EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000016368 (Gene tree)
Gene ID: -
Gene Symbol: RBM20
Alias: -
Full Name: RNA binding motif protein 20
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 20115 bases
Position: chrCCOE01001390.1:1275725-1295839
Accession: 27424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000021110	zf-met	PF12874.7	7.6e-05	1	1
ENSACIP00000021126	zf-met	PF12874.7	8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000021659	RBM20-201	2664	-	ENSACIP00000021110	887 (aa)	-	-
ENSACIT00000021675	RBM20-202	2958	-	ENSACIP00000021126	985 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016368	RBM20	95	91.071	ENSAPOG00000011327	RBM20	91	91.071	Acanthochromis_polyacanthus
ENSACIG00000016368	RBM20	98	85.000	ENSAOCG00000018378	RBM20	86	85.000	Amphiprion_ocellaris
ENSACIG00000016368	RBM20	91	78.378	ENSATEG00000008782	RBM20	99	78.378	Anabas_testudineus
ENSACIG00000016368	RBM20	96	91.228	ENSACLG00000025652	RBM20	82	91.228	Astatotilapia_calliptera
ENSACIG00000016368	RBM20	90	83.333	ENSELUG00000022906	RBM20	84	83.333	Esox_lucius
ENSACIG00000016368	RBM20	96	92.982	ENSHBUG00000016743	RBM20	82	92.982	Haplochromis_burtoni
ENSACIG00000016368	RBM20	99	63.043	ENSKMAG00000020318	RBM20	87	65.644	Kryptolebias_marmoratus
ENSACIG00000016368	RBM20	97	59.184	ENSLACG00000012822	RBM20	85	59.184	Latimeria_chalumnae
ENSACIG00000016368	RBM20	99	84.746	ENSMAMG00000014492	RBM20	88	84.746	Mastacembelus_armatus
ENSACIG00000016368	RBM20	96	91.228	ENSMZEG00005003037	RBM20	85	91.228	Maylandia_zebra
ENSACIG00000016368	RBM20	85	82.222	ENSMMOG00000021599	RBM20	92	82.222	Mola_mola
ENSACIG00000016368	RBM20	90	72.464	ENSMODG00000010399	RBM20	74	72.464	Monodelphis_domestica
ENSACIG00000016368	RBM20	98	92.982	ENSNBRG00000003302	RBM20	85	92.982	Neolamprologus_brichardi
ENSACIG00000016368	RBM20	99	73.433	ENSONIG00000016294	RBM20	99	75.887	Oreochromis_niloticus
ENSACIG00000016368	RBM20	88	85.714	ENSPKIG00000017337	RBM20	80	85.714	Paramormyrops_kingsleyae
ENSACIG00000016368	RBM20	96	92.982	ENSPNYG00000002118	RBM20	82	92.982	Pundamilia_nyererei
ENSACIG00000016368	RBM20	99	64.299	ENSSMAG00000001397	RBM20	92	64.558	Scophthalmus_maximus
ENSACIG00000016368	RBM20	98	81.667	ENSSDUG00000010084	RBM20	86	81.667	Seriola_dumerili
ENSACIG00000016368	RBM20	99	67.854	ENSSLDG00000012344	RBM20	94	66.269	Seriola_lalandi_dorsalis
ENSACIG00000016368	RBM20	98	86.667	ENSSPAG00000005114	RBM20	95	63.290	Stegastes_partitus