	ENSMPUG00000015025	SRL	55	82.340	Mustela_putorius_furo
ENSACIG00000015799	srl	100	83.223	ENSMLUG00000030733	SRL	57	83.223	Myotis_lucifugus
ENSACIG00000015799	srl	98	84.615	ENSNGAG00000019741	Srl	94	84.615	Nannospalax_galili
ENSACIG00000015799	srl	100	98.670	ENSNBRG00000023775	srl	96	98.670	Neolamprologus_brichardi
ENSACIG00000015799	srl	99	74.514	ENSNBRG00000002422	SRL	58	74.730	Neolamprologus_brichardi
ENSACIG00000015799	srl	98	77.376	ENSNLEG00000029051	SRL	93	77.376	Nomascus_leucogenys
ENSACIG00000015799	srl	100	76.600	ENSOPRG00000000477	-	53	76.600	Ochotona_princeps
ENSACIG00000015799	srl	98	83.937	ENSODEG00000013256	SRL	94	83.937	Octodon_degus
ENSACIG00000015799	srl	100	98.448	ENSONIG00000005192	srl	96	98.448	Oreochromis_niloticus
ENSACIG00000015799	srl	100	81.898	ENSOCUG00000025140	SRL	50	81.898	Oryctolagus_cuniculus
ENSACIG00000015799	srl	98	75.847	ENSORLG00000015064	SRL	97	75.847	Oryzias_latipes
ENSACIG00000015799	srl	99	97.333	ENSORLG00000008291	srl	92	98.454	Oryzias_latipes
ENSACIG00000015799	srl	99	97.778	ENSORLG00020019784	srl	82	97.778	Oryzias_latipes_hni
ENSACIG00000015799	srl	98	76.072	ENSORLG00020018173	SRL	97	76.072	Oryzias_latipes_hni
ENSACIG00000015799	srl	99	97.333	ENSORLG00015009342	srl	93	97.333	Oryzias_latipes_hsok
ENSACIG00000015799	srl	98	76.072	ENSORLG00015019063	SRL	97	76.072	Oryzias_latipes_hsok
ENSACIG00000015799	srl	99	97.111	ENSOMEG00000010006	srl	98	97.500	Oryzias_melastigma
ENSACIG00000015799	srl	98	74.561	ENSOMEG00000005682	SRL	53	74.836	Oryzias_melastigma
ENSACIG00000015799	srl	100	82.561	ENSOGAG00000029266	SRL	55	82.561	Otolemur_garnettii
ENSACIG00000015799	srl	99	83.407	ENSOARG00000003074	SRL	57	83.407	Ovis_aries
ENSACIG00000015799	srl	100	81.898	ENSPPAG00000024919	-	99	83.256	Pan_paniscus
ENSACIG00000015799	srl	98	83.032	ENSPPRG00000010274	SRL	99	83.488	Panthera_pardus
ENSACIG00000015799	srl	98	83.032	ENSPTIG00000015162	SRL	99	83.488	Panthera_tigris_altaica
ENSACIG00000015799	srl	100	81.898	ENSPTRG00000007712	SRL	99	83.256	Pan_troglodytes
ENSACIG00000015799	srl	100	81.898	ENSPANG00000013804	SRL	97	81.898	Papio_anubis
ENSACIG00000015799	srl	100	79.823	ENSPKIG00000024974	SRL	90	79.823	Paramormyrops_kingsleyae
ENSACIG00000015799	srl	100	91.630	ENSPKIG00000006405	srl	96	91.630	Paramormyrops_kingsleyae
ENSACIG00000015799	srl	98	83.296	ENSPSIG00000008586	SRL	50	83.296	Pelodiscus_sinensis
ENSACIG00000015799	srl	98	75.621	ENSPMGG00000023505	-	100	75.621	Periophthalmus_magnuspinnatus
ENSACIG00000015799	srl	99	94.457	ENSPMGG00000021081	srl	97	94.457	Periophthalmus_magnuspinnatus
ENSACIG00000015799	srl	99	82.743	ENSPEMG00000015842	Srl	96	82.743	Peromyscus_maniculatus_bairdii
ENSACIG00000015799	srl	93	68.349	ENSPMAG00000004786	srl	99	68.349	Petromyzon_marinus
ENSACIG00000015799	srl	99	83.370	ENSPCIG00000012128	SRL	99	83.370	Phascolarctos_cinereus
ENSACIG00000015799	srl	99	92.857	ENSPFOG00000011408	srl	95	92.842	Poecilia_formosa
ENSACIG00000015799	srl	100	95.122	ENSPLAG00000008017	srl	98	95.122	Poecilia_latipinna
ENSACIG00000015799	srl	99	76.615	ENSPLAG00000002932	SRL	100	76.615	Poecilia_latipinna
ENSACIG00000015799	srl	99	75.162	ENSPMEG00000005890	SRL	61	74.730	Poecilia_mexicana
ENSACIG00000015799	srl	100	95.122	ENSPMEG00000006745	srl	98	95.122	Poecilia_mexicana
ENSACIG00000015799	srl	99	95.556	ENSPREG00000007751	srl	99	95.556	Poecilia_reticulata
