EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000016779 (Gene tree)
Gene ID: -
Gene Symbol: patz1
Alias: -
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 11280 bases
Position: chrCCOE01001741.1:841608-852887
Accession: ZDB-GENE-111223-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000021665	zf-C2H2	PF00096.26	2.1e-30	1	5
ENSACIP00000021665	zf-C2H2	PF00096.26	2.1e-30	2	5
ENSACIP00000021665	zf-C2H2	PF00096.26	2.1e-30	3	5
ENSACIP00000021665	zf-C2H2	PF00096.26	2.1e-30	4	5
ENSACIP00000021665	zf-C2H2	PF00096.26	2.1e-30	5	5
ENSACIP00000021653	zf-C2H2	PF00096.26	4.9e-30	1	5
ENSACIP00000021653	zf-C2H2	PF00096.26	4.9e-30	2	5
ENSACIP00000021653	zf-C2H2	PF00096.26	4.9e-30	3	5
ENSACIP00000021653	zf-C2H2	PF00096.26	4.9e-30	4	5
ENSACIP00000021653	zf-C2H2	PF00096.26	4.9e-30	5	5
ENSACIP00000021653	zf-met	PF12874.7	2e-06	1	1
ENSACIP00000021665	zf-met	PF12874.7	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000022232	-	1959	-	ENSACIP00000021665	652 (aa)	-	-
ENSACIT00000022220	-	2154	-	ENSACIP00000021653	717 (aa)	-	-

Gene Model

Click here to download ENSACIG00000016779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000016779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000016779	patz1	55	32.222	ENSACIG00000000360	si:ch211-241b2.1	87	34.161
ENSACIG00000016779	patz1	50	30.292	ENSACIG00000019815	-	85	33.077
ENSACIG00000016779	patz1	52	32.484	ENSACIG00000013149	-	90	30.769
ENSACIG00000016779	patz1	54	36.601	ENSACIG00000003556	-	68	36.601
ENSACIG00000016779	patz1	51	34.649	ENSACIG00000019791	-	95	32.895
ENSACIG00000016779	patz1	60	39.130	ENSACIG00000016182	-	89	39.130
ENSACIG00000016779	patz1	57	36.614	ENSACIG00000011541	-	69	35.556
ENSACIG00000016779	patz1	63	32.558	ENSACIG00000012263	znf319b	84	32.558
ENSACIG00000016779	patz1	61	33.333	ENSACIG00000023049	znf646	98	35.000
ENSACIG00000016779	patz1	53	30.508	ENSACIG00000016117	-	85	36.098
ENSACIG00000016779	patz1	65	37.349	ENSACIG00000003247	zbtb49	50	37.349
ENSACIG00000016779	patz1	51	33.019	ENSACIG00000018835	hic2	72	32.168
ENSACIG00000016779	patz1	69	32.353	ENSACIG00000006854	zbtb16b	60	32.353
ENSACIG00000016779	patz1	51	31.351	ENSACIG00000021986	-	90	33.175
ENSACIG00000016779	patz1	51	33.333	ENSACIG00000004096	PRDM15	50	33.333
ENSACIG00000016779	patz1	64	35.507	ENSACIG00000003515	-	93	35.507
ENSACIG00000016779	patz1	52	36.000	ENSACIG00000011153	-	68	41.071
ENSACIG00000016779	patz1	50	31.308	ENSACIG00000001767	zbtb41	62	31.308
ENSACIG00000016779	patz1	52	33.529	ENSACIG00000006806	-	60	33.529
ENSACIG00000016779	patz1	66	31.636	ENSACIG00000000406	prdm5	73	32.515
ENSACIG00000016779	patz1	64	35.057	ENSACIG00000017647	-	91	35.242
ENSACIG00000016779	patz1	70	34.615	ENSACIG00000015429	-	81	34.483
