EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000016186 (Gene tree)
Gene ID: -
Gene Symbol: rbms2b
Alias: zgc:100836
Full Name: RNA binding motif%2C single stranded interacting protein 2b
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 7347 bases
Position: chrCCOE01000065.1:34814-42160
Accession: ZDB-GENE-040801-51
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000020835	RRM_1	PF00076.22	1.8e-27	1	2
ENSACIP00000020835	RRM_1	PF00076.22	1.8e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000021376	-	555	-	ENSACIP00000020835	184 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016186's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000016186	rbms2b	78	33.684	ENSACIG00000018366	pabpc1b	60	34.043
ENSACIG00000016186	rbms2b	72	41.429	ENSACIG00000023343	pabpc4	54	41.429
ENSACIG00000016186	rbms2b	91	74.405	ENSACIG00000021113	RBMS3	56	85.106
ENSACIG00000016186	rbms2b	82	35.789	ENSACIG00000021004	-	71	35.789
ENSACIG00000016186	rbms2b	78	33.684	ENSACIG00000004685	pabpc1a	59	34.043
ENSACIG00000016186	rbms2b	79	36.667	ENSACIG00000024190	elavl3	62	35.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016186	rbms2b	79	83.444	ENSACLG00000002393	rbms2a	74	83.444	Astatotilapia_calliptera
ENSACIG00000016186	rbms2b	84	63.694	ENSCSAVG00000004539	-	55	71.429	Ciona_savignyi
ENSACIG00000016186	rbms2b	72	97.727	ENSLBEG00000010843	rbms2b	70	88.742	Labrus_bergylta
ENSACIG00000016186	rbms2b	73	81.343	ENSOMEG00000014637	-	59	74.172	Oryzias_melastigma
ENSACIG00000016186	rbms2b	54	72.115	ENSPMAG00000006727	-	60	88.158	Petromyzon_marinus
ENSACIG00000016186	rbms2b	82	72.258	ENSPREG00000020560	rbms2b	52	69.620	Poecilia_reticulata
ENSACIG00000016186	rbms2b	73	81.343	ENSPNYG00000000648	-	73	74.497	Pundamilia_nyererei
ENSACIG00000016186	rbms2b	72	91.729	ENSSBOG00000028640	RBMS2	51	82.781	Saimiri_boliviensis_boliviensis
ENSACIG00000016186	rbms2b	71	90.840	ENSSHAG00000004939	RBMS2	62	81.457	Sarcophilus_harrisii
ENSACIG00000016186	rbms2b	72	96.212	ENSSFOG00015006642	-	66	96.212	Scleropages_formosus
ENSACIG00000016186	rbms2b	70	80.620	ENSSSCG00000039527	-	79	80.620	Sus_scrofa
ENSACIG00000016186	rbms2b	79	58.553	ENSXCOG00000018635	rbms2a	69	59.211	Xiphophorus_couchianus