EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000016026 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 942 bases
Position: chrCCOE01000563.1:208003-208944
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000020629	zf-CCCH	PF00642.24	1.6e-31	1	4
ENSACIP00000020629	zf-CCCH	PF00642.24	1.6e-31	2	4
ENSACIP00000020629	zf-CCCH	PF00642.24	1.6e-31	3	4
ENSACIP00000020629	zf-CCCH	PF00642.24	1.6e-31	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000021167	-	942	-	ENSACIP00000020629	313 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016026	cth1	89	64.311	ENSAPOG00000012552	cth1	83	64.754	Acanthochromis_polyacanthus
ENSACIG00000016026	cth1	99	65.605	ENSAOCG00000001644	cth1	88	68.132	Amphiprion_ocellaris
ENSACIG00000016026	cth1	99	65.605	ENSAPEG00000008930	cth1	88	68.132	Amphiprion_percula
ENSACIG00000016026	cth1	99	62.985	ENSATEG00000002281	cth1	86	66.434	Anabas_testudineus
ENSACIG00000016026	cth1	90	72.792	ENSACLG00000015353	cth1	84	73.577	Astatotilapia_calliptera
ENSACIG00000016026	cth1	96	54.601	ENSAMXG00000025717	cth1	58	70.312	Astyanax_mexicanus
ENSACIG00000016026	cth1	99	61.420	ENSCSEG00000014617	cth1	88	63.604	Cynoglossus_semilaevis
ENSACIG00000016026	cth1	99	57.143	ENSCVAG00000001680	cth1	57	60.949	Cyprinodon_variegatus
ENSACIG00000016026	cth1	90	54.967	ENSDARG00000057328	cth1	57	68.229	Danio_rerio
ENSACIG00000016026	cth1	99	53.448	ENSELUG00000012738	cth1	57	67.677	Esox_lucius
ENSACIG00000016026	cth1	99	57.098	ENSFHEG00000022665	cth1	88	58.123	Fundulus_heteroclitus
ENSACIG00000016026	cth1	99	59.248	ENSGMOG00000007360	cth1	90	60.854	Gadus_morhua
ENSACIG00000016026	cth1	99	57.276	ENSGAFG00000019288	cth1	88	58.156	Gambusia_affinis
ENSACIG00000016026	cth1	99	64.444	ENSGACG00000000802	cth1	87	65.328	Gasterosteus_aculeatus
ENSACIG00000016026	cth1	99	73.885	ENSHBUG00000014400	cth1	88	74.909	Haplochromis_burtoni
ENSACIG00000016026	cth1	98	49.351	ENSHCOG00000010276	cth1	85	51.866	Hippocampus_comes
ENSACIG00000016026	cth1	96	55.692	ENSIPUG00000018040	cth1	85	60.573	Ictalurus_punctatus
ENSACIG00000016026	cth1	99	55.836	ENSKMAG00000005944	cth1	87	60.507	Kryptolebias_marmoratus
ENSACIG00000016026	cth1	99	65.528	ENSLBEG00000019253	cth1	88	68.571	Labrus_bergylta
ENSACIG00000016026	cth1	78	49.545	ENSLOCG00000002047	cth1	82	54.696	Lepisosteus_oculatus
ENSACIG00000016026	cth1	77	59.524	ENSMAMG00000001525	cth1	53	66.667	Mastacembelus_armatus
ENSACIG00000016026	cth1	99	74.204	ENSMZEG00005022335	cth1	88	75.273	Maylandia_zebra
ENSACIG00000016026	cth1	95	65.147	ENSMMOG00000020518	cth1	95	67.606	Mola_mola
ENSACIG00000016026	cth1	88	73.188	ENSNBRG00000022789	cth1	88	71.014	Neolamprologus_brichardi
ENSACIG00000016026	cth1	100	75.873	ENSONIG00000021318	cth1	89	76.449	Oreochromis_niloticus
ENSACIG00000016026	cth1	99	57.778	ENSORLG00000022847	cth1	88	60.949	Oryzias_latipes
ENSACIG00000016026	cth1	99	58.491	ENSORLG00020011979	cth1	88	61.372	Oryzias_latipes_hni
ENSACIG00000016026	cth1	99	56.230	ENSORLG00015013084	cth1	88	60.949	Oryzias_latipes_hsok
ENSACIG00000016026	cth1	89	59.431	ENSOMEG00000005809	cth1	77	58.974	Oryzias_melastigma
ENSACIG00000016026	cth1	84	53.559	ENSPKIG00000015883	cth1	85	54.296	Paramormyrops_kingsleyae
ENSACIG00000016026	cth1	99	62.270	ENSPMGG00000004275	cth1	89	62.847	Periophthalmus_magnuspinnatus
ENSACIG00000016026	cth1	99	56.075	ENSPFOG00000013583	cth1	82	58.929	Poecilia_formosa
ENSACIG00000016026	cth1	99	56.075	ENSPLAG00000018158	cth1	82	58.511	Poecilia_latipinna
ENSACIG00000016026	cth1	99	56.740	ENSPMEG00000005744	cth1	88	58.929	Poecilia_mexicana
ENSACIG00000016026	cth1	99	56.426	ENSPREG00000004099	cth1	88	57.194	Poecilia_reticulata
ENSACIG00000016026	cth1	91	69.580	ENSPNYG00000016705	cth1	88	68.914	Pundamilia_nyererei
ENSACIG00000016026	cth1	96	55.215	ENSPNAG00000013147	cth1	85	57.746	Pygocentrus_nattereri
ENSACIG00000016026	cth1	87	52.901	ENSSFOG00015017190	cth1	60	61.111	Scleropages_formosus
ENSACIG00000016026	cth1	99	63.467	ENSSMAG00000007977	cth1	88	67.138	Scophthalmus_maximus
ENSACIG00000016026	cth1	99	64.776	ENSSDUG00000004321	cth1	88	63.763	Seriola_dumerili
ENSACIG00000016026	cth1	99	66.269	ENSSLDG00000012760	cth1	87	64.808	Seriola_lalandi_dorsalis
ENSACIG00000016026	cth1	99	66.567	ENSSLDG00000010023	-	87	65.035	Seriola_lalandi_dorsalis
ENSACIG00000016026	cth1	100	66.369	ENSSLDG00000004516	-	87	64.808	Seriola_lalandi_dorsalis
ENSACIG00000016026	cth1	100	59.091	ENSSPAG00000018659	cth1	89	64.894	Stegastes_partitus
ENSACIG00000016026	cth1	99	60.123	ENSTRUG00000012770	cth1	89	60.140	Takifugu_rubripes
ENSACIG00000016026	cth1	99	60.494	ENSTNIG00000000740	cth1	89	61.189	Tetraodon_nigroviridis
ENSACIG00000016026	cth1	81	55.426	ENSXCOG00000003710	cth1	82	51.852	Xiphophorus_couchianus
ENSACIG00000016026	cth1	99	58.307	ENSXMAG00000023885	cth1	88	57.554	Xiphophorus_maculatus