EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000016568 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 5062 bases
Position: chrCCOE01001114.1:20183-25244
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000021390	RRM_1	PF00076.22	2.9e-13	1	1
ENSACIP00000021382	RRM_1	PF00076.22	3.1e-13	1	1
ENSACIP00000021373	RRM_1	PF00076.22	3.7e-13	1	1
ENSACIP00000021398	RRM_1	PF00076.22	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000021943	-	798	-	ENSACIP00000021390	265 (aa)	-	-
ENSACIT00000021935	-	924	-	ENSACIP00000021382	307 (aa)	-	-
ENSACIT00000021926	-	924	-	ENSACIP00000021373	307 (aa)	-	-
ENSACIT00000021951	-	1041	-	ENSACIP00000021398	346 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000016568	-	80	52.535	ENSACIG00000024288	raly	81	53.488
ENSACIG00000016568	-	92	78.656	ENSACIG00000000270	-	99	76.103
ENSACIG00000016568	-	99	50.923	ENSACIG00000007143	-	76	54.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016568	-	99	50.373	ENSG00000184672	RALYL	93	77.215	Homo_sapiens
ENSACIG00000016568	-	90	81.781	ENSAPOG00000006963	hnrnpc	96	73.986	Acanthochromis_polyacanthus
ENSACIG00000016568	-	99	91.883	ENSAOCG00000021616	-	97	91.346	Amphiprion_ocellaris
ENSACIG00000016568	-	90	81.377	ENSAOCG00000003896	-	96	73.311	Amphiprion_ocellaris
ENSACIG00000016568	-	100	82.313	ENSAPEG00000019962	-	100	81.633	Amphiprion_percula
ENSACIG00000016568	-	90	81.377	ENSAPEG00000001489	-	96	73.311	Amphiprion_percula
ENSACIG00000016568	-	89	91.176	ENSATEG00000018006	-	100	87.546	Anabas_testudineus
ENSACIG00000016568	-	92	78.884	ENSATEG00000011734	-	99	76.623	Anabas_testudineus
ENSACIG00000016568	-	97	48.727	ENSAPLG00000015574	RALYL	78	54.545	Anas_platyrhynchos
ENSACIG00000016568	-	79	54.867	ENSACAG00000028464	RALYL	82	52.263	Anolis_carolinensis
ENSACIG00000016568	-	99	50.373	ENSANAG00000023383	RALYL	81	54.545	Aotus_nancymaae
ENSACIG00000016568	-	83	96.498	ENSACLG00000005707	-	97	94.097	Astatotilapia_calliptera
ENSACIG00000016568	-	90	78.543	ENSACLG00000013636	-	85	80.545	Astatotilapia_calliptera
ENSACIG00000016568	-	89	79.268	ENSACLG00000000995	-	98	73.723	Astatotilapia_calliptera
ENSACIG00000016568	-	91	77.733	ENSAMXG00000034915	zgc:55733	87	75.984	Astyanax_mexicanus
ENSACIG00000016568	-	75	78.788	ENSAMXG00000042946	hnrnpc	98	76.440	Astyanax_mexicanus
ENSACIG00000016568	-	99	50.373	ENSCJAG00000000402	RALYL	81	54.545	Callithrix_jacchus
ENSACIG00000016568	-	97	48.708	ENSCPOG00000012314	RALYL	83	51.429	Cavia_porcellus
ENSACIG00000016568	-	99	50.373	ENSCCAG00000025003	RALYL	77	77.215	Cebus_capucinus
ENSACIG00000016568	-	99	50.373	ENSCATG00000042145	RALYL	81	54.545	Cercocebus_atys
ENSACIG00000016568	-	99	47.500	ENSCLAG00000005228	RALYL	82	51.653	Chinchilla_lanigera
ENSACIG00000016568	-	79	53.982	ENSCHOG00000013228	RALYL	76	52.174	Choloepus_hoffmanni
ENSACIG00000016568	-	99	50.373	ENSCANG00000039144	RALYL	81	54.545	Colobus_angolensis_palliatus
ENSACIG00000016568	-	99	47.482	ENSCGRG00001009241	Ralyl	82	51.029	Cricetulus_griseus_chok1gshd
ENSACIG00000016568	-	99	63.051	ENSCSEG00000019769	-	74	75.000	Cynoglossus_semilaevis
ENSACIG00000016568	-	85	87.879	ENSCSEG00000021349	-	97	74.013	Cynoglossus_semilaevis
