EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000016487 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 22052 bases
Position: chrCCOE01001624.1:953476-975527
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000021296	CPSF_A	PF03178.15	3.1e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000021845	-	3264	-	ENSACIP00000021296	1087 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016487's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016487	sf3b3	100	90.625	ENSG00000189091	SF3B3	97	90.909	Homo_sapiens
ENSACIG00000016487	sf3b3	96	95.531	ENSAPOG00000006172	sf3b3	90	95.531	Acanthochromis_polyacanthus
ENSACIG00000016487	sf3b3	100	90.714	ENSAMEG00000002187	SF3B3	92	90.714	Ailuropoda_melanoleuca
ENSACIG00000016487	sf3b3	100	95.804	ENSAOCG00000007158	sf3b3	92	95.804	Amphiprion_ocellaris
ENSACIG00000016487	sf3b3	100	95.804	ENSAPEG00000022786	sf3b3	92	95.804	Amphiprion_percula
ENSACIG00000016487	sf3b3	100	95.804	ENSATEG00000013708	sf3b3	92	95.804	Anabas_testudineus
ENSACIG00000016487	sf3b3	82	94.589	ENSAPLG00000004996	SF3B3	90	94.589	Anas_platyrhynchos
ENSACIG00000016487	sf3b3	100	90.714	ENSACAG00000001817	SF3B3	92	90.714	Anolis_carolinensis
ENSACIG00000016487	sf3b3	100	90.625	ENSANAG00000028001	SF3B3	92	90.625	Aotus_nancymaae
ENSACIG00000016487	sf3b3	100	99.356	ENSACLG00000022555	sf3b3	100	99.356	Astatotilapia_calliptera
ENSACIG00000016487	sf3b3	100	94.643	ENSAMXG00000003410	sf3b3	92	94.643	Astyanax_mexicanus
ENSACIG00000016487	sf3b3	100	91.840	ENSBTAG00000010627	SF3B3	92	91.840	Bos_taurus
ENSACIG00000016487	sf3b3	99	58.164	WBGene00019323	teg-4	92	58.164	Caenorhabditis_elegans
ENSACIG00000016487	sf3b3	100	91.444	ENSCJAG00000014773	SF3B3	100	91.444	Callithrix_jacchus
ENSACIG00000016487	sf3b3	100	90.714	ENSCAFG00000020151	SF3B3	92	90.714	Canis_familiaris
ENSACIG00000016487	sf3b3	100	90.714	ENSCAFG00020020912	SF3B3	92	90.714	Canis_lupus_dingo
ENSACIG00000016487	sf3b3	100	90.714	ENSCHIG00000019822	SF3B3	92	90.714	Capra_hircus
ENSACIG00000016487	sf3b3	100	90.625	ENSTSYG00000007910	SF3B3	92	90.625	Carlito_syrichta
ENSACIG00000016487	sf3b3	82	73.227	ENSCAPG00000001484	SF3B3	82	73.227	Cavia_aperea
ENSACIG00000016487	sf3b3	100	89.286	ENSCPOG00000000586	SF3B3	92	89.286	Cavia_porcellus
ENSACIG00000016487	sf3b3	100	90.625	ENSCCAG00000017736	SF3B3	92	90.625	Cebus_capucinus
ENSACIG00000016487	sf3b3	100	90.625	ENSCATG00000036562	SF3B3	92	90.625	Cercocebus_atys
ENSACIG00000016487	sf3b3	100	90.625	ENSCLAG00000003921	SF3B3	92	90.625	Chinchilla_lanigera
ENSACIG00000016487	sf3b3	100	90.625	ENSCSAG00000004371	SF3B3	92	90.625	Chlorocebus_sabaeus
ENSACIG00000016487	sf3b3	89	88.839	ENSCHOG00000001878	SF3B3	82	88.839	Choloepus_hoffmanni
