EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000015863 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 2877 bases
Position: chrCCOE01001156.1:79731-82607
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000020449	PseudoU_synth_2	PF00849.22	4.9e-26	1	1
ENSACIP00000020445	PseudoU_synth_2	PF00849.22	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000020985	-	933	-	ENSACIP00000020449	310 (aa)	-	-
ENSACIT00000020981	-	918	-	ENSACIP00000020445	305 (aa)	-	-

Gene Model

Click here to download ENSACIG00000015863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000015863's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000015863	rpusd1	98	57.143	ENSG00000007376	RPUSD1	99	67.665	Homo_sapiens
ENSACIG00000015863	rpusd1	100	83.548	ENSAPOG00000022221	rpusd1	99	83.548	Acanthochromis_polyacanthus
ENSACIG00000015863	rpusd1	98	57.843	ENSAMEG00000007461	RPUSD1	98	57.190	Ailuropoda_melanoleuca
ENSACIG00000015863	rpusd1	100	83.871	ENSAOCG00000021975	rpusd1	97	83.871	Amphiprion_ocellaris
ENSACIG00000015863	rpusd1	100	84.194	ENSAPEG00000001316	rpusd1	97	84.194	Amphiprion_percula
ENSACIG00000015863	rpusd1	100	84.194	ENSATEG00000002984	rpusd1	99	84.194	Anabas_testudineus
ENSACIG00000015863	rpusd1	77	58.848	ENSAPLG00000012316	RPUSD1	98	57.438	Anas_platyrhynchos
ENSACIG00000015863	rpusd1	98	63.072	ENSACAG00000008953	RPUSD1	99	61.967	Anolis_carolinensis
ENSACIG00000015863	rpusd1	98	57.516	ENSANAG00000024709	RPUSD1	98	57.516	Aotus_nancymaae
ENSACIG00000015863	rpusd1	100	90.354	ENSACLG00000013692	rpusd1	100	90.354	Astatotilapia_calliptera
ENSACIG00000015863	rpusd1	99	67.101	ENSAMXG00000019802	rpusd1	99	66.990	Astyanax_mexicanus
ENSACIG00000015863	rpusd1	98	60.458	ENSBTAG00000000179	RPUSD1	98	60.131	Bos_taurus
ENSACIG00000015863	rpusd1	98	57.516	ENSCJAG00000012253	RPUSD1	98	57.516	Callithrix_jacchus
ENSACIG00000015863	rpusd1	98	57.516	ENSCAFG00000019614	RPUSD1	98	57.190	Canis_familiaris
ENSACIG00000015863	rpusd1	98	57.516	ENSCAFG00020008891	RPUSD1	98	57.190	Canis_lupus_dingo
ENSACIG00000015863	rpusd1	98	60.784	ENSCHIG00000012872	RPUSD1	98	60.458	Capra_hircus
ENSACIG00000015863	rpusd1	98	57.003	ENSTSYG00000036934	RPUSD1	98	56.209	Carlito_syrichta
ENSACIG00000015863	rpusd1	98	57.843	ENSCAPG00000014219	RPUSD1	83	65.217	Cavia_aperea
ENSACIG00000015863	rpusd1	98	57.843	ENSCPOG00000034604	RPUSD1	83	65.217	Cavia_porcellus
ENSACIG00000015863	rpusd1	98	57.190	ENSCCAG00000034385	RPUSD1	98	57.190	Cebus_capucinus
ENSACIG00000015863	rpusd1	98	57.792	ENSCATG00000042983	RPUSD1	98	57.516	Cercocebus_atys