ENSACIG00000016779	patz1	65	32.323	ENSACIG00000004041	-	93	34.653
ENSACIG00000016779	patz1	54	32.159	ENSACIG00000004745	-	86	37.853
ENSACIG00000016779	patz1	52	35.429	ENSACIG00000010739	-	79	35.429
ENSACIG00000016779	patz1	54	32.530	ENSACIG00000019447	-	66	36.957
ENSACIG00000016779	patz1	87	32.301	ENSACIG00000004753	-	71	32.830
ENSACIG00000016779	patz1	63	32.000	ENSACIG00000014282	znf526	58	32.000
ENSACIG00000016779	patz1	50	33.610	ENSACIG00000023794	-	79	33.610
ENSACIG00000016779	patz1	67	33.679	ENSACIG00000018440	-	95	39.773
ENSACIG00000016779	patz1	52	36.047	ENSACIG00000010637	-	50	36.047
ENSACIG00000016779	patz1	56	34.320	ENSACIG00000009717	-	85	31.148
ENSACIG00000016779	patz1	71	39.091	ENSACIG00000016331	ZBTB14	91	33.571
ENSACIG00000016779	patz1	53	34.211	ENSACIG00000022738	-	92	33.690
ENSACIG00000016779	patz1	53	33.803	ENSACIG00000010647	-	97	35.417
ENSACIG00000016779	patz1	63	36.413	ENSACIG00000004666	-	97	38.182
ENSACIG00000016779	patz1	51	36.111	ENSACIG00000014123	znf236	60	36.111
ENSACIG00000016779	patz1	65	39.086	ENSACIG00000013604	-	96	34.078
ENSACIG00000016779	patz1	63	32.105	ENSACIG00000023212	-	87	32.105
ENSACIG00000016779	patz1	55	34.132	ENSACIG00000007844	bcl6aa	52	32.031
ENSACIG00000016779	patz1	52	35.526	ENSACIG00000022293	-	94	39.267
ENSACIG00000016779	patz1	51	34.615	ENSACIG00000023313	-	87	36.527
ENSACIG00000016779	patz1	54	33.600	ENSACIG00000022009	bcl6ab	50	33.600
ENSACIG00000016779	patz1	73	31.111	ENSACIG00000012478	zbtb16a	60	31.148
ENSACIG00000016779	patz1	50	33.714	ENSACIG00000020938	zbtb47b	71	33.714
ENSACIG00000016779	patz1	56	35.652	ENSACIG00000006172	-	96	34.335
ENSACIG00000016779	patz1	70	33.495	ENSACIG00000017050	-	95	40.476
ENSACIG00000016779	patz1	50	31.387	ENSACIG00000019710	-	73	36.517
ENSACIG00000016779	patz1	50	36.364	ENSACIG00000000286	-	69	36.364
ENSACIG00000016779	patz1	65	37.234	ENSACIG00000021012	zbtb34	84	37.234
ENSACIG00000016779	patz1	52	36.842	ENSACIG00000020982	znf710b	58	32.105
ENSACIG00000016779	patz1	57	43.750	ENSACIG00000016645	bcl6b	63	43.750
ENSACIG00000016779	patz1	50	37.255	ENSACIG00000003754	-	82	37.255
ENSACIG00000016779	patz1	50	32.222	ENSACIG00000017683	-	85	31.944
ENSACIG00000016779	patz1	54	32.000	ENSACIG00000011516	-	83	32.000
ENSACIG00000016779	patz1	59	30.837	ENSACIG00000013163	-	87	30.837

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000016779	patz1	100	59.961	ENSG00000100105	PATZ1	100	60.232	Homo_sapiens
ENSACIG00000016779	patz1	100	91.773	ENSAPOG00000018447	patz1	100	84.903	Acanthochromis_polyacanthus
ENSACIG00000016779	patz1	100	58.807	ENSAMEG00000007074	PATZ1	100	58.807	Ailuropoda_melanoleuca
ENSACIG00000016779	patz1	100	86.510	ENSAPEG00000013354	patz1	100	86.510	Amphiprion_percula
ENSACIG00000016779	patz1	100	92.830	ENSATEG00000011260	patz1	100	89.537	Anabas_testudineus