ENSACIG00000016487	sf3b3	100	90.268	ENSCPBG00000015853	SF3B3	92	90.268	Chrysemys_picta_bellii
ENSACIG00000016487	sf3b3	99	78.125	ENSCING00000001342	-	92	78.125	Ciona_intestinalis
ENSACIG00000016487	sf3b3	99	78.600	ENSCSAVG00000011454	-	92	76.964	Ciona_savignyi
ENSACIG00000016487	sf3b3	100	89.071	ENSCANG00000042920	SF3B3	92	89.253	Colobus_angolensis_palliatus
ENSACIG00000016487	sf3b3	100	90.536	ENSCGRG00001015908	Sf3b3	92	90.536	Cricetulus_griseus_chok1gshd
ENSACIG00000016487	sf3b3	100	90.536	ENSCGRG00000010180	Sf3b3	92	90.536	Cricetulus_griseus_crigri
ENSACIG00000016487	sf3b3	83	96.354	ENSCSEG00000014192	sf3b3	90	96.354	Cynoglossus_semilaevis
ENSACIG00000016487	sf3b3	99	95.174	ENSCVAG00000010459	sf3b3	92	95.174	Cyprinodon_variegatus
ENSACIG00000016487	sf3b3	100	94.464	ENSDARG00000103553	sf3b3	92	94.464	Danio_rerio
ENSACIG00000016487	sf3b3	92	89.971	ENSDNOG00000043626	SF3B3	100	89.971	Dasypus_novemcinctus
ENSACIG00000016487	sf3b3	100	90.625	ENSDORG00000014176	Sf3b3	92	90.625	Dipodomys_ordii
ENSACIG00000016487	sf3b3	99	72.173	FBgn0035162	Sf3b3	92	72.173	Drosophila_melanogaster
ENSACIG00000016487	sf3b3	78	98.571	ENSETEG00000002729	SF3B3	70	98.571	Echinops_telfairi
ENSACIG00000016487	sf3b3	99	83.914	ENSEBUG00000006117	sf3b3	92	83.914	Eptatretus_burgeri
ENSACIG00000016487	sf3b3	100	90.714	ENSEASG00005013376	SF3B3	92	90.714	Equus_asinus_asinus
ENSACIG00000016487	sf3b3	100	90.714	ENSECAG00000014053	SF3B3	92	90.714	Equus_caballus
ENSACIG00000016487	sf3b3	92	93.023	ENSEEUG00000015611	SF3B3	85	93.023	Erinaceus_europaeus
ENSACIG00000016487	sf3b3	100	92.965	ENSELUG00000015417	sf3b3	92	92.965	Esox_lucius
ENSACIG00000016487	sf3b3	100	90.714	ENSFCAG00000009487	SF3B3	92	90.714	Felis_catus
ENSACIG00000016487	sf3b3	100	90.357	ENSFALG00000007372	SF3B3	92	90.357	Ficedula_albicollis
ENSACIG00000016487	sf3b3	100	90.625	ENSFDAG00000002608	SF3B3	92	90.625	Fukomys_damarensis
ENSACIG00000016487	sf3b3	99	95.889	ENSFHEG00000017824	sf3b3	93	95.889	Fundulus_heteroclitus
ENSACIG00000016487	sf3b3	100	90.455	ENSGMOG00000008139	sf3b3	92	90.455	Gadus_morhua
ENSACIG00000016487	sf3b3	100	90.625	ENSGALG00000002531	SF3B3	92	90.625	Gallus_gallus
ENSACIG00000016487	sf3b3	99	95.442	ENSGAFG00000015206	sf3b3	89	98.533	Gambusia_affinis
ENSACIG00000016487	sf3b3	100	95.183	ENSGACG00000002646	sf3b3	92	95.183	Gasterosteus_aculeatus
ENSACIG00000016487	sf3b3	96	90.317	ENSGAGG00000006746	SF3B3	89	90.317	Gopherus_agassizii
ENSACIG00000016487	sf3b3	100	90.625	ENSGGOG00000003246	SF3B3	92	90.625	Gorilla_gorilla
ENSACIG00000016487	sf3b3	100	95.124	ENSHBUG00000005960	sf3b3	100	95.124	Haplochromis_burtoni
ENSACIG00000016487	sf3b3	100	90.625	ENSHGLG00000010135	SF3B3	92	90.625	Heterocephalus_glaber_female