ENSACIG00000015863	rpusd1	98	57.516	ENSCLAG00000013966	RPUSD1	93	61.246	Chinchilla_lanigera
ENSACIG00000015863	rpusd1	98	57.468	ENSCSAG00000012121	RPUSD1	98	57.190	Chlorocebus_sabaeus
ENSACIG00000015863	rpusd1	98	61.438	ENSCPBG00000021101	RPUSD1	99	60.784	Chrysemys_picta_bellii
ENSACIG00000015863	rpusd1	92	61.972	ENSCANG00000028576	RPUSD1	99	61.972	Colobus_angolensis_palliatus
ENSACIG00000015863	rpusd1	98	57.003	ENSCGRG00001014253	Rpusd1	98	57.329	Cricetulus_griseus_chok1gshd
ENSACIG00000015863	rpusd1	98	57.003	ENSCGRG00000017995	Rpusd1	98	57.329	Cricetulus_griseus_crigri
ENSACIG00000015863	rpusd1	98	80.592	ENSCSEG00000018512	rpusd1	98	80.592	Cynoglossus_semilaevis
ENSACIG00000015863	rpusd1	100	80.000	ENSCVAG00000022746	rpusd1	100	79.677	Cyprinodon_variegatus
ENSACIG00000015863	rpusd1	98	69.836	ENSDARG00000060192	rpusd1	99	68.404	Danio_rerio
ENSACIG00000015863	rpusd1	98	56.536	ENSDNOG00000003721	RPUSD1	98	57.190	Dasypus_novemcinctus
ENSACIG00000015863	rpusd1	98	58.170	ENSDORG00000026656	Rpusd1	98	58.170	Dipodomys_ordii
ENSACIG00000015863	rpusd1	96	45.541	ENSEBUG00000008767	rpusd1	85	48.582	Eptatretus_burgeri
ENSACIG00000015863	rpusd1	99	57.643	ENSEASG00005018421	RPUSD1	74	57.643	Equus_asinus_asinus
ENSACIG00000015863	rpusd1	100	69.032	ENSELUG00000014307	rpusd1	90	69.677	Esox_lucius
ENSACIG00000015863	rpusd1	98	58.170	ENSFCAG00000010359	RPUSD1	98	57.843	Felis_catus
ENSACIG00000015863	rpusd1	98	64.590	ENSFALG00000003211	RPUSD1	99	64.590	Ficedula_albicollis
ENSACIG00000015863	rpusd1	98	57.516	ENSFDAG00000013398	RPUSD1	98	57.516	Fukomys_damarensis
ENSACIG00000015863	rpusd1	100	79.677	ENSFHEG00000004736	rpusd1	100	80.323	Fundulus_heteroclitus
ENSACIG00000015863	rpusd1	99	71.565	ENSGMOG00000010756	rpusd1	99	70.227	Gadus_morhua
ENSACIG00000015863	rpusd1	98	63.279	ENSGALG00000005315	RPUSD1	99	62.092	Gallus_gallus
ENSACIG00000015863	rpusd1	100	78.387	ENSGAFG00000009886	rpusd1	100	78.135	Gambusia_affinis
ENSACIG00000015863	rpusd1	100	81.935	ENSGACG00000014276	rpusd1	100	81.613	Gasterosteus_aculeatus
ENSACIG00000015863	rpusd1	98	60.784	ENSGAGG00000004181	RPUSD1	99	58.442	Gopherus_agassizii
ENSACIG00000015863	rpusd1	98	57.929	ENSGGOG00000013997	RPUSD1	98	57.655	Gorilla_gorilla
ENSACIG00000015863	rpusd1	100	90.675	ENSHBUG00000023728	rpusd1	100	90.675	Haplochromis_burtoni
ENSACIG00000015863	rpusd1	98	56.863	ENSHGLG00000002595	RPUSD1	98	56.863	Heterocephalus_glaber_female
ENSACIG00000015863	rpusd1	98	56.863	ENSHGLG00100014303	RPUSD1	98	56.863	Heterocephalus_glaber_male
ENSACIG00000015863	rpusd1	99	75.896	ENSHCOG00000002390	rpusd1	99	74.919	Hippocampus_comes
