EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000016154 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 17038 bases
Position: chrCCOE01001432.1:1080655-1097692
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	1	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	2	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	3	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	4	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	5	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	6	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	7	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	8	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	9	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	10	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	11	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	12	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	13	14
ENSACIP00000020847	KH_1	PF00013.29	2.6e-182	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000021390	-	3663	-	ENSACIP00000020847	1220 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000016154	hdlbpb	87	68.661	ENSACIG00000006015	hdlbpa	93	68.661

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016154	hdlbpb	100	91.680	ENSAPOG00000006904	hdlbpb	100	91.680	Acanthochromis_polyacanthus
ENSACIG00000016154	hdlbpb	100	92.637	ENSAOCG00000004083	hdlbpb	100	92.637	Amphiprion_ocellaris
ENSACIG00000016154	hdlbpb	100	92.229	ENSAPEG00000012270	hdlbpb	100	92.229	Amphiprion_percula
ENSACIG00000016154	hdlbpb	100	91.825	ENSATEG00000019877	hdlbpb	100	91.825	Anabas_testudineus
ENSACIG00000016154	hdlbpb	100	79.430	ENSACAG00000003606	-	100	79.430	Anolis_carolinensis
ENSACIG00000016154	hdlbpb	100	93.328	ENSACLG00000006618	hdlbpb	100	92.386	Astatotilapia_calliptera
ENSACIG00000016154	hdlbpb	100	74.941	ENSAMXG00000019946	hdlbpb	100	74.784	Astyanax_mexicanus
ENSACIG00000016154	hdlbpb	100	90.416	ENSCSEG00000000955	hdlbpb	100	90.964	Cynoglossus_semilaevis
ENSACIG00000016154	hdlbpb	100	90.816	ENSCVAG00000005345	hdlbpb	100	90.581	Cyprinodon_variegatus
ENSACIG00000016154	hdlbpb	99	82.372	ENSDARG00000061864	hdlbpb	99	82.134	Danio_rerio
ENSACIG00000016154	hdlbpb	93	69.204	ENSEBUG00000005304	hdlbpb	94	70.168	Eptatretus_burgeri
ENSACIG00000016154	hdlbpb	87	38.309	ENSELUG00000019925	hdlbpb	100	75.000	Esox_lucius
ENSACIG00000016154	hdlbpb	100	85.535	ENSFHEG00000001701	hdlbpb	100	84.906	Fundulus_heteroclitus
ENSACIG00000016154	hdlbpb	96	84.977	ENSGMOG00000004522	hdlbpb	77	84.977	Gadus_morhua
ENSACIG00000016154	hdlbpb	100	90.188	ENSGAFG00000005278	hdlbpb	100	90.188	Gambusia_affinis
ENSACIG00000016154	hdlbpb	99	87.814	ENSGACG00000019361	hdlbpb	100	87.814	Gasterosteus_aculeatus
ENSACIG00000016154	hdlbpb	100	93.250	ENSHBUG00000018434	hdlbpb	100	92.936	Haplochromis_burtoni
ENSACIG00000016154	hdlbpb	100	81.697	ENSIPUG00000003291	HDLBP	100	82.031	Ictalurus_punctatus
ENSACIG00000016154	hdlbpb	100	90.895	ENSKMAG00000016562	hdlbpb	100	90.895	Kryptolebias_marmoratus
ENSACIG00000016154	hdlbpb	100	91.523	ENSLBEG00000027855	hdlbpb	100	91.451	Labrus_bergylta