ENSACIG00000016779	patz1	88	57.095	ENSAPLG00000003934	PATZ1	99	57.095	Anas_platyrhynchos
ENSACIG00000016779	patz1	100	59.961	ENSANAG00000029603	PATZ1	100	60.232	Aotus_nancymaae
ENSACIG00000016779	patz1	99	89.116	ENSAMXG00000002273	patz1	100	69.501	Astyanax_mexicanus
ENSACIG00000016779	patz1	100	59.961	ENSBTAG00000005478	PATZ1	100	60.232	Bos_taurus
ENSACIG00000016779	patz1	100	59.961	ENSCJAG00000010978	PATZ1	100	60.232	Callithrix_jacchus
ENSACIG00000016779	patz1	100	59.961	ENSCAFG00000013087	PATZ1	99	60.232	Canis_familiaris
ENSACIG00000016779	patz1	100	59.961	ENSCHIG00000020203	PATZ1	100	60.232	Capra_hircus
ENSACIG00000016779	patz1	100	59.961	ENSTSYG00000033183	PATZ1	100	60.232	Carlito_syrichta
ENSACIG00000016779	patz1	100	59.961	ENSCCAG00000028772	PATZ1	100	60.232	Cebus_capucinus
ENSACIG00000016779	patz1	100	59.961	ENSCATG00000006101	PATZ1	100	59.961	Cercocebus_atys
ENSACIG00000016779	patz1	100	57.022	ENSCPBG00000011277	PATZ1	100	57.444	Chrysemys_picta_bellii
ENSACIG00000016779	patz1	100	59.961	ENSCANG00000024972	PATZ1	100	59.961	Colobus_angolensis_palliatus
ENSACIG00000016779	patz1	100	56.633	ENSCGRG00001004071	Patz1	100	56.919	Cricetulus_griseus_chok1gshd
ENSACIG00000016779	patz1	94	58.140	ENSCGRG00000004814	Patz1	100	57.078	Cricetulus_griseus_crigri
ENSACIG00000016779	patz1	100	81.536	ENSCSEG00000001385	patz1	100	81.832	Cynoglossus_semilaevis
ENSACIG00000016779	patz1	100	83.780	ENSCVAG00000007684	patz1	100	85.000	Cyprinodon_variegatus
ENSACIG00000016779	patz1	100	67.742	ENSDARG00000076584	patz1	100	67.742	Danio_rerio
ENSACIG00000016779	patz1	89	58.095	ENSDNOG00000003183	PATZ1	100	58.095	Dasypus_novemcinctus
ENSACIG00000016779	patz1	100	60.155	ENSDORG00000023834	Patz1	100	60.425	Dipodomys_ordii
ENSACIG00000016779	patz1	100	59.961	ENSECAG00000025030	PATZ1	100	60.232	Equus_caballus
ENSACIG00000016779	patz1	100	74.731	ENSELUG00000002333	patz1	100	69.576	Esox_lucius
ENSACIG00000016779	patz1	100	59.961	ENSFCAG00000030253	PATZ1	100	60.232	Felis_catus
ENSACIG00000016779	patz1	88	57.190	ENSFALG00000007450	PATZ1	100	57.190	Ficedula_albicollis
ENSACIG00000016779	patz1	96	55.687	ENSFDAG00000005614	PATZ1	100	55.835	Fukomys_damarensis
ENSACIG00000016779	patz1	100	80.477	ENSFHEG00000014755	patz1	100	86.000	Fundulus_heteroclitus
ENSACIG00000016779	patz1	100	67.842	ENSGMOG00000001062	patz1	100	68.124	Gadus_morhua
ENSACIG00000016779	patz1	100	56.620	ENSGALG00000006934	PATZ1	100	57.103	Gallus_gallus
ENSACIG00000016779	patz1	100	82.927	ENSGAFG00000010053	patz1	100	81.818	Gambusia_affinis
ENSACIG00000016779	patz1	87	57.355	ENSGAGG00000003214	PATZ1	100	57.355	Gopherus_agassizii
ENSACIG00000016779	patz1	100	59.961	ENSGGOG00000017171	PATZ1	100	60.232	Gorilla_gorilla