ENSACIG00000015863	rpusd1	98	66.775	ENSIPUG00000001570	rpusd1	98	66.557	Ictalurus_punctatus
ENSACIG00000015863	rpusd1	98	58.170	ENSSTOG00000004276	RPUSD1	98	58.170	Ictidomys_tridecemlineatus
ENSACIG00000015863	rpusd1	98	56.863	ENSJJAG00000015696	Rpusd1	98	57.516	Jaculus_jaculus
ENSACIG00000015863	rpusd1	100	77.492	ENSKMAG00000017287	rpusd1	100	77.492	Kryptolebias_marmoratus
ENSACIG00000015863	rpusd1	100	79.677	ENSLBEG00000013354	RPUSD1	99	80.323	Labrus_bergylta
ENSACIG00000015863	rpusd1	100	79.677	ENSLBEG00000022502	rpusd1	99	80.323	Labrus_bergylta
ENSACIG00000015863	rpusd1	98	62.623	ENSLACG00000008869	RPUSD1	99	61.311	Latimeria_chalumnae
ENSACIG00000015863	rpusd1	71	79.167	ENSLOCG00000005682	rpusd1	99	79.167	Lepisosteus_oculatus
ENSACIG00000015863	rpusd1	98	56.209	ENSLAFG00000002115	RPUSD1	98	56.209	Loxodonta_africana
ENSACIG00000015863	rpusd1	98	57.792	ENSMFAG00000003961	RPUSD1	98	57.516	Macaca_fascicularis
ENSACIG00000015863	rpusd1	98	57.792	ENSMMUG00000000842	RPUSD1	98	57.516	Macaca_mulatta
ENSACIG00000015863	rpusd1	98	57.792	ENSMNEG00000042712	RPUSD1	98	57.516	Macaca_nemestrina
ENSACIG00000015863	rpusd1	98	57.792	ENSMLEG00000030591	RPUSD1	98	57.516	Mandrillus_leucophaeus
ENSACIG00000015863	rpusd1	100	84.839	ENSMAMG00000004735	rpusd1	99	84.839	Mastacembelus_armatus
ENSACIG00000015863	rpusd1	100	90.354	ENSMZEG00005003214	rpusd1	100	90.354	Maylandia_zebra
ENSACIG00000015863	rpusd1	97	63.245	ENSMGAG00000005447	RPUSD1	99	61.921	Meleagris_gallopavo
ENSACIG00000015863	rpusd1	82	56.420	ENSMAUG00000019998	Rpusd1	96	56.420	Mesocricetus_auratus
ENSACIG00000015863	rpusd1	98	57.190	ENSMICG00000017561	RPUSD1	98	56.863	Microcebus_murinus
ENSACIG00000015863	rpusd1	98	57.190	ENSMOCG00000014082	Rpusd1	98	57.190	Microtus_ochrogaster
ENSACIG00000015863	rpusd1	99	76.873	ENSMMOG00000012569	rpusd1	99	76.873	Mola_mola
ENSACIG00000015863	rpusd1	99	60.912	ENSMODG00000016882	RPUSD1	99	60.261	Monodelphis_domestica
ENSACIG00000015863	rpusd1	100	84.516	ENSMALG00000017818	rpusd1	99	84.516	Monopterus_albus
ENSACIG00000015863	rpusd1	98	57.843	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.843	Mus_caroli
ENSACIG00000015863	rpusd1	98	58.170	ENSMUSG00000041199	Rpusd1	98	58.170	Mus_musculus
ENSACIG00000015863	rpusd1	98	57.516	MGP_PahariEiJ_G0023562	Rpusd1	98	57.516	Mus_pahari
ENSACIG00000015863	rpusd1	98	58.170	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.170	Mus_spretus
ENSACIG00000015863	rpusd1	96	57.475	ENSMPUG00000015897	RPUSD1	96	57.143	Mustela_putorius_furo
ENSACIG00000015863	rpusd1	98	56.869	ENSMLUG00000001089	RPUSD1	91	61.512	Myotis_lucifugus