ENSACIG00000016154	hdlbpb	100	68.978	ENSLACG00000007661	hdlbpb	100	68.978	Latimeria_chalumnae
ENSACIG00000016154	hdlbpb	100	80.474	ENSLOCG00000013909	hdlbpb	100	80.395	Lepisosteus_oculatus
ENSACIG00000016154	hdlbpb	100	91.706	ENSMAMG00000003035	hdlbpb	100	91.153	Mastacembelus_armatus
ENSACIG00000016154	hdlbpb	100	93.328	ENSMZEG00005021465	hdlbpb	100	92.386	Maylandia_zebra
ENSACIG00000016154	hdlbpb	100	90.945	ENSMMOG00000012525	hdlbpb	100	89.929	Mola_mola
ENSACIG00000016154	hdlbpb	100	89.560	ENSMALG00000008938	hdlbpb	100	89.560	Monopterus_albus
ENSACIG00000016154	hdlbpb	100	93.328	ENSNBRG00000002236	hdlbpb	100	92.386	Neolamprologus_brichardi
ENSACIG00000016154	hdlbpb	100	93.250	ENSONIG00000009211	hdlbpb	100	92.857	Oreochromis_niloticus
ENSACIG00000016154	hdlbpb	100	90.259	ENSORLG00000006581	hdlbpb	100	90.259	Oryzias_latipes
ENSACIG00000016154	hdlbpb	100	90.259	ENSORLG00020010012	hdlbpb	100	90.259	Oryzias_latipes_hni
ENSACIG00000016154	hdlbpb	100	90.652	ENSORLG00015006863	hdlbpb	100	90.416	Oryzias_latipes_hsok
ENSACIG00000016154	hdlbpb	100	90.573	ENSOMEG00000011131	hdlbpb	100	90.573	Oryzias_melastigma
ENSACIG00000016154	hdlbpb	100	85.241	ENSPKIG00000005966	hdlbpb	100	85.083	Paramormyrops_kingsleyae
ENSACIG00000016154	hdlbpb	93	89.344	ENSPMGG00000019853	hdlbpb	99	89.344	Periophthalmus_magnuspinnatus
ENSACIG00000016154	hdlbpb	94	73.747	ENSPMAG00000002131	hdlbpb	100	73.747	Petromyzon_marinus
ENSACIG00000016154	hdlbpb	90	66.438	ENSPMAG00000000249	-	99	66.447	Petromyzon_marinus
ENSACIG00000016154	hdlbpb	100	89.674	ENSPFOG00000008755	hdlbpb	100	89.286	Poecilia_formosa
ENSACIG00000016154	hdlbpb	100	90.659	ENSPLAG00000007055	hdlbpb	100	90.659	Poecilia_latipinna
ENSACIG00000016154	hdlbpb	100	90.581	ENSPMEG00000001952	hdlbpb	100	90.581	Poecilia_mexicana
ENSACIG00000016154	hdlbpb	100	90.659	ENSPREG00000012848	hdlbpb	100	90.738	Poecilia_reticulata
ENSACIG00000016154	hdlbpb	100	93.543	ENSPNYG00000022467	hdlbpb	100	93.307	Pundamilia_nyererei
ENSACIG00000016154	hdlbpb	100	84.094	ENSPNAG00000011104	hdlbpb	100	83.937	Pygocentrus_nattereri
ENSACIG00000016154	hdlbpb	100	84.688	ENSSFOG00015023199	hdlbpb	100	84.609	Scleropages_formosus
ENSACIG00000016154	hdlbpb	100	91.680	ENSSMAG00000008790	hdlbpb	100	90.895	Scophthalmus_maximus
ENSACIG00000016154	hdlbpb	100	92.302	ENSSDUG00000020694	hdlbpb	100	92.302	Seriola_dumerili
ENSACIG00000016154	hdlbpb	100	92.908	ENSSLDG00000020807	hdlbpb	100	92.908	Seriola_lalandi_dorsalis
ENSACIG00000016154	hdlbpb	100	79.272	ENSSPUG00000018688	-	100	79.589	Sphenodon_punctatus
ENSACIG00000016154	hdlbpb	100	92.308	ENSSPAG00000016969	hdlbpb	100	92.386	Stegastes_partitus
ENSACIG00000016154	hdlbpb	98	87.934	ENSTRUG00000012888	hdlbpb	99	88.013	Takifugu_rubripes
ENSACIG00000016154	hdlbpb	99	89.080	ENSTNIG00000002555	hdlbpb	100	89.080	Tetraodon_nigroviridis
ENSACIG00000016154	hdlbpb	100	78.148	ENSXCOG00000001797	hdlbpb	100	78.148	Xiphophorus_couchianus
ENSACIG00000016154	hdlbpb	100	90.031	ENSXMAG00000015633	hdlbpb	100	90.031	Xiphophorus_maculatus