ENSACIG00000016779	patz1	99	78.512	ENSHCOG00000017644	patz1	99	76.115	Hippocampus_comes
ENSACIG00000016779	patz1	100	70.037	ENSIPUG00000017653	patz1	99	67.833	Ictalurus_punctatus
ENSACIG00000016779	patz1	100	59.768	ENSSTOG00000020707	PATZ1	100	60.039	Ictidomys_tridecemlineatus
ENSACIG00000016779	patz1	100	59.160	ENSJJAG00000015259	Patz1	100	58.547	Jaculus_jaculus
ENSACIG00000016779	patz1	100	88.055	ENSKMAG00000008157	patz1	100	88.532	Kryptolebias_marmoratus
ENSACIG00000016779	patz1	100	59.565	ENSLAFG00000002317	PATZ1	100	59.565	Loxodonta_africana
ENSACIG00000016779	patz1	100	60.155	ENSMFAG00000040968	PATZ1	100	60.155	Macaca_fascicularis
ENSACIG00000016779	patz1	100	60.155	ENSMNEG00000037588	PATZ1	100	60.155	Macaca_nemestrina
ENSACIG00000016779	patz1	100	59.961	ENSMLEG00000030938	PATZ1	100	59.961	Mandrillus_leucophaeus
ENSACIG00000016779	patz1	100	85.795	ENSMAMG00000023652	patz1	100	85.795	Mastacembelus_armatus
ENSACIG00000016779	patz1	88	54.333	ENSMGAG00000008439	PATZ1	100	54.333	Meleagris_gallopavo
ENSACIG00000016779	patz1	100	59.768	ENSMAUG00000004129	Patz1	100	59.768	Mesocricetus_auratus
ENSACIG00000016779	patz1	100	59.961	ENSMICG00000005430	PATZ1	100	60.232	Microcebus_murinus
ENSACIG00000016779	patz1	100	59.961	ENSMOCG00000014488	Patz1	100	58.807	Microtus_ochrogaster
ENSACIG00000016779	patz1	99	86.667	ENSMMOG00000021679	patz1	100	83.014	Mola_mola
ENSACIG00000016779	patz1	100	84.320	ENSMALG00000021172	patz1	100	84.320	Monopterus_albus
ENSACIG00000016779	patz1	100	60.155	MGP_CAROLIEiJ_G0016007	Patz1	100	60.425	Mus_caroli
ENSACIG00000016779	patz1	100	60.155	ENSMUSG00000020453	Patz1	100	60.425	Mus_musculus
ENSACIG00000016779	patz1	100	60.155	MGP_PahariEiJ_G0016884	Patz1	100	60.425	Mus_pahari
ENSACIG00000016779	patz1	100	60.155	MGP_SPRETEiJ_G0016846	Patz1	100	60.425	Mus_spretus
ENSACIG00000016779	patz1	100	60.039	ENSMLUG00000009942	PATZ1	100	59.961	Myotis_lucifugus
ENSACIG00000016779	patz1	100	59.961	ENSNGAG00000010268	Patz1	100	60.232	Nannospalax_galili
ENSACIG00000016779	patz1	100	97.071	ENSNBRG00000016032	patz1	100	97.071	Neolamprologus_brichardi
ENSACIG00000016779	patz1	73	64.725	ENSMEUG00000016293	PATZ1	97	58.874	Notamacropus_eugenii
ENSACIG00000016779	patz1	100	59.961	ENSODEG00000003589	PATZ1	100	60.232	Octodon_degus
ENSACIG00000016779	patz1	100	88.283	ENSONIG00000004248	patz1	100	88.283	Oreochromis_niloticus
ENSACIG00000016779	patz1	100	58.596	ENSOANG00000014654	PATZ1	100	58.883	Ornithorhynchus_anatinus
ENSACIG00000016779	patz1	100	78.865	ENSORLG00020010937	patz1	100	78.865	Oryzias_latipes_hni
ENSACIG00000016779	patz1	100	79.090	ENSORLG00015007396	patz1	100	79.090	Oryzias_latipes_hsok
ENSACIG00000016779	patz1	100	83.425	ENSOMEG00000006636	patz1	100	83.425	Oryzias_melastigma