ENSACIG00000015799	srl	99	77.728	ENSPREG00000000315	SRL	100	77.728	Poecilia_reticulata
ENSACIG00000015799	srl	93	84.726	ENSPPYG00000007053	SRL	98	84.726	Pongo_abelii
ENSACIG00000015799	srl	99	82.522	ENSPCAG00000003378	-	51	82.522	Procavia_capensis
ENSACIG00000015799	srl	100	82.340	ENSPCOG00000023135	SRL	99	83.721	Propithecus_coquereli
ENSACIG00000015799	srl	100	82.561	ENSPVAG00000006586	SRL	56	82.561	Pteropus_vampyrus
ENSACIG00000015799	srl	100	98.448	ENSPNYG00000001200	srl	98	98.218	Pundamilia_nyererei
ENSACIG00000015799	srl	99	74.514	ENSPNYG00000003423	SRL	58	74.730	Pundamilia_nyererei
ENSACIG00000015799	srl	98	76.417	ENSPNAG00000007361	-	91	76.417	Pygocentrus_nattereri
ENSACIG00000015799	srl	100	92.461	ENSPNAG00000023106	srl	96	92.461	Pygocentrus_nattereri
ENSACIG00000015799	srl	100	83.664	ENSRNOG00000005269	Srl	50	83.664	Rattus_norvegicus
ENSACIG00000015799	srl	100	81.898	ENSRBIG00000042358	SRL	50	81.898	Rhinopithecus_bieti
ENSACIG00000015799	srl	98	83.032	ENSSBOG00000029273	SRL	96	81.898	Saimiri_boliviensis_boliviensis
ENSACIG00000015799	srl	99	83.149	ENSSHAG00000011715	-	51	83.111	Sarcophilus_harrisii
ENSACIG00000015799	srl	98	93.919	ENSSFOG00015009773	srl	96	93.348	Scleropages_formosus
ENSACIG00000015799	srl	99	77.578	ENSSFOG00015021327	SRL	50	77.455	Scleropages_formosus
ENSACIG00000015799	srl	98	75.385	ENSSMAG00000002232	SRL	50	75.385	Scophthalmus_maximus
ENSACIG00000015799	srl	100	97.118	ENSSMAG00000016274	srl	98	96.882	Scophthalmus_maximus
ENSACIG00000015799	srl	99	96.861	ENSSDUG00000010808	srl	98	96.861	Seriola_dumerili
ENSACIG00000015799	srl	98	77.333	ENSSDUG00000009161	SRL	99	77.333	Seriola_dumerili
ENSACIG00000015799	srl	99	96.889	ENSSLDG00000022024	srl	97	96.659	Seriola_lalandi_dorsalis
ENSACIG00000015799	srl	98	77.074	ENSSLDG00000014601	SRL	100	77.632	Seriola_lalandi_dorsalis
ENSACIG00000015799	srl	100	82.301	ENSSPUG00000016859	SRL	99	82.301	Sphenodon_punctatus
ENSACIG00000015799	srl	98	78.912	ENSSPAG00000014254	SRL	98	78.912	Stegastes_partitus
ENSACIG00000015799	srl	100	97.561	ENSSPAG00000019105	srl	96	97.561	Stegastes_partitus
ENSACIG00000015799	srl	99	82.743	ENSSSCG00000007949	SRL	98	83.673	Sus_scrofa
ENSACIG00000015799	srl	98	83.864	ENSTGUG00000003951	-	97	83.864	Taeniopygia_guttata
ENSACIG00000015799	srl	80	86.464	ENSTGUG00000016121	-	100	86.464	Taeniopygia_guttata
ENSACIG00000015799	srl	93	78.282	ENSTRUG00000013310	SRL	55	78.282	Takifugu_rubripes
ENSACIG00000015799	srl	99	97.333	ENSTRUG00000006005	srl	96	97.333	Takifugu_rubripes
ENSACIG00000015799	srl	99	97.333	ENSTNIG00000009739	srl	96	97.333	Tetraodon_nigroviridis
ENSACIG00000015799	srl	100	82.119	ENSUAMG00000005701	SRL	56	82.119	Ursus_americanus
ENSACIG00000015799	srl	100	82.119	ENSUMAG00000002574	SRL	56	82.119	Ursus_maritimus
ENSACIG00000015799	srl	100	82.119	ENSVVUG00000016331	-	50	82.119	Vulpes_vulpes
ENSACIG00000015799	srl	100	81.153	ENSXETG00000017313	srl	99	81.153	Xenopus_tropicalis
ENSACIG00000015799	srl	99	77.778	ENSXCOG00000014584	SRL	99	77.778	Xiphophorus_couchianus
ENSACIG00000015799	srl	93	95.724	ENSXCOG00000010424	srl	97	95.724	Xiphophorus_couchianus
ENSACIG00000015799	srl	99	95.111	ENSXMAG00000004625	srl	91	95.111	Xiphophorus_maculatus
ENSACIG00000015799	srl	99	75.378	ENSXMAG00000027598	SRL	63	75.378	Xiphophorus_maculatus