EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000016514 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 9671 bases
Position: chrCCOE01000563.1:426432-436102
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000021298	zf-CCHC	PF00098.23	0.00042	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000021847	-	1911	-	ENSACIP00000021298	636 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016514	sf1	69	86.250	ENSAPOG00000012341	sf1	67	87.033	Acanthochromis_polyacanthus
ENSACIG00000016514	sf1	87	65.167	ENSANAG00000022607	-	88	74.863	Aotus_nancymaae
ENSACIG00000016514	sf1	63	78.125	ENSANAG00000026664	-	89	82.713	Aotus_nancymaae
ENSACIG00000016514	sf1	100	95.378	ENSACLG00000007633	sf1	100	95.378	Astatotilapia_calliptera
ENSACIG00000016514	sf1	62	78.043	ENSBTAG00000001035	SF1	62	82.713	Bos_taurus
ENSACIG00000016514	sf1	62	78.043	ENSCJAG00000002780	SF1	58	82.713	Callithrix_jacchus
ENSACIG00000016514	sf1	62	78.043	ENSCAFG00000014239	SF1	58	82.713	Canis_familiaris
ENSACIG00000016514	sf1	62	78.043	ENSCAFG00020014381	SF1	58	82.713	Canis_lupus_dingo
ENSACIG00000016514	sf1	62	78.043	ENSCHIG00000025867	SF1	58	82.713	Capra_hircus
ENSACIG00000016514	sf1	61	79.115	ENSCAPG00000010762	SF1	65	84.196	Cavia_aperea
ENSACIG00000016514	sf1	61	79.115	ENSCPOG00000012290	SF1	58	84.196	Cavia_porcellus
ENSACIG00000016514	sf1	63	77.751	ENSCCAG00000037881	SF1	89	82.713	Cebus_capucinus
ENSACIG00000016514	sf1	62	69.712	ENSCCAG00000023781	-	83	72.606	Cebus_capucinus
ENSACIG00000016514	sf1	62	78.043	ENSCATG00000011564	SF1	89	82.713	Cercocebus_atys
ENSACIG00000016514	sf1	59	73.924	ENSCHOG00000006008	SF1	66	78.409	Choloepus_hoffmanni
ENSACIG00000016514	sf1	58	55.314	ENSCING00000005564	-	92	53.159	Ciona_intestinalis
ENSACIG00000016514	sf1	56	53.989	ENSCSAVG00000009055	-	72	61.056	Ciona_savignyi
ENSACIG00000016514	sf1	62	78.043	ENSCANG00000042201	SF1	89	82.713	Colobus_angolensis_palliatus
ENSACIG00000016514	sf1	62	78.282	ENSCGRG00001003677	Sf1	65	83.245	Cricetulus_griseus_chok1gshd
ENSACIG00000016514	sf1	61	78.780	ENSCGRG00000001708	Sf1	65	84.196	Cricetulus_griseus_crigri
ENSACIG00000016514	sf1	66	85.307	ENSCVAG00000001670	sf1	67	85.307	Cyprinodon_variegatus
ENSACIG00000016514	sf1	88	78.846	ENSDARG00000008188	sf1	65	89.189	Danio_rerio
ENSACIG00000016514	sf1	62	78.043	ENSDORG00000016334	Sf1	58	82.713	Dipodomys_ordii
ENSACIG00000016514	sf1	61	72.277	ENSETEG00000012830	SF1	51	75.275	Echinops_telfairi
ENSACIG00000016514	sf1	55	78.202	ENSEEUG00000001058	SF1	83	85.015	Erinaceus_europaeus
ENSACIG00000016514	sf1	70	78.528	ENSELUG00000013225	sf1	60	80.568	Esox_lucius
ENSACIG00000016514	sf1	62	78.043	ENSFCAG00000012231	SF1	58	82.713	Felis_catus
ENSACIG00000016514	sf1	61	78.780	ENSFDAG00000009833	SF1	65	83.651	Fukomys_damarensis
ENSACIG00000016514	sf1	97	83.510	ENSFHEG00000022656	sf1	97	77.156	Fundulus_heteroclitus
ENSACIG00000016514	sf1	75	75.615	ENSGMOG00000007469	sf1	61	90.533	Gadus_morhua
ENSACIG00000016514	sf1	89	84.918	ENSGAFG00000019284	sf1	69	90.164	Gambusia_affinis
ENSACIG00000016514	sf1	64	82.452	ENSGAGG00000021691	SF1	68	70.021	Gopherus_agassizii
ENSACIG00000016514	sf1	97	90.347	ENSHBUG00000011598	sf1	97	87.632	Haplochromis_burtoni
ENSACIG00000016514	sf1	62	78.043	ENSHGLG00000009541	SF1	65	82.713	Heterocephalus_glaber_female
ENSACIG00000016514	sf1	58	71.960	ENSHGLG00100008255	-	70	78.779	Heterocephalus_glaber_male
ENSACIG00000016514	sf1	61	78.780	ENSHGLG00100013879	-	64	84.682	Heterocephalus_glaber_male
ENSACIG00000016514	sf1	55	73.003	ENSSTOG00000024353	-	66	74.521	Ictidomys_tridecemlineatus
ENSACIG00000016514	sf1	61	78.780	ENSSTOG00000009790	-	58	83.651	Ictidomys_tridecemlineatus
ENSACIG00000016514	sf1	62	78.282	ENSJJAG00000011788	Sf1	58	82.979	Jaculus_jaculus
ENSACIG00000016514	sf1	66	84.532	ENSKMAG00000005854	sf1	70	84.615	Kryptolebias_marmoratus
ENSACIG00000016514	sf1	85	85.621	ENSLBEG00000019836	sf1	72	85.746	Labrus_bergylta
ENSACIG00000016514	sf1	62	78.378	ENSLACG00000018493	SF1	67	78.919	Latimeria_chalumnae
ENSACIG00000016514	sf1	66	76.129	ENSLOCG00000002130	sf1	72	77.991	Lepisosteus_oculatus
ENSACIG00000016514	sf1	61	78.780	ENSLAFG00000007201	SF1	63	81.266	Loxodonta_africana
ENSACIG00000016514	sf1	62	78.043	ENSMFAG00000033122	SF1	89	82.713	Macaca_fascicularis
ENSACIG00000016514	sf1	62	78.043	ENSMMUG00000022606	SF1	89	83.651	Macaca_mulatta
ENSACIG00000016514	sf1	62	78.043	ENSMNEG00000037901	SF1	89	82.713	Macaca_nemestrina
ENSACIG00000016514	sf1	61	78.780	ENSMLEG00000040706	SF1	88	83.651	Mandrillus_leucophaeus
ENSACIG00000016514	sf1	100	91.056	ENSMZEG00005009196	sf1	100	91.056	Maylandia_zebra
ENSACIG00000016514	sf1	62	78.282	ENSMAUG00000014064	Sf1	65	83.245	Mesocricetus_auratus
ENSACIG00000016514	sf1	62	78.043	ENSMICG00000001202	SF1	89	82.493	Microcebus_murinus
ENSACIG00000016514	sf1	62	78.282	ENSMOCG00000022038	Sf1	65	83.245	Microtus_ochrogaster
ENSACIG00000016514	sf1	66	89.862	ENSMMOG00000020474	sf1	66	89.862	Mola_mola
ENSACIG00000016514	sf1	61	77.512	ENSMODG00000029407	SF1	79	83.924	Monodelphis_domestica
ENSACIG00000016514	sf1	66	95.444	ENSMALG00000020521	sf1	72	95.444	Monopterus_albus
ENSACIG00000016514	sf1	62	78.282	MGP_CAROLIEiJ_G0022607	Sf1	99	93.609	Mus_caroli
ENSACIG00000016514	sf1	62	78.282	ENSMUSG00000024949	Sf1	99	93.609	Mus_musculus
ENSACIG00000016514	sf1	62	78.282	MGP_PahariEiJ_G0014101	Sf1	99	93.609	Mus_pahari
ENSACIG00000016514	sf1	62	78.282	MGP_SPRETEiJ_G0023518	Sf1	99	93.609	Mus_spretus
ENSACIG00000016514	sf1	61	78.378	ENSMPUG00000012684	SF1	58	82.667	Mustela_putorius_furo
ENSACIG00000016514	sf1	66	73.438	ENSMLUG00000029800	-	64	79.733	Myotis_lucifugus
ENSACIG00000016514	sf1	62	76.471	ENSMLUG00000015217	-	58	83.467	Myotis_lucifugus
ENSACIG00000016514	sf1	62	78.282	ENSNGAG00000005550	Sf1	65	82.979	Nannospalax_galili
ENSACIG00000016514	sf1	100	95.216	ENSNBRG00000017606	sf1	100	95.216	Neolamprologus_brichardi
ENSACIG00000016514	sf1	62	78.043	ENSNLEG00000005236	-	89	82.713	Nomascus_leucogenys
ENSACIG00000016514	sf1	61	77.536	ENSMEUG00000013424	SF1	68	84.341	Notamacropus_eugenii
ENSACIG00000016514	sf1	97	90.347	ENSONIG00000015728	sf1	97	87.632	Oreochromis_niloticus
ENSACIG00000016514	sf1	51	74.566	ENSOANG00000002909	SF1	75	78.689	Ornithorhynchus_anatinus
ENSACIG00000016514	sf1	61	78.780	ENSOCUG00000026486	SF1	59	82.620	Oryctolagus_cuniculus
ENSACIG00000016514	sf1	62	78.043	ENSOGAG00000016196	SF1	59	82.713	Otolemur_garnettii
ENSACIG00000016514	sf1	62	78.043	ENSOARG00000009166	SF1	65	82.713	Ovis_aries
ENSACIG00000016514	sf1	62	79.469	ENSPPAG00000002799	-	91	82.447	Pan_paniscus
ENSACIG00000016514	sf1	61	78.780	ENSPPRG00000013566	SF1	57	84.746	Panthera_pardus
ENSACIG00000016514	sf1	63	77.305	ENSPTIG00000016141	SF1	67	82.493	Panthera_tigris_altaica
ENSACIG00000016514	sf1	64	77.986	ENSPTRG00000003846	SF1	89	82.713	Pan_troglodytes
ENSACIG00000016514	sf1	62	77.804	ENSPANG00000020754	SF1	89	82.713	Papio_anubis
ENSACIG00000016514	sf1	51	80.896	ENSPKIG00000012116	sf1	78	82.566	Paramormyrops_kingsleyae
ENSACIG00000016514	sf1	62	78.282	ENSPEMG00000010463	Sf1	65	83.245	Peromyscus_maniculatus_bairdii
ENSACIG00000016514	sf1	62	78.365	ENSPCIG00000018173	SF1	60	83.245	Phascolarctos_cinereus
ENSACIG00000016514	sf1	57	92.077	ENSPFOG00000013683	sf1	61	92.077	Poecilia_formosa
ENSACIG00000016514	sf1	62	78.043	ENSPPYG00000003098	-	58	82.713	Pongo_abelii
ENSACIG00000016514	sf1	62	78.043	ENSPCOG00000027546	SF1	89	82.493	Propithecus_coquereli
ENSACIG00000016514	sf1	100	91.056	ENSPNYG00000004673	sf1	100	91.056	Pundamilia_nyererei
ENSACIG00000016514	sf1	62	78.282	ENSRNOG00000021085	Sf1	58	83.245	Rattus_norvegicus
ENSACIG00000016514	sf1	62	78.043	ENSRBIG00000042818	SF1	89	82.713	Rhinopithecus_bieti
ENSACIG00000016514	sf1	61	78.780	ENSRROG00000045655	SF1	88	83.651	Rhinopithecus_roxellana
ENSACIG00000016514	sf1	83	64.931	ENSSBOG00000022267	-	84	73.837	Saimiri_boliviensis_boliviensis
ENSACIG00000016514	sf1	73	71.368	ENSSHAG00000006841	SF1	69	83.558	Sarcophilus_harrisii
ENSACIG00000016514	sf1	70	76.667	ENSSFOG00015021978	sf1	66	77.925	Scleropages_formosus
ENSACIG00000016514	sf1	84	85.198	ENSSMAG00000007549	sf1	70	84.934	Scophthalmus_maximus
ENSACIG00000016514	sf1	66	87.090	ENSSLDG00000013075	sf1	68	87.090	Seriola_lalandi_dorsalis
ENSACIG00000016514	sf1	61	74.390	ENSSARG00000008180	SF1	71	79.019	Sorex_araneus
ENSACIG00000016514	sf1	61	80.851	ENSSPUG00000012907	SF1	58	86.207	Sphenodon_punctatus
ENSACIG00000016514	sf1	62	76.291	ENSSSCG00000013021	SF1	58	83.245	Sus_scrofa
ENSACIG00000016514	sf1	76	71.212	ENSTNIG00000004820	sf1	73	77.344	Tetraodon_nigroviridis
ENSACIG00000016514	sf1	62	71.014	ENSTBEG00000013133	SF1	62	69.746	Tupaia_belangeri
ENSACIG00000016514	sf1	61	80.149	ENSUMAG00000007268	SF1	71	82.667	Ursus_maritimus
ENSACIG00000016514	sf1	87	70.833	ENSXETG00000008434	sf1	62	85.070	Xenopus_tropicalis
ENSACIG00000016514	sf1	55	93.277	ENSXCOG00000003704	sf1	68	93.258	Xiphophorus_couchianus
ENSACIG00000016514	sf1	66	85.777	ENSXMAG00000007822	sf1	70	85.746	Xiphophorus_maculatus