ENSACIG00000016779	patz1	100	58.890	ENSOGAG00000027905	PATZ1	100	59.091	Otolemur_garnettii
ENSACIG00000016779	patz1	100	59.961	ENSPPAG00000033227	PATZ1	100	60.232	Pan_paniscus
ENSACIG00000016779	patz1	100	59.961	ENSPPRG00000001573	PATZ1	100	60.232	Panthera_pardus
ENSACIG00000016779	patz1	88	58.706	ENSPTIG00000007937	PATZ1	91	58.649	Panthera_tigris_altaica
ENSACIG00000016779	patz1	100	59.961	ENSPTRG00000014268	PATZ1	100	60.232	Pan_troglodytes
ENSACIG00000016779	patz1	100	59.961	ENSPANG00000006821	PATZ1	100	58.807	Papio_anubis
ENSACIG00000016779	patz1	100	69.982	ENSPKIG00000019584	patz1	100	69.941	Paramormyrops_kingsleyae
ENSACIG00000016779	patz1	69	74.107	ENSPSIG00000011562	-	100	74.107	Pelodiscus_sinensis
ENSACIG00000016779	patz1	71	56.582	ENSPSIG00000016553	-	93	56.582	Pelodiscus_sinensis
ENSACIG00000016779	patz1	100	76.953	ENSPMGG00000010196	patz1	100	75.735	Periophthalmus_magnuspinnatus
ENSACIG00000016779	patz1	100	59.961	ENSPEMG00000005321	Patz1	100	59.961	Peromyscus_maniculatus_bairdii
ENSACIG00000016779	patz1	100	81.818	ENSPLAG00000010425	patz1	100	81.818	Poecilia_latipinna
ENSACIG00000016779	patz1	100	81.818	ENSPMEG00000000255	patz1	100	81.818	Poecilia_mexicana
ENSACIG00000016779	patz1	100	79.340	ENSPREG00000002440	patz1	100	79.340	Poecilia_reticulata
ENSACIG00000016779	patz1	100	58.807	ENSPPYG00000011732	PATZ1	100	59.007	Pongo_abelii
ENSACIG00000016779	patz1	100	59.961	ENSPCOG00000019729	PATZ1	100	60.232	Propithecus_coquereli
ENSACIG00000016779	patz1	100	58.606	ENSPVAG00000001749	PATZ1	100	58.807	Pteropus_vampyrus
ENSACIG00000016779	patz1	100	90.789	ENSPNYG00000013542	patz1	100	90.789	Pundamilia_nyererei
ENSACIG00000016779	patz1	87	62.903	ENSPNAG00000017222	patz1	100	62.903	Pygocentrus_nattereri
ENSACIG00000016779	patz1	100	59.961	ENSRBIG00000044231	PATZ1	100	59.961	Rhinopithecus_bieti
ENSACIG00000016779	patz1	100	59.961	ENSRROG00000037155	PATZ1	100	59.961	Rhinopithecus_roxellana
ENSACIG00000016779	patz1	100	59.961	ENSSBOG00000003894	PATZ1	100	60.232	Saimiri_boliviensis_boliviensis
ENSACIG00000016779	patz1	79	91.304	ENSSFOG00015013244	patz1	78	91.304	Scleropages_formosus
ENSACIG00000016779	patz1	99	58.792	ENSSPUG00000015298	PATZ1	97	56.776	Sphenodon_punctatus
ENSACIG00000016779	patz1	89	60.437	ENSSSCG00000010027	PATZ1	100	60.437	Sus_scrofa
ENSACIG00000016779	patz1	100	82.302	ENSTRUG00000015366	patz1	100	82.302	Takifugu_rubripes
ENSACIG00000016779	patz1	100	58.464	ENSTTRG00000010279	PATZ1	100	58.665	Tursiops_truncatus
ENSACIG00000016779	patz1	100	59.961	ENSUAMG00000015014	PATZ1	100	60.232	Ursus_americanus
ENSACIG00000016779	patz1	100	55.036	ENSXETG00000004190	patz1	100	55.783	Xenopus_tropicalis
ENSACIG00000016779	patz1	100	85.366	ENSXMAG00000015531	patz1	100	81.818	Xiphophorus_maculatus