EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000016482 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA binding motif protein 4.1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 1982 bases
Position: chrCCOE01000563.1:421582-423563
Accession: ZDB-GENE-030131-3902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000021245	zf-CCHC	PF00098.23	4.5e-08	1	1
ENSACIP00000021245	RRM_5	PF13893.6	7.5e-08	1	1
ENSACIP00000021245	RRM_1	PF00076.22	4.5e-31	1	2
ENSACIP00000021245	RRM_1	PF00076.22	4.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000021794	-	1260	-	ENSACIP00000021245	419 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000016482	rbm4.1	66	57.333	ENSACIG00000021311	-	94	51.381
ENSACIG00000016482	rbm4.1	67	55.921	ENSACIG00000021295	rbm4.3	91	55.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016482	rbm4.1	100	91.449	ENSAPOG00000012353	rbm4.1	100	91.449	Acanthochromis_polyacanthus
ENSACIG00000016482	rbm4.1	100	92.399	ENSAOCG00000010915	rbm4.1	100	92.399	Amphiprion_ocellaris
ENSACIG00000016482	rbm4.1	100	92.399	ENSAPEG00000009494	rbm4.1	100	92.399	Amphiprion_percula
ENSACIG00000016482	rbm4.1	100	91.211	ENSATEG00000001904	rbm4.1	100	91.211	Anabas_testudineus
ENSACIG00000016482	rbm4.1	100	97.375	ENSACLG00000007722	rbm4.1	100	97.375	Astatotilapia_calliptera
ENSACIG00000016482	rbm4.1	99	47.242	ENSACLG00000007740	-	97	44.976	Astatotilapia_calliptera
ENSACIG00000016482	rbm4.1	100	62.233	ENSAMXG00000036611	rbm4.1	100	63.507	Astyanax_mexicanus
ENSACIG00000016482	rbm4.1	99	49.173	ENSCSEG00000014359	-	97	48.325	Cynoglossus_semilaevis
ENSACIG00000016482	rbm4.1	100	76.134	ENSCSEG00000014365	rbm4.1	100	76.134	Cynoglossus_semilaevis
ENSACIG00000016482	rbm4.1	100	79.335	ENSCVAG00000019349	rbm4.1	100	79.335	Cyprinodon_variegatus
ENSACIG00000016482	rbm4.1	100	70.213	ENSDARG00000036386	rbm4.1	100	69.740	Danio_rerio
ENSACIG00000016482	rbm4.1	100	51.887	ENSDARG00000055080	rbm4.2	100	52.113	Danio_rerio
ENSACIG00000016482	rbm4.1	100	66.745	ENSELUG00000013205	rbm4.1	100	64.679	Esox_lucius
ENSACIG00000016482	rbm4.1	100	79.858	ENSFHEG00000022926	rbm4.1	100	79.621	Fundulus_heteroclitus
ENSACIG00000016482	rbm4.1	92	50.891	ENSGMOG00000007455	-	96	48.921	Gadus_morhua
ENSACIG00000016482	rbm4.1	100	67.840	ENSGMOG00000007464	rbm4.1	100	69.249	Gadus_morhua
ENSACIG00000016482	rbm4.1	100	77.778	ENSGAFG00000019302	rbm4.1	100	77.305	Gambusia_affinis
ENSACIG00000016482	rbm4.1	100	77.962	ENSGACG00000000822	rbm4.1	100	77.962	Gasterosteus_aculeatus
ENSACIG00000016482	rbm4.1	97	47.962	ENSGACG00000000821	-	97	47.086	Gasterosteus_aculeatus
ENSACIG00000016482	rbm4.1	100	97.375	ENSHBUG00000011610	rbm4.1	100	97.375	Haplochromis_burtoni
ENSACIG00000016482	rbm4.1	96	71.007	ENSHCOG00000011403	rbm4.1	98	71.500	Hippocampus_comes
ENSACIG00000016482	rbm4.1	100	62.385	ENSIPUG00000022931	rbm4.1	100	63.470	Ictalurus_punctatus
ENSACIG00000016482	rbm4.1	100	50.118	ENSIPUG00000022937	rbm4.2	100	49.302	Ictalurus_punctatus
ENSACIG00000016482	rbm4.1	100	79.433	ENSKMAG00000006556	rbm4.1	100	79.433	Kryptolebias_marmoratus
ENSACIG00000016482	rbm4.1	99	48.235	ENSLBEG00000019756	-	90	60.897	Labrus_bergylta
ENSACIG00000016482	rbm4.1	100	84.086	ENSLBEG00000019782	rbm4.1	100	84.086	Labrus_bergylta
ENSACIG00000016482	rbm4.1	98	50.355	ENSMAMG00000001760	-	98	48.578	Mastacembelus_armatus