ENSACIG00000016487	sf3b3	100	88.380	ENSHGLG00100011148	SF3B3	92	88.380	Heterocephalus_glaber_male
ENSACIG00000016487	sf3b3	100	96.051	ENSHCOG00000011981	sf3b3	100	96.051	Hippocampus_comes
ENSACIG00000016487	sf3b3	100	94.643	ENSIPUG00000020435	sf3b3	92	94.643	Ictalurus_punctatus
ENSACIG00000016487	sf3b3	100	90.625	ENSSTOG00000007065	SF3B3	92	90.625	Ictidomys_tridecemlineatus
ENSACIG00000016487	sf3b3	100	90.625	ENSJJAG00000003948	Sf3b3	92	90.625	Jaculus_jaculus
ENSACIG00000016487	sf3b3	99	93.029	ENSKMAG00000004066	sf3b3	90	95.247	Kryptolebias_marmoratus
ENSACIG00000016487	sf3b3	100	95.625	ENSLBEG00000018302	sf3b3	92	95.625	Labrus_bergylta
ENSACIG00000016487	sf3b3	100	87.323	ENSLACG00000012501	SF3B3	94	87.323	Latimeria_chalumnae
ENSACIG00000016487	sf3b3	100	93.934	ENSLOCG00000007566	sf3b3	92	93.934	Lepisosteus_oculatus
ENSACIG00000016487	sf3b3	100	90.714	ENSLAFG00000012219	SF3B3	100	88.555	Loxodonta_africana
ENSACIG00000016487	sf3b3	100	90.625	ENSMFAG00000045487	SF3B3	92	90.625	Macaca_fascicularis
ENSACIG00000016487	sf3b3	100	90.625	ENSMMUG00000017812	SF3B3	92	90.625	Macaca_mulatta
ENSACIG00000016487	sf3b3	100	90.625	ENSMNEG00000033385	SF3B3	92	90.625	Macaca_nemestrina
ENSACIG00000016487	sf3b3	100	86.786	ENSMLEG00000043891	SF3B3	92	86.786	Mandrillus_leucophaeus
ENSACIG00000016487	sf3b3	100	95.804	ENSMAMG00000016837	sf3b3	92	95.804	Mastacembelus_armatus
ENSACIG00000016487	sf3b3	96	99.332	ENSMZEG00005026015	sf3b3	99	99.332	Maylandia_zebra
ENSACIG00000016487	sf3b3	100	99.356	ENSMZEG00005010836	sf3b3	100	99.356	Maylandia_zebra
ENSACIG00000016487	sf3b3	100	90.625	ENSMGAG00000001597	SF3B3	92	90.625	Meleagris_gallopavo
ENSACIG00000016487	sf3b3	81	76.136	ENSMAUG00000013618	Sf3b3	87	76.136	Mesocricetus_auratus
ENSACIG00000016487	sf3b3	100	89.572	ENSMICG00000001363	SF3B3	92	89.572	Microcebus_murinus
ENSACIG00000016487	sf3b3	100	90.536	ENSMOCG00000006108	Sf3b3	92	90.536	Microtus_ochrogaster
ENSACIG00000016487	sf3b3	96	98.760	ENSMMOG00000002598	sf3b3	97	98.760	Mola_mola
ENSACIG00000016487	sf3b3	100	86.351	ENSMODG00000014363	SF3B3	92	86.351	Monodelphis_domestica
ENSACIG00000016487	sf3b3	100	95.179	ENSMALG00000008014	sf3b3	92	95.179	Monopterus_albus
ENSACIG00000016487	sf3b3	100	90.625	MGP_CAROLIEiJ_G0031563	Sf3b3	92	90.625	Mus_caroli
ENSACIG00000016487	sf3b3	100	90.536	ENSMUSG00000033732	Sf3b3	92	90.536	Mus_musculus
ENSACIG00000016487	sf3b3	100	90.446	MGP_SPRETEiJ_G0032681	Sf3b3	92	90.446	Mus_spretus
ENSACIG00000016487	sf3b3	100	90.714	ENSMPUG00000010277	SF3B3	92	90.714	Mustela_putorius_furo
ENSACIG00000016487	sf3b3	100	90.625	ENSMLUG00000014607	SF3B3	92	90.625	Myotis_lucifugus
ENSACIG00000016487	sf3b3	100	90.625	ENSNGAG00000021903	Sf3b3	92	90.625	Nannospalax_galili
ENSACIG00000016487	sf3b3	90	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSACIG00000016487	sf3b3	100	89.295	ENSNLEG00000016127	SF3B3	92	89.295	Nomascus_leucogenys
ENSACIG00000016487	sf3b3	92	88.444	ENSMEUG00000004479	SF3B3	86	88.444	Notamacropus_eugenii
ENSACIG00000016487	sf3b3	100	87.143	ENSOPRG00000009847	SF3B3	94	87.143	Ochotona_princeps
ENSACIG00000016487	sf3b3	100	90.625	ENSODEG00000014154	SF3B3	92	90.625	Octodon_degus
ENSACIG00000016487	sf3b3	100	96.250	ENSONIG00000011198	sf3b3	92	96.250	Oreochromis_niloticus
ENSACIG00000016487	sf3b3	100	90.804	ENSOANG00000001161	-	92	90.804	Ornithorhynchus_anatinus
ENSACIG00000016487	sf3b3	100	88.482	ENSOCUG00000004139	SF3B3	92	88.482	Oryctolagus_cuniculus
ENSACIG00000016487	sf3b3	100	97.792	ENSORLG00000013472	sf3b3	100	97.792	Oryzias_latipes
ENSACIG00000016487	sf3b3	100	97.792	ENSORLG00020017473	sf3b3	100	97.792	Oryzias_latipes_hni
ENSACIG00000016487	sf3b3	100	97.792	ENSORLG00015007710	sf3b3	100	97.792	Oryzias_latipes_hsok
ENSACIG00000016487	sf3b3	100	94.911	ENSOMEG00000014483	sf3b3	92	94.911	Oryzias_melastigma
ENSACIG00000016487	sf3b3	100	90.536	ENSOGAG00000016051	SF3B3	92	90.536	Otolemur_garnettii
ENSACIG00000016487	sf3b3	100	90.472	ENSOARG00000004816	SF3B3	92	90.472	Ovis_aries
ENSACIG00000016487	sf3b3	100	90.625	ENSPPAG00000026807	SF3B3	92	90.625	Pan_paniscus
ENSACIG00000016487	sf3b3	100	90.714	ENSPPRG00000001686	SF3B3	92	90.714	Panthera_pardus
ENSACIG00000016487	sf3b3	97	93.264	ENSPTIG00000020382	SF3B3	100	93.264	Panthera_tigris_altaica
ENSACIG00000016487	sf3b3	100	90.625	ENSPTRG00000008308	SF3B3	92	90.625	Pan_troglodytes
ENSACIG00000016487	sf3b3	100	90.625	ENSPANG00000024075	SF3B3	92	90.625	Papio_anubis
ENSACIG00000016487	sf3b3	100	96.872	ENSPKIG00000002712	sf3b3	100	96.872	Paramormyrops_kingsleyae
ENSACIG00000016487	sf3b3	97	90.248	ENSPSIG00000002232	SF3B3	100	90.248	Pelodiscus_sinensis
ENSACIG00000016487	sf3b3	100	90.536	ENSPEMG00000008603	Sf3b3	92	90.536	Peromyscus_maniculatus_bairdii
ENSACIG00000016487	sf3b3	99	88.204	ENSPMAG00000001793	sf3b3	92	88.204	Petromyzon_marinus
ENSACIG00000016487	sf3b3	100	90.804	ENSPCIG00000014927	SF3B3	96	90.804	Phascolarctos_cinereus
ENSACIG00000016487	sf3b3	99	95.710	ENSPFOG00000015516	sf3b3	92	95.710	Poecilia_formosa
ENSACIG00000016487	sf3b3	99	95.710	ENSPLAG00000014330	sf3b3	92	95.710	Poecilia_latipinna
ENSACIG00000016487	sf3b3	99	95.800	ENSPMEG00000019856	sf3b3	92	95.800	Poecilia_mexicana
ENSACIG00000016487	sf3b3	82	98.758	ENSPREG00000019669	sf3b3	87	98.758	Poecilia_reticulata
ENSACIG00000016487	sf3b3	95	97.297	ENSPPYG00000007539	SF3B3	92	97.297	Pongo_abelii
ENSACIG00000016487	sf3b3	100	70.982	ENSPCAG00000002623	SF3B3	92	70.982	Procavia_capensis
ENSACIG00000016487	sf3b3	83	96.491	ENSPCOG00000026582	SF3B3	91	96.491	Propithecus_coquereli
ENSACIG00000016487	sf3b3	100	90.625	ENSPVAG00000000684	SF3B3	92	90.625	Pteropus_vampyrus
ENSACIG00000016487	sf3b3	100	99.264	ENSPNYG00000003528	sf3b3	100	99.264	Pundamilia_nyererei
ENSACIG00000016487	sf3b3	100	94.375	ENSPNAG00000015419	sf3b3	92	94.375	Pygocentrus_nattereri
ENSACIG00000016487	sf3b3	100	90.536	ENSRNOG00000017724	Sf3b3	92	90.536	Rattus_norvegicus
ENSACIG00000016487	sf3b3	100	90.625	ENSRBIG00000021904	SF3B3	92	90.625	Rhinopithecus_bieti
ENSACIG00000016487	sf3b3	100	90.625	ENSRROG00000045703	SF3B3	92	90.625	Rhinopithecus_roxellana
ENSACIG00000016487	sf3b3	81	41.935	YML049C	-	75	41.935	Saccharomyces_cerevisiae
ENSACIG00000016487	sf3b3	100	90.625	ENSSBOG00000029156	SF3B3	92	90.625	Saimiri_boliviensis_boliviensis
ENSACIG00000016487	sf3b3	100	90.804	ENSSHAG00000000372	SF3B3	96	90.804	Sarcophilus_harrisii
ENSACIG00000016487	sf3b3	100	96.872	ENSSFOG00015012877	sf3b3	100	96.872	Scleropages_formosus
ENSACIG00000016487	sf3b3	100	94.732	ENSSMAG00000014386	sf3b3	92	94.732	Scophthalmus_maximus
ENSACIG00000016487	sf3b3	100	95.804	ENSSDUG00000021201	sf3b3	92	95.804	Seriola_dumerili
ENSACIG00000016487	sf3b3	100	95.804	ENSSLDG00000017532	sf3b3	92	95.804	Seriola_lalandi_dorsalis
ENSACIG00000016487	sf3b3	93	92.842	ENSSARG00000006917	SF3B3	83	92.842	Sorex_araneus
ENSACIG00000016487	sf3b3	100	90.357	ENSSPUG00000006253	SF3B3	92	90.357	Sphenodon_punctatus
ENSACIG00000016487	sf3b3	100	87.321	ENSSPAG00000003125	sf3b3	92	87.321	Stegastes_partitus
ENSACIG00000016487	sf3b3	100	93.468	ENSSSCG00000025323	SF3B3	100	93.468	Sus_scrofa
ENSACIG00000016487	sf3b3	100	90.544	ENSTGUG00000006082	SF3B3	92	90.544	Taeniopygia_guttata
ENSACIG00000016487	sf3b3	61	80.728	ENSTRUG00000015623	sf3b3	96	80.728	Takifugu_rubripes
ENSACIG00000016487	sf3b3	89	97.303	ENSTNIG00000004857	sf3b3	89	97.303	Tetraodon_nigroviridis
ENSACIG00000016487	sf3b3	93	74.976	ENSTBEG00000002946	SF3B3	91	74.976	Tupaia_belangeri
ENSACIG00000016487	sf3b3	100	89.821	ENSTTRG00000005855	SF3B3	92	89.821	Tursiops_truncatus
ENSACIG00000016487	sf3b3	100	90.714	ENSUAMG00000006780	SF3B3	92	90.714	Ursus_americanus
ENSACIG00000016487	sf3b3	100	90.714	ENSUMAG00000017757	SF3B3	92	90.714	Ursus_maritimus
ENSACIG00000016487	sf3b3	100	74.286	ENSVPAG00000003202	SF3B3	92	74.286	Vicugna_pacos
ENSACIG00000016487	sf3b3	100	90.714	ENSVVUG00000017922	SF3B3	92	90.714	Vulpes_vulpes
ENSACIG00000016487	sf3b3	100	90.893	ENSXETG00000032869	SF3B3	92	90.893	Xenopus_tropicalis
ENSACIG00000016487	sf3b3	78	98.934	ENSXCOG00000013628	sf3b3	86	98.934	Xiphophorus_couchianus
ENSACIG00000016487	sf3b3	99	95.621	ENSXMAG00000006334	sf3b3	89	98.758	Xiphophorus_maculatus