ENSACIG00000015863	rpusd1	98	56.863	ENSNGAG00000003595	Rpusd1	93	60.900	Nannospalax_galili
ENSACIG00000015863	rpusd1	100	88.746	ENSNBRG00000006457	rpusd1	100	88.746	Neolamprologus_brichardi
ENSACIG00000015863	rpusd1	54	50.000	ENSNLEG00000008424	-	97	50.000	Nomascus_leucogenys
ENSACIG00000015863	rpusd1	98	61.238	ENSMEUG00000016049	RPUSD1	98	60.129	Notamacropus_eugenii
ENSACIG00000015863	rpusd1	98	52.614	ENSOPRG00000008340	RPUSD1	98	52.443	Ochotona_princeps
ENSACIG00000015863	rpusd1	98	57.516	ENSODEG00000016945	RPUSD1	90	62.230	Octodon_degus
ENSACIG00000015863	rpusd1	99	90.584	ENSONIG00000015672	rpusd1	100	90.584	Oreochromis_niloticus
ENSACIG00000015863	rpusd1	100	79.355	ENSORLG00000013009	rpusd1	99	76.923	Oryzias_latipes
ENSACIG00000015863	rpusd1	100	79.032	ENSORLG00020010382	rpusd1	99	76.603	Oryzias_latipes_hni
ENSACIG00000015863	rpusd1	100	78.387	ENSORLG00015021354	rpusd1	99	75.962	Oryzias_latipes_hsok
ENSACIG00000015863	rpusd1	100	78.065	ENSOMEG00000021426	rpusd1	99	76.452	Oryzias_melastigma
ENSACIG00000015863	rpusd1	98	57.190	ENSOGAG00000003795	RPUSD1	98	57.190	Otolemur_garnettii
ENSACIG00000015863	rpusd1	98	60.784	ENSOARG00000014254	RPUSD1	98	60.458	Ovis_aries
ENSACIG00000015863	rpusd1	98	57.468	ENSPPAG00000034797	RPUSD1	98	57.190	Pan_paniscus
ENSACIG00000015863	rpusd1	98	58.497	ENSPPRG00000012389	RPUSD1	98	58.170	Panthera_pardus
ENSACIG00000015863	rpusd1	99	58.442	ENSPTIG00000008545	RPUSD1	77	73.267	Panthera_tigris_altaica
ENSACIG00000015863	rpusd1	98	57.468	ENSPTRG00000007565	RPUSD1	98	57.190	Pan_troglodytes
ENSACIG00000015863	rpusd1	98	57.792	ENSPANG00000024401	RPUSD1	98	57.516	Papio_anubis
ENSACIG00000015863	rpusd1	100	68.065	ENSPKIG00000018890	rpusd1	91	66.773	Paramormyrops_kingsleyae
ENSACIG00000015863	rpusd1	98	62.903	ENSPSIG00000013945	RPUSD1	99	61.889	Pelodiscus_sinensis
ENSACIG00000015863	rpusd1	100	72.903	ENSPMGG00000014950	rpusd1	99	71.935	Periophthalmus_magnuspinnatus
ENSACIG00000015863	rpusd1	98	57.516	ENSPEMG00000000497	Rpusd1	98	56.863	Peromyscus_maniculatus_bairdii
ENSACIG00000015863	rpusd1	99	54.221	ENSPMAG00000001563	rpusd1	99	53.247	Petromyzon_marinus
ENSACIG00000015863	rpusd1	99	61.935	ENSPCIG00000021216	-	93	61.564	Phascolarctos_cinereus
ENSACIG00000015863	rpusd1	100	80.000	ENSPFOG00000007946	rpusd1	100	78.846	Poecilia_formosa
ENSACIG00000015863	rpusd1	100	79.677	ENSPLAG00000011925	rpusd1	100	78.526	Poecilia_latipinna
ENSACIG00000015863	rpusd1	100	80.000	ENSPMEG00000002910	rpusd1	100	78.846	Poecilia_mexicana
ENSACIG00000015863	rpusd1	100	80.323	ENSPREG00000019851	rpusd1	100	79.167	Poecilia_reticulata
ENSACIG00000015863	rpusd1	98	45.098	ENSPCAG00000002258	RPUSD1	98	44.444	Procavia_capensis
ENSACIG00000015863	rpusd1	98	56.494	ENSPCOG00000022582	RPUSD1	98	56.536	Propithecus_coquereli
ENSACIG00000015863	rpusd1	98	53.896	ENSPVAG00000013104	RPUSD1	98	54.248	Pteropus_vampyrus
ENSACIG00000015863	rpusd1	100	90.675	ENSPNYG00000024076	rpusd1	100	90.675	Pundamilia_nyererei
ENSACIG00000015863	rpusd1	99	66.124	ENSPNAG00000013806	rpusd1	99	65.584	Pygocentrus_nattereri
ENSACIG00000015863	rpusd1	98	58.497	ENSRNOG00000023639	Rpusd1	98	58.497	Rattus_norvegicus
ENSACIG00000015863	rpusd1	98	58.117	ENSRBIG00000030238	RPUSD1	98	57.843	Rhinopithecus_bieti
ENSACIG00000015863	rpusd1	98	58.117	ENSRROG00000036663	RPUSD1	98	57.843	Rhinopithecus_roxellana
ENSACIG00000015863	rpusd1	98	58.170	ENSSBOG00000033063	RPUSD1	98	58.170	Saimiri_boliviensis_boliviensis
ENSACIG00000015863	rpusd1	98	61.688	ENSSHAG00000013500	RPUSD1	98	61.364	Sarcophilus_harrisii
ENSACIG00000015863	rpusd1	98	71.148	ENSSFOG00015014394	rpusd1	99	68.852	Scleropages_formosus
ENSACIG00000015863	rpusd1	100	83.871	ENSSMAG00000008045	rpusd1	93	84.516	Scophthalmus_maximus
ENSACIG00000015863	rpusd1	100	83.226	ENSSDUG00000001829	rpusd1	97	86.774	Seriola_dumerili
ENSACIG00000015863	rpusd1	100	83.226	ENSSLDG00000020853	rpusd1	97	86.774	Seriola_lalandi_dorsalis
ENSACIG00000015863	rpusd1	54	73.054	ENSSARG00000011187	-	100	73.054	Sorex_araneus
ENSACIG00000015863	rpusd1	63	56.186	ENSSPUG00000005119	-	98	56.186	Sphenodon_punctatus
ENSACIG00000015863	rpusd1	100	86.129	ENSSPAG00000012708	rpusd1	99	86.129	Stegastes_partitus
ENSACIG00000015863	rpusd1	98	58.766	ENSSSCG00000008000	RPUSD1	98	66.929	Sus_scrofa
ENSACIG00000015863	rpusd1	82	68.526	ENSTGUG00000015375	RPUSD1	99	68.526	Taeniopygia_guttata
ENSACIG00000015863	rpusd1	100	80.645	ENSTRUG00000003041	rpusd1	99	80.645	Takifugu_rubripes
ENSACIG00000015863	rpusd1	99	71.010	ENSTNIG00000002660	rpusd1	96	80.077	Tetraodon_nigroviridis
ENSACIG00000015863	rpusd1	98	59.416	ENSTTRG00000010167	RPUSD1	98	59.477	Tursiops_truncatus
ENSACIG00000015863	rpusd1	98	57.190	ENSUAMG00000012736	RPUSD1	98	56.863	Ursus_americanus
ENSACIG00000015863	rpusd1	98	57.190	ENSUMAG00000021174	RPUSD1	91	64.822	Ursus_maritimus
ENSACIG00000015863	rpusd1	98	58.824	ENSVVUG00000012357	RPUSD1	98	57.516	Vulpes_vulpes
ENSACIG00000015863	rpusd1	98	62.623	ENSXETG00000007184	rpusd1	98	60.984	Xenopus_tropicalis
ENSACIG00000015863	rpusd1	100	78.387	ENSXCOG00000017930	rpusd1	100	78.135	Xiphophorus_couchianus
ENSACIG00000015863	rpusd1	100	79.032	ENSXMAG00000024084	rpusd1	100	78.778	Xiphophorus_maculatus