ENSACIG00000016482	rbm4.1	100	91.924	ENSMAMG00000001765	rbm4.1	100	91.924	Mastacembelus_armatus
ENSACIG00000016482	rbm4.1	100	97.375	ENSMZEG00005009205	rbm4.1	100	97.375	Maylandia_zebra
ENSACIG00000016482	rbm4.1	100	88.180	ENSMMOG00000020479	rbm4.1	100	87.470	Mola_mola
ENSACIG00000016482	rbm4.1	100	89.549	ENSMALG00000020544	rbm4.1	100	89.549	Monopterus_albus
ENSACIG00000016482	rbm4.1	98	49.192	ENSMALG00000020557	-	98	48.936	Monopterus_albus
ENSACIG00000016482	rbm4.1	100	97.613	ENSNBRG00000017755	rbm4.1	100	97.613	Neolamprologus_brichardi
ENSACIG00000016482	rbm4.1	100	97.852	ENSONIG00000015730	rbm4.1	100	97.852	Oreochromis_niloticus
ENSACIG00000016482	rbm4.1	100	78.860	ENSORLG00000012496	rbm4.1	100	78.860	Oryzias_latipes
ENSACIG00000016482	rbm4.1	100	78.860	ENSORLG00020012454	rbm4.1	100	78.860	Oryzias_latipes_hni
ENSACIG00000016482	rbm4.1	100	79.097	ENSORLG00015013678	rbm4.1	100	79.097	Oryzias_latipes_hsok
ENSACIG00000016482	rbm4.1	100	79.810	ENSOMEG00000001001	rbm4.1	100	79.810	Oryzias_melastigma
ENSACIG00000016482	rbm4.1	100	65.187	ENSPKIG00000020805	rbm4.1	100	64.486	Paramormyrops_kingsleyae
ENSACIG00000016482	rbm4.1	99	47.596	ENSPFOG00000012685	-	99	45.433	Poecilia_formosa
ENSACIG00000016482	rbm4.1	100	78.014	ENSPFOG00000012675	rbm4.1	100	77.541	Poecilia_formosa
ENSACIG00000016482	rbm4.1	100	78.014	ENSPLAG00000018572	rbm4.1	100	77.541	Poecilia_latipinna
ENSACIG00000016482	rbm4.1	100	78.014	ENSPMEG00000006290	rbm4.1	100	77.541	Poecilia_mexicana
ENSACIG00000016482	rbm4.1	99	45.913	ENSPREG00000003764	-	87	65.761	Poecilia_reticulata
ENSACIG00000016482	rbm4.1	100	78.014	ENSPREG00000003724	rbm4.1	100	77.541	Poecilia_reticulata
ENSACIG00000016482	rbm4.1	100	97.375	ENSPNYG00000004662	rbm4.1	100	97.375	Pundamilia_nyererei
ENSACIG00000016482	rbm4.1	100	68.000	ENSPNAG00000002539	rbm4.1	100	68.000	Pygocentrus_nattereri
ENSACIG00000016482	rbm4.1	100	51.395	ENSPNAG00000013057	rbm4.2	100	51.408	Pygocentrus_nattereri
ENSACIG00000016482	rbm4.1	100	64.720	ENSSFOG00015021996	sf1	100	64.019	Scleropages_formosus
ENSACIG00000016482	rbm4.1	100	85.273	ENSSMAG00000007571	rbm4.1	100	83.610	Scophthalmus_maximus
ENSACIG00000016482	rbm4.1	97	51.675	ENSSDUG00000003936	-	99	50.117	Seriola_dumerili
ENSACIG00000016482	rbm4.1	100	92.874	ENSSDUG00000003925	rbm4.1	100	92.874	Seriola_dumerili
ENSACIG00000016482	rbm4.1	97	49.398	ENSSLDG00000013157	-	99	49.764	Seriola_lalandi_dorsalis
ENSACIG00000016482	rbm4.1	100	92.874	ENSSLDG00000013147	rbm4.1	100	92.874	Seriola_lalandi_dorsalis
ENSACIG00000016482	rbm4.1	99	48.687	ENSSPAG00000019046	-	99	45.727	Stegastes_partitus
ENSACIG00000016482	rbm4.1	100	92.891	ENSSPAG00000019053	rbm4.1	100	94.787	Stegastes_partitus
ENSACIG00000016482	rbm4.1	100	80.285	ENSTRUG00000013334	rbm4.1	100	79.335	Takifugu_rubripes
ENSACIG00000016482	rbm4.1	99	48.317	ENSTRUG00000013328	-	99	45.775	Takifugu_rubripes
ENSACIG00000016482	rbm4.1	78	89.216	ENSTNIG00000004821	rbm4.1	97	92.268	Tetraodon_nigroviridis
ENSACIG00000016482	rbm4.1	100	78.014	ENSXCOG00000003731	rbm4.1	100	77.541	Xiphophorus_couchianus
ENSACIG00000016482	rbm4.1	100	77.778	ENSXMAG00000008069	rbm4.1	100	77.305	Xiphophorus_maculatus
ENSACIG00000016482	rbm4.1	99	64.467	ENSXMAG00000008059	-	86	67.391	Xiphophorus_maculatus