ENSACIG00000016568	-	96	60.448	ENSCVAG00000002797	-	99	55.254	Cyprinodon_variegatus
ENSACIG00000016568	-	99	85.256	ENSCVAG00000016981	-	97	85.443	Cyprinodon_variegatus
ENSACIG00000016568	-	84	86.099	ENSDARG00000103845	zgc:55733	99	71.025	Danio_rerio
ENSACIG00000016568	-	82	83.028	ENSDARG00000053810	hnrnpc	96	74.267	Danio_rerio
ENSACIG00000016568	-	99	47.687	ENSDORG00000003721	Ralyl	82	51.852	Dipodomys_ordii
ENSACIG00000016568	-	61	55.747	ENSETEG00000014028	RALYL	82	59.877	Echinops_telfairi
ENSACIG00000016568	-	83	49.554	ENSEBUG00000006049	RALYL	78	47.297	Eptatretus_burgeri
ENSACIG00000016568	-	92	45.420	ENSEBUG00000012363	hnrnpc	79	37.993	Eptatretus_burgeri
ENSACIG00000016568	-	99	47.687	ENSEEUG00000007202	RALYL	83	51.653	Erinaceus_europaeus
ENSACIG00000016568	-	99	78.387	ENSELUG00000004132	-	99	77.097	Esox_lucius
ENSACIG00000016568	-	83	81.277	ENSELUG00000007714	-	99	71.378	Esox_lucius
ENSACIG00000016568	-	99	48.746	ENSFALG00000008647	RALYL	97	57.477	Ficedula_albicollis
ENSACIG00000016568	-	95	72.830	ENSFHEG00000003605	-	84	76.357	Fundulus_heteroclitus
ENSACIG00000016568	-	100	82.317	ENSFHEG00000007278	-	100	81.098	Fundulus_heteroclitus
ENSACIG00000016568	-	78	59.155	ENSGALG00000036938	RALYL	77	54.545	Gallus_gallus
ENSACIG00000016568	-	90	76.786	ENSGAFG00000020486	-	99	69.118	Gambusia_affinis
ENSACIG00000016568	-	100	87.179	ENSGAFG00000020992	-	100	88.141	Gambusia_affinis
ENSACIG00000016568	-	82	75.576	ENSGACG00000018932	-	87	70.046	Gasterosteus_aculeatus
ENSACIG00000016568	-	100	80.251	ENSGACG00000017772	-	97	89.683	Gasterosteus_aculeatus
ENSACIG00000016568	-	99	50.373	ENSGGOG00000000841	RALYL	81	54.545	Gorilla_gorilla
ENSACIG00000016568	-	98	69.759	ENSHBUG00000018342	-	99	66.964	Haplochromis_burtoni
ENSACIG00000016568	-	100	96.117	ENSHBUG00000010527	-	97	96.117	Haplochromis_burtoni
ENSACIG00000016568	-	99	47.143	ENSHGLG00000004866	RALYL	82	51.240	Heterocephalus_glaber_female
ENSACIG00000016568	-	99	47.143	ENSHGLG00100017480	RALYL	82	51.240	Heterocephalus_glaber_male
ENSACIG00000016568	-	81	89.035	ENSHCOG00000012333	hnrnpc	87	86.891	Hippocampus_comes
ENSACIG00000016568	-	92	79.098	ENSIPUG00000011271	hnrnpc	98	79.646	Ictalurus_punctatus
ENSACIG00000016568	-	86	81.116	ENSIPUG00000008666	zgc:55733	94	80.000	Ictalurus_punctatus
ENSACIG00000016568	-	99	47.331	ENSSTOG00000012583	RALYL	83	51.029	Ictidomys_tridecemlineatus
ENSACIG00000016568	-	96	73.408	ENSKMAG00000011170	-	99	69.395	Kryptolebias_marmoratus
ENSACIG00000016568	-	99	88.925	ENSKMAG00000018265	-	97	87.460	Kryptolebias_marmoratus
ENSACIG00000016568	-	100	86.688	ENSLBEG00000006193	-	97	84.691	Labrus_bergylta
ENSACIG00000016568	-	99	68.978	ENSLBEG00000024418	-	86	73.384	Labrus_bergylta
ENSACIG00000016568	-	89	77.899	ENSLBEG00000006979	-	85	77.510	Labrus_bergylta
ENSACIG00000016568	-	83	71.863	ENSLOCG00000002560	hnrnpc	89	71.103	Lepisosteus_oculatus
ENSACIG00000016568	-	99	50.373	ENSMNEG00000033288	RALYL	81	54.545	Macaca_nemestrina
ENSACIG00000016568	-	99	50.373	ENSMLEG00000038284	RALYL	81	54.545	Mandrillus_leucophaeus
ENSACIG00000016568	-	92	81.557	ENSMAMG00000012236	-	99	73.448	Mastacembelus_armatus
ENSACIG00000016568	-	100	89.389	ENSMAMG00000008033	-	97	89.068	Mastacembelus_armatus
ENSACIG00000016568	-	100	95.793	ENSMZEG00005024249	-	97	95.793	Maylandia_zebra
ENSACIG00000016568	-	92	79.352	ENSMZEG00005020460	-	88	78.544	Maylandia_zebra
ENSACIG00000016568	-	99	47.482	ENSMAUG00000015149	Ralyl	82	51.029	Mesocricetus_auratus
ENSACIG00000016568	-	99	49.442	ENSMICG00000005558	RALYL	86	74.118	Microcebus_murinus
ENSACIG00000016568	-	99	48.772	ENSMOCG00000017371	Ralyl	82	51.029	Microtus_ochrogaster
ENSACIG00000016568	-	83	87.330	ENSMMOG00000021465	-	89	82.422	Mola_mola
ENSACIG00000016568	-	99	85.551	ENSMMOG00000019520	-	100	84.589	Mola_mola
ENSACIG00000016568	-	80	82.075	ENSMALG00000007520	-	99	69.965	Monopterus_albus
ENSACIG00000016568	-	83	89.804	ENSMALG00000014623	-	81	90.196	Monopterus_albus
ENSACIG00000016568	-	99	47.122	ENSMUSG00000039717	Ralyl	93	75.949	Mus_musculus
ENSACIG00000016568	-	99	48.754	ENSMPUG00000010724	RALYL	82	51.029	Mustela_putorius_furo
ENSACIG00000016568	-	99	47.122	ENSNGAG00000013375	Ralyl	82	50.617	Nannospalax_galili
ENSACIG00000016568	-	92	78.884	ENSNBRG00000004912	-	94	80.263	Neolamprologus_brichardi
ENSACIG00000016568	-	100	96.452	ENSNBRG00000015676	-	97	96.452	Neolamprologus_brichardi
ENSACIG00000016568	-	99	50.373	ENSNLEG00000002702	RALYL	77	54.545	Nomascus_leucogenys
ENSACIG00000016568	-	67	50.259	ENSOPRG00000013650	-	100	48.731	Ochotona_princeps
ENSACIG00000016568	-	99	47.143	ENSODEG00000001012	RALYL	82	51.240	Octodon_degus
ENSACIG00000016568	-	90	79.757	ENSONIG00000007859	-	91	82.264	Oreochromis_niloticus
ENSACIG00000016568	-	100	97.087	ENSONIG00000018350	-	97	97.087	Oreochromis_niloticus
ENSACIG00000016568	-	90	68.273	ENSORLG00000009999	-	83	70.656	Oryzias_latipes
ENSACIG00000016568	-	99	86.792	ENSORLG00000003144	-	97	87.267	Oryzias_latipes
ENSACIG00000016568	-	90	67.871	ENSORLG00020018228	hnrnpc	83	70.270	Oryzias_latipes_hni
ENSACIG00000016568	-	90	68.273	ENSORLG00015019755	-	83	70.656	Oryzias_latipes_hsok
ENSACIG00000016568	-	99	86.562	ENSORLG00015009460	-	97	87.037	Oryzias_latipes_hsok
ENSACIG00000016568	-	99	89.902	ENSOMEG00000022665	-	97	90.354	Oryzias_melastigma
ENSACIG00000016568	-	90	69.478	ENSOMEG00000020488	-	96	63.545	Oryzias_melastigma
ENSACIG00000016568	-	99	50.373	ENSPPAG00000038705	RALYL	81	54.545	Pan_paniscus
ENSACIG00000016568	-	99	51.661	ENSPPRG00000018612	RALYL	81	54.077	Panthera_pardus
ENSACIG00000016568	-	99	51.661	ENSPTIG00000020331	RALYL	81	54.077	Panthera_tigris_altaica
ENSACIG00000016568	-	99	50.373	ENSPTRG00000020381	RALYL	81	54.545	Pan_troglodytes
ENSACIG00000016568	-	99	50.373	ENSPANG00000029305	RALYL	81	54.545	Papio_anubis
ENSACIG00000016568	-	96	75.862	ENSPKIG00000008592	-	97	72.611	Paramormyrops_kingsleyae
ENSACIG00000016568	-	81	86.111	ENSPKIG00000022837	-	96	80.192	Paramormyrops_kingsleyae
ENSACIG00000016568	-	97	49.270	ENSPSIG00000011135	RALYL	77	54.545	Pelodiscus_sinensis
ENSACIG00000016568	-	99	61.364	ENSPMGG00000017774	-	96	68.214	Periophthalmus_magnuspinnatus
ENSACIG00000016568	-	99	87.266	ENSPMGG00000013144	-	99	83.895	Periophthalmus_magnuspinnatus
ENSACIG00000016568	-	99	47.482	ENSPEMG00000016447	Ralyl	82	51.029	Peromyscus_maniculatus_bairdii
ENSACIG00000016568	-	79	53.744	ENSPMAG00000002407	RALYL	97	53.333	Petromyzon_marinus
ENSACIG00000016568	-	99	87.662	ENSPFOG00000002643	-	97	88.141	Poecilia_formosa
ENSACIG00000016568	-	90	77.061	ENSPFOG00000001583	-	96	71.429	Poecilia_formosa
ENSACIG00000016568	-	99	87.702	ENSPLAG00000000061	-	97	85.942	Poecilia_latipinna
ENSACIG00000016568	-	90	75.627	ENSPLAG00000015305	-	96	70.130	Poecilia_latipinna
ENSACIG00000016568	-	99	87.013	ENSPMEG00000016524	-	97	87.500	Poecilia_mexicana
ENSACIG00000016568	-	90	78.571	ENSPMEG00000004802	-	96	71.429	Poecilia_mexicana
ENSACIG00000016568	-	89	85.306	ENSPREG00000001852	-	85	90.980	Poecilia_reticulata
ENSACIG00000016568	-	82	78.346	ENSPREG00000007928	-	96	65.763	Poecilia_reticulata
ENSACIG00000016568	-	86	45.852	ENSPPYG00000018710	-	72	72.115	Pongo_abelii
ENSACIG00000016568	-	86	48.571	ENSPVAG00000010821	RALYL	79	53.191	Pteropus_vampyrus
ENSACIG00000016568	-	99	90.681	ENSPNYG00000003747	-	97	94.444	Pundamilia_nyererei
ENSACIG00000016568	-	92	79.283	ENSPNYG00000020293	-	87	80.934	Pundamilia_nyererei
ENSACIG00000016568	-	82	84.793	ENSPNAG00000015686	hnrnpc	86	80.784	Pygocentrus_nattereri
ENSACIG00000016568	-	91	73.171	ENSPNAG00000019200	zgc:55733	83	75.000	Pygocentrus_nattereri
ENSACIG00000016568	-	99	50.373	ENSRROG00000023925	RALYL	82	75.309	Rhinopithecus_roxellana
ENSACIG00000016568	-	90	77.273	ENSSFOG00015012924	-	80	97.468	Scleropages_formosus
ENSACIG00000016568	-	99	79.545	ENSSFOG00015012015	-	99	79.167	Scleropages_formosus
ENSACIG00000016568	-	82	82.488	ENSSMAG00000013592	-	96	74.351	Scophthalmus_maximus
ENSACIG00000016568	-	99	87.823	ENSSMAG00000011147	-	99	86.716	Scophthalmus_maximus
ENSACIG00000016568	-	96	76.923	ENSSDUG00000001723	-	96	76.547	Seriola_dumerili
ENSACIG00000016568	-	100	87.338	ENSSDUG00000006730	-	97	87.662	Seriola_dumerili
ENSACIG00000016568	-	91	81.275	ENSSLDG00000007474	-	88	87.891	Seriola_lalandi_dorsalis
ENSACIG00000016568	-	93	77.992	ENSSLDG00000007454	-	83	82.879	Seriola_lalandi_dorsalis
ENSACIG00000016568	-	55	75.610	ENSSARG00000002374	RALYL	84	43.750	Sorex_araneus
ENSACIG00000016568	-	100	90.554	ENSSPAG00000013996	-	97	91.883	Stegastes_partitus
ENSACIG00000016568	-	95	76.426	ENSSPAG00000023204	-	96	74.662	Stegastes_partitus
ENSACIG00000016568	-	99	49.104	ENSTGUG00000011689	RALYL	79	54.545	Taeniopygia_guttata
ENSACIG00000016568	-	82	87.558	ENSTRUG00000020158	-	99	73.529	Takifugu_rubripes
ENSACIG00000016568	-	91	72.510	ENSTNIG00000000334	-	94	77.395	Tetraodon_nigroviridis
ENSACIG00000016568	-	79	83.568	ENSTNIG00000007427	-	84	78.077	Tetraodon_nigroviridis
ENSACIG00000016568	-	79	49.561	ENSTBEG00000005551	RALYL	89	49.345	Tupaia_belangeri
ENSACIG00000016568	-	99	45.423	ENSTTRG00000015762	RALYL	79	53.043	Tursiops_truncatus
ENSACIG00000016568	-	99	46.840	ENSVPAG00000008501	RALYL	81	50.431	Vicugna_pacos
ENSACIG00000016568	-	97	64.706	ENSXCOG00000006552	-	82	70.039	Xiphophorus_couchianus
ENSACIG00000016568	-	58	89.571	ENSXCOG00000019434	-	100	67.883	Xiphophorus_couchianus
ENSACIG00000016568	-	90	76.786	ENSXMAG00000009333	-	96	69.805	Xiphophorus_maculatus
ENSACIG00000016568	-	82	92.032	ENSXMAG00000022849	-	83	90.980	Xiphophorus